Gchil4300.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4300.t1
Unique NameGchil4300.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length255
Homology
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BLAST of Gchil4300.t1 vs. uniprot
Match: A0A2V3IBQ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBQ3_9FLOR)

HSP 1 Score: 84.3 bits (207), Expect = 1.360e-16
Identity = 46/63 (73.02%), Postives = 58/63 (92.06%), Query Frame = 0 
Query:   82 SEKPLLMSDISQMMETMHSKNLMLKKLVRMQQKRVELLKTENEELRRDGKRKDARLKNAEVTM 144
            ++KP+LM+DIS+MMETMHSKNLMLKKLVRMQQ R+ELLK+EN+ELR+D K   A+L+NAEVT+
Sbjct:   66 NDKPVLMNDISRMMETMHSKNLMLKKLVRMQQARLELLKSENDELRKDVKXXXAQLRNAEVTI 128
The following BLAST results are available for this feature:
BLAST of Gchil4300.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IBQ3_9FLOR1.360e-1673.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 244..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..221
NoneNo IPR availableTMHMMTMhelixcoord: 222..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1982827..1983591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4300.t1Gchil4300.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1982827..1983591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4300.t1 ID=Gchil4300.t1|Name=Gchil4300.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=255bp
MCSLHTSSPHHVESSERELADITAAAGASGPVAGHAAAGVAVDANDVQHA
AGEAVNDAQGEAAAGECEGKGGGKGEGEEIGSEKPLLMSDISQMMETMHS
KNLMLKKLVRMQQKRVELLKTENEELRRDGKRKDARLKNAEVTMEYLRRE
MEEQRGGDTNNKQASSGDSGSLDERATTVRRNSATATGGSGKQRARRTSA
HWVMQRVARRVSAMKGGRAKKGVALCVCTLGGALVLAAMLHSWSRDGGDS
SATK*
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