Gchil4349.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil4349.t1
Unique Name	Gchil4349.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	355

Homology

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BLAST of Gchil4349.t1 vs. uniprot
Match: A0A2V3J201_9FLOR (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J201_9FLOR)

HSP 1 Score: 329 bits (844), Expect = 3.260e-107
Identity = 195/358 (54.47%), Postives = 224/358 (62.57%), Query Frame = 0

Query:    1 MSASLSHRASVRLPPVSVA-----CNYRSVRLASTENLNFLPTSASFLDFNDDERLQKLHVSTPSVVDRDACGAPAAPAANGVWHGLSFDDADSFSTFGTLTLENDVPPAPLPPSKEDMPRPVSDESDVPPVTALGRVARHKLDGEVDDGXXXXXXXXXXXXXXXXGCLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRAMAAAEASHTTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGELLLRSRILRRWNVRYASIVHQGYFGAVLLLFRPEGKRALSNMALSNSKMIALSDTAVRRLESRRPNAPLMFELRTSQRTYTFGCHDAHSREFWVNHLSLPGG 353
            M    S+R SVR P V+        + RS RL + ENLNFLP+S+SFLDFNDDERLQKL  +              AP  N +WHGLSFDDADSFSTFGTL  +N VP AP+PP+++ MPRP SDES   P+             + DDG                  LDVPKRIVSRP A+ ALKDLQRAS+TAGRELASSLR MA AE     +                                   +AQGELLLRSRI RRWN+RYASIVHQGYFGAVLLLFRPE +  L ++AL NSKMIAL++TAVRRLES++PN+P MFELRTSQRTYTFGC +A  REFWVNHLSLP G
Sbjct:  133 MPPRFSYRRSVRFPSVNTVPDRPDSSARSFRLVAAENLNFLPSSSSFLDFNDDERLQKLSQNV-------------APQQNPLWHGLSFDDADSFSTFGTL--DNHVPDAPIPPTQDQMPRPNSDESQAAPLPTASSP-------DDDDG-----------------ALDVPKRIVSRPAATGALKDLQRASITAGRELASSLRMMAEAEKKGNVA-------------------------ASVPRAGSVSKAQGELLLRSRIFRRWNLRYASIVHQGYFGAVLLLFRPESRGVLGSIALRNSKMIALTETAVRRLESKKPNSPFMFELRTSQRTYTFGCKEAEGREFWVNHLSLPDG 426

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BLAST of Gchil4349.t1 vs. uniprot
Match: S0F3M0_CHOCR (PH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3M0_CHOCR)

HSP 1 Score: 204 bits (519), Expect = 1.130e-57
Identity = 151/349 (43.27%), Postives = 203/349 (58.17%), Query Frame = 0

Query:   11 VRLPPVSVACNYRSVRLASTENLNFLPTSASFLDFNDDERLQKLHVSTPSVVDRDACGAPAAPAANGVWHGLSFDDADSFSTFGTLT----LENDVPPAPLPPSKEDMPRPVSDESDVP--PVTALGRVARHKLDGEVDDGXXXXXXXXXXXXXXXXGCLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRAMAAAEASHTTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGELLLRSRILRRWNVRYASIVHQGYFGAVLLLFRPEGKRALS---NMALSNSKMIALSDTAVRRLES-RRPNAPLMFELRTSQRTYTFGCHDAHSREFWVNHLS 349
            VR PP S   N R +      +LNFL   +SFLDF+DD RL  L  S+ ++ +    G   APA  G+   +SFD+ADSF TF TL+    +  D+  + LP    D  RP S+ES+ P  P+ +  +  R                 XXXXXXXXXG LDVP R   RPGA++AL+DLQRASVTAG E++++LR  + A+     ++                                  +AQG++LLRSRI RR+N+RYAS+VHQGYFGAVLLLF P+ K  +S     AL +SKMIAL++++VRR+++ R+ N   MFEL+T QRTYTF C+D  SREFW+N+LS
Sbjct:  213 VRSPPKSSFRNSRRLGNEGQSDLNFLQEPSSFLDFDDDSRLTPLD-SSAAMGNGKGAGMGGAPAM-GI---MSFDEADSFDTFATLSKGLKIAQDLKGSILPADVGDDERPGSNESEKPLFPMMSFSKKNRKXX--------------XXXXXXXXXGGLDVPNRFTRRPGAANALRDLQRASVTAGNEISANLRFASNAQEKVKRANTKERVS----------------------------KAQGDILLRSRIFRRFNLRYASLVHQGYFGAVLLLFTPDSKAGISPSGTFALKSSKMIALAESSVRRVDNARKTNQGYMFELKTCQRTYTFACNDEKSREFWINNLS 514

The following BLAST results are available for this feature:

BLAST of Gchil4349.t1 vs. uniprot

BLAST of Gchil4349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J201_9FLOR	3.260e-107	54.47	PH domain-containing protein n=1 Tax=Gracilariopsi...	[more]
S0F3M0_CHOCR	1.130e-57	43.27	PH domain-containing protein n=1 Tax=Chondrus cris...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 229..350 e-value: 1.2E-7 score: 33.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..247
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 241..349
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 245..353 score: 8.9658
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 274..311 score: 7.1106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004373_pilon	contig	tig00004373_pilon:2187430..2188494 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil4349.t1	Gchil4349.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004373_pilon 2187430..2188494 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil4349.t1 ID=Gchil4349.t1|Name=Gchil4349.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=355bp
MSASLSHRASVRLPPVSVACNYRSVRLASTENLNFLPTSASFLDFNDDER
LQKLHVSTPSVVDRDACGAPAAPAANGVWHGLSFDDADSFSTFGTLTLEN
DVPPAPLPPSKEDMPRPVSDESDVPPVTALGRVARHKLDGEVDDGGGGGG
GGGGGGDDDDDGCLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRA
MAAAEASHTTSDSTNKHKHTNNSNNTNDKNSNSNNNSKHRRSESVSQAQG
ELLLRSRILRRWNVRYASIVHQGYFGAVLLLFRPEGKRALSNMALSNSKM
IALSDTAVRRLESRRPNAPLMFELRTSQRTYTFGCHDAHSREFWVNHLSL
PGGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH-like_dom_sf
IPR001849	PH_domain
IPR000595	cNMP-bd_dom