Gchil4316.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4316.t1
Unique NameGchil4316.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length345
Homology
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A2V3ILN4_9FLOR (Type-4 uracil-DNA glycosylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILN4_9FLOR)

HSP 1 Score: 327 bits (837), Expect = 2.960e-107
Identity = 152/199 (76.38%), Postives = 177/199 (88.94%), Query Frame = 0
Query:  146 DEMQFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRPKKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPVSITKARGNWSGGGTEPWMMPVFHPSYLLRNPIRKHDMVTDIEEIRRKYMQVVPHDTLHPLKR 344
            D +QF+SHED +Q LQ ++ DPL+ EGGRIVTYRGS  AK+MIIGEAPGEMEDK+GKPFVGRAG+LLDKIF YGGFDTE Q+Y+TN+VKRRP++NRTPN  EMQYY+PYLL EIRLI+PAI++LAGAVA QA+LG VSI+K RG W GGG E WMMP+FHP+YLLRNPIRKHDMVTDIEEIRRKYMQ++PH+ L PLKR
Sbjct:  160 DAIQFSSHEDYLQTLQSMKGDPLEKEGGRIVTYRGSVKAKMMIIGEAPGEMEDKIGKPFVGRAGQLLDKIFTYGGFDTETQVYITNIVKRRPRQNRTPNTVEMQYYEPYLLGEIRLIKPAIIILAGAVATQAMLGSVSISKVRGQWFGGGEEAWMMPIFHPAYLLRNPIRKHDMVTDIEEIRRKYMQLLPHEKLQPLKR 358          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.510e-57
Identity = 101/198 (51.01%), Postives = 129/198 (65.15%), Query Frame = 0
Query:  149 QFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRPKKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPV-SITKARGNWSGGGTEP------WMMPVFHPSYLLRNPIR-----KHDMVTDIEEIRRKYMQVV 334
            QF  H ++   L  L  DPL+  GGRIV YRG   AKLM++GEAPG MED+ GKPFVGR+G+LLD I    GFD E  +YV+N+V+RRP +NR P  AE+ YY+P+LLEEIRL+ PAI++  G  + +A+L     ITK RG W   GT P      W MP FHPSYLLRNP +     K     D +E+RRKY +++
Sbjct:   56 QFKDHAEMTAALLALTGDPLEPAGGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYVSNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTGRWSMRAVLNERRGITKVRGQWYAPGTTPDLPAATWAMPWFHPSYLLRNPTKDEGGPKWLTWVDAQEVRRKYDELL 253          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.030e-53
Identity = 101/195 (51.79%), Postives = 129/195 (66.15%), Query Frame = 0
Query:  146 DEMQFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRPKKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLG-PVSITKARGNWSG--GGTEPWMMPVFHPSYLLRNPIRKHDMV-----TDIEEIRRKYMQ 332
            +E+QF+S E+L   L  L  DPL+  GGR+V YRG+  AK++++GEAPG  ED+LG P+VGRAG+LLD+I    GFD E+ +Y TNVVKRRP +NR P  AE++YY P LLEE+RL+ P IVV  G  + + LL     ITK RG W    G  E   MP+FHPSYLLRNP RK          D +EIRRK+ +
Sbjct:   21 EEVQFSSFEELASALAGLSGDPLEEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYFTNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTGRFSMRTLLDVKQGITKVRGQWFPLPGLPEIHGMPMFHPSYLLRNPSRKAGSPKSLTWVDAQEIRRKFQE 215          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A3N5V4D9_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5V4D9_9CHLR)

HSP 1 Score: 183 bits (464), Expect = 3.850e-53
Identity = 97/192 (50.52%), Postives = 125/192 (65.10%), Query Frame = 0
Query:  149 QFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRP-----KKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPVSITKARGNWSGGGTEPWMMPVFHPSYLLRNPIR-----KHDMVTDIEEIRRKY 330
            +FAS E ++  L+ ++NDPL   G  +V  RG+  AKL+IIGEAPG  E+  GKPFVGRAG++LDKI     FD EK +Y+TN V R P     K  R P   E++YY+PY+ E IRLI P +++L G VA Q++LG   IT  RG W+  G E W+MP+FHPSYLLRNP R     K  M  DI E+R+KY
Sbjct:   13 KFASLEKVINALKGMKNDPLAEAGTNVVISRGNPNAKLLIIGEAPGPEENIKGKPFVGRAGQMLDKILQAAEFDPEKDVYITNSVFRMPPGEDGKAFRKPTTEEIEYYRPYVFEIIRLIDPHVILLTGNVACQSVLGKTGITSLRGKWTQAG-ERWIMPIFHPSYLLRNPTRDPGSPKALMWEDIREVRKKY 203          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 182 bits (463), Expect = 7.630e-53
Identity = 96/191 (50.26%), Postives = 125/191 (65.45%), Query Frame = 0
Query:  150 FASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRPKKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPV-SITKARGNWSGGGTEPWMMPVFHPSYLLRNPIR-----KHDMVTDIEEIRRKYMQVV 334
            F +H+ L++ L++L  DPL+  GG +V YRG+  AKLM+IGE PG  ED+L KPFVGR+G+LLDKI     FD E  +Y+TNVVKRRP +NR P   E+ +Y PYL EEIRL+ P I++L G  A   +LG    ITK RG W   G   W+MP+FHP+YLLRNP R     K     DI  +R +Y ++V
Sbjct:   27 FPTHQALVEALENLTGDPLEPWGGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYITNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTGRYAMLTILGEKRGITKVRGQWFERGGR-WIMPMFHPAYLLRNPQRTPGSPKALTWDDIRAVRARYDELV 216          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A7Y4RID3_9CHLR (Uracil-DNA glycosylase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A7Y4RID3_9CHLR)

HSP 1 Score: 182 bits (462), Expect = 9.240e-53
Identity = 97/200 (48.50%), Postives = 128/200 (64.00%), Query Frame = 0
Query:  149 QFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRP-----KKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPVSITKARGNWSGGGTEPWMMPVFHPSYLLRNPIR-----KHDMVTDIEEIRRKYMQVVPHDT 338
            QF+S +D++  ++ ++NDPL N G  IV  RG+  AKL+I+GEAPG  E+  GKPFVG AG+LLDKI   G FD EK +Y+TN V R P     K  R PN  E++YY+P++ E IR+I P +++L G VA Q++L    IT  RG W       W MP+FHPSYLLRNP R     K  M  D+ EIRRKY +++  DT
Sbjct:   12 QFSSLDDVLDAIRGMKNDPLANTGMNIVISRGNPKAKLLIVGEAPGPQENIQGKPFVGPAGQLLDKILRAGNFDPEKDVYITNSVFRMPPGDDGKSFRKPNDQEIEYYRPFVFEIIRVINPHVILLTGNVACQSILNKTGITTLRGQWILNNGY-WFMPIFHPSYLLRNPSREPGSPKSMMWNDVREIRRKYDELIMGDT 210          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A363U8T5_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363U8T5_9CHLR)

HSP 1 Score: 181 bits (459), Expect = 2.230e-52
Identity = 94/192 (48.96%), Postives = 128/192 (66.67%), Query Frame = 0
Query:  149 QFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRP-----KKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPVSITKARGNWSGGGTEPWMMPVFHPSYLLRNPIR-----KHDMVTDIEEIRRKY 330
            Q+AS ++L   ++ +++DPL N G  +V  RG+  A+L+IIGEAPG  E+  G+PFVGRAG+LLDKI + GGFD E  +++TN V R P     K  R P   E++YY+PY++E IRL+ P I++L G VA Q+LLG   IT  RG W+   +  W+MP++HPSYLLRNP R     K  M  DI E+RRKY
Sbjct:   13 QYASLDELFDAMKQMKDDPLANAGTNVVISRGNPQARLLIIGEAPGPEENIKGRPFVGRAGQLLDKILEAGGFDPETDVFITNSVFRLPPGTDGKAFRKPTDEEIKYYRPYVIEIIRLVDPLIMLLTGNVACQSLLGKTGITSLRGQWTQMDSR-WVMPIYHPSYLLRNPSREPGSPKAQMWDDIREVRRKY 203          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A350WUH5_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A350WUH5_9CHLR)

HSP 1 Score: 181 bits (459), Expect = 3.220e-52
Identity = 96/196 (48.98%), Postives = 129/196 (65.82%), Query Frame = 0
Query:  149 QFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRP-----KKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPVSITKARGNWSGGGTEPWMMPVFHPSYLLRNPIR-----KHDMVTDIEEIRRKYMQVV 334
            Q+A+ E+ +  ++ L++DPL N G  IV  RG+  AKL+IIGEAPG  E+  GKPFVGRAG+LLDKI +   F+ E  +Y+TN V R P     K  R P  AE+++Y+PY+ E +RLI P I++L G VA Q++L    IT  RG W+  G E W+MP+FHPSYLLRNP R     K  M  DI E+RRKY +++
Sbjct:   25 QYATLEEALNAIRGLKDDPLANAGTNIVISRGNPEAKLLIIGEAPGPEENIKGKPFVGRAGQLLDKILEAANFNPETDVYITNSVFRLPPGDDGKAFRKPTDAEIEFYRPYVFEIVRLIDPRIILLTGNVACQSVLKKTGITSLRGQWTQSG-ERWIMPIFHPSYLLRNPSREPGSPKAQMWEDIREVRRKYDELI 219          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 179 bits (455), Expect = 8.060e-52
Identity = 94/187 (50.27%), Postives = 123/187 (65.78%), Query Frame = 0
Query:  150 FASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRPKKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPV-SITKARGNWSGGGTEPWMMPVFHPSYLLRNPIR-----KHDMVTDIEEIRRKY 330
            + +H+ L++ L++L +DPL++ G  +V YRG   A LMIIGEAPG  EDK+GKPFVGR+G+LLDKI     F+ E  IY+TN +KRRP  NR P   E++YY P+L EEIRL+ P I++LAG  A   +L     ITK RG W   G   W+MP+FHP+YLLRNP +     K  M  DI  +R KY
Sbjct:   12 YPTHQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAGKYAMLTILQEKRGITKVRGQWVEQGGR-WVMPIFHPAYLLRNPRKTPGSPKALMWEDIRAVRAKY 197          
BLAST of Gchil4316.t1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 179 bits (454), Expect = 9.160e-52
Identity = 94/193 (48.70%), Postives = 127/193 (65.80%), Query Frame = 0
Query:  148 MQFASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKLGKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRPKKNRTPNLAEMQYYKPYLLEEIRLIQPAIVVLAGAVAAQALLGPV-SITKARGNWSGGGTEPWMMPVFHPSYLLRNPIRKHDMVT-----DIEEIRRKYMQVV 334
            +QFASH++L++ L +L  DPL+  GG IV YRG+  AKLMIIGE PG  ED+L KPFVGR+G+LLD+I     F+ E+ +Y++NVV+RRP KNR P   E+ +Y PYL EEIRL+ P I++L G  A   +L     ITK RG W       W+MP+FHP+YLLRNP ++          DI  +R KY +++
Sbjct:    6 LQFASHQELVEALNNLGGDPLEQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYISNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIGRHAMMTILKEKRGITKVRGQWFQKDGR-WIMPMFHPAYLLRNPGKRPGSPKSLTWDDIRAVRAKYDELM 197          
The following BLAST results are available for this feature:
BLAST of Gchil4316.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILN4_9FLOR2.960e-10776.38Type-4 uracil-DNA glycosylase n=1 Tax=Gracilariops... [more]
A0A835YMS9_9STRA2.510e-5751.01Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi... [more]
A0A7S2S1J0_9STRA1.030e-5351.79Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul... [more]
A0A3N5V4D9_9CHLR3.850e-5350.52Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ... [more]
A0A3M1EZS2_9CHLR7.630e-5350.26Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ... [more]
A0A7Y4RID3_9CHLR9.240e-5348.50Uracil-DNA glycosylase n=1 Tax=Anaerolineales bact... [more]
A0A363U8T5_9CHLR2.230e-5248.96Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineal... [more]
A0A350WUH5_9CHLR3.220e-5248.98Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae... [more]
A0A1W9W486_9CHLR8.060e-5250.27Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac... [more]
A0A7C3BN30_9CHLR9.160e-5248.70Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005122Uracil-DNA glycosylase-likeSMARTSM00986UDG_2coord: 177..324
e-value: 1.1E-28
score: 111.3
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 179..316
e-value: 9.4E-36
score: 123.1
NoneNo IPR availableSMARTSM00987UDG_2_acoord: 177..324
e-value: 1.1E-28
score: 111.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..132
NoneNo IPR availablePANTHERPTHR33693TYPE-5 URACIL-DNA GLYCOSYLASEcoord: 145..330
NoneNo IPR availablePANTHERPTHR33693:SF1TYPE-4 URACIL-DNA GLYCOSYLASEcoord: 145..330
NoneNo IPR availableCDDcd10030UDG-F4_TTUDGA_SPO1dp_likecoord: 167..327
e-value: 2.33383E-66
score: 204.6
IPR005273Uracil-DNA glycosylase family 4TIGRFAMTIGR00758TIGR00758coord: 167..328
e-value: 1.9E-42
score: 142.9
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 154..339
e-value: 1.1E-50
score: 173.7
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 153..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:2084596..2085630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4316.t1Gchil4316.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 2084596..2085630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4316.t1 ID=Gchil4316.t1|Name=Gchil4316.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=345bp
MKTLQVAPRATFISAPQIFGLVKPSAERGGAKISVRPNHRSWLMCSDIGE
AAKASVFGPSPFQKYRIARSRSASSRSSRGTKPVIDTSSPEANVVARVEE
EVVNEIGEESKTEDANTETVSDPRTRNSNTNTSVDSKNIKDSKTYDEMQF
ASHEDLMQVLQHLENDPLKNEGGRIVTYRGSKTAKLMIIGEAPGEMEDKL
GKPFVGRAGELLDKIFDYGGFDTEKQIYVTNVVKRRPKKNRTPNLAEMQY
YKPYLLEEIRLIQPAIVVLAGAVAAQALLGPVSITKARGNWSGGGTEPWM
MPVFHPSYLLRNPIRKHDMVTDIEEIRRKYMQVVPHDTLHPLKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005122Uracil-DNA_glycosylase-like
IPR005273Ura-DNA_glyco_family4
IPR036895Uracil-DNA_glycosylase-like_sf