Gchil4298.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4298.t1
Unique NameGchil4298.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length480
Homology
BLAST of Gchil4298.t1 vs. uniprot
Match: A0A2V3J167_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J167_9FLOR)

HSP 1 Score: 641 bits (1653), Expect = 4.570e-227
Identity = 311/480 (64.79%), Postives = 405/480 (84.38%), Query Frame = 0
Query:    1 MEQALNPKVYQIGYAGKDAVKECFENRDYEIEKVVDFIMEFKNLRGLQFETT--PLRLLKKGGFAPSRTLSDVLRIVIDRMKRDVASLPHDKLDCLLEKSFTYLTVPHLASVPIATLEHLNVVDPNIWKQIVDNGLNDSPYTDLPLSIKKRIWSFEPKALDHEIDALIDSLPEMGTPENVDDFASKLDRHRMRSTSAKLNELLRMLEGMGENEVMQVMEKMVERAAVEQVSAKLDTIGTFFHDLVLRLPTAAVSGPNLMTVRKIAKLLDTHASHEINLDTHLLREIREVMSAERPNGAVTLLLGSTYSRDFLAEQVVYGLITRRGPINDFTDGNILKSAAAHLKADPYIEDLTFLNICNMKTGTLLSGSSSVTDAELEEPFQLFFQLMMDEIHLEITHFQDSYYSANEMLPNTRLVEAVQKGRLQRRVLTSYCLQQYIHGNLVALSRYRLLLEDVLRAADNVTEPREVTLAYQLIIKIIG 478
            MEQ+L+P++YQIGYAG+DA+KE FENRDY++E+V  FI++F+ LR LQF++   PL LLK GGF+ SR L DVL+++ID++KRD+ +L H+KL+ LLEKSFTYLTVP LA +PIA LEH+NVVDP+IWKQIVDNGL+++PY DLPLSIKKRIWSFEPKALDHEI+AL+D LPE    E++++F  K DRH++RS +  L +LLRMLEGMGENEV+QV+EKM+ERA+VEQ ++K  +I  F+HDL+LRLP+  VSGPN++++RK+A+ L +  S+E+++D+HLL+ IRE +  E P+ +V LLLGSTY+RDFLAEQ+V+ LI RRGPIND+ D  IL+SA +HLKADP+IEDLT+LN+CNMK+  ++SGS  V +AE++EPFQLFFQLMMDEIH +I    DSYYSAN  LPN +LV+AVQKG+LQRRV++SYCLQQ+IH N+V+LSRYRL+LEDVLRAAD  TE REV LA+QLI++II 
Sbjct:    1 MEQSLDPELYQIGYAGQDAIKESFENRDYDLERVKQFIIDFRTLRRLQFDSVRAPLELLKMGGFSESRVLRDVLKVMIDKVKRDINTLSHEKLESLLEKSFTYLTVPQLAPIPIAVLEHMNVVDPSIWKQIVDNGLSEAPYIDLPLSIKKRIWSFEPKALDHEIEALLDRLPEAPPSESIEEFVVKQDRHKLRSANQMLGDLLRMLEGMGENEVLQVIEKMIERASVEQTASKHISIANFYHDLLLRLPSVVVSGPNMISLRKMARFLASVPSYELDIDSHLLKSIRESLLRETPSSSVALLLGSTYTRDFLAEQLVFSLIHRRGPINDWNDTTILESATSHLKADPHIEDLTYLNLCNMKSAGIVSGSDRVAEAEVDEPFQLFFQLMMDEIHADIVAHHDSYYSANVGLPNVQLVDAVQKGKLQRRVMSSYCLQQFIHRNMVSLSRYRLILEDVLRAADQTTELREVALAHQLILRIIN 480          
BLAST of Gchil4298.t1 vs. uniprot
Match: R7QN54_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN54_CHOCR)

HSP 1 Score: 358 bits (920), Expect = 5.410e-116
Identity = 198/477 (41.51%), Postives = 288/477 (60.38%), Query Frame = 0
Query:    1 MEQALNPKVYQIGYAGKDAVKECFENRDYEIEKVVDFIMEFKNLRGLQFETTP--LRLLKKGGFAPSRTLSDVLRIVIDRMKRDVASLPHDKLDCLLEKSFTYLTVPHLASVPIATLEHLNVVDPNIWKQIVDNGLNDSPYTDLPLSIKKRIWSFEPKALDHEIDALIDSLPEMGTPENVDDFASKLDRHRMRSTSAKLNELLRMLEGMGENE--VMQVMEKMVERAAVEQVSAKLDTIGTFFHDLVLRLPTAAVSGPNLMTVRKIAKLLDTHASHEINLDTHLLREIREVMSAERPNGAVTLLLGSTYSRDFLAEQVVYGLITRRGPINDFTDGNILKSAAAHLKADPYIEDLTFLNICNMKTGTLLSGSSSVTDAELEEPFQLFFQLMMDEIHLEITHFQDSYYSANEMLPNTRLVEAVQKGRLQRRVLTSYCLQQYIHGNLVALSRYRLLLEDVLRAADNVTEPREVTLAYQLI 473
            M   L+P    IGYAGKD +K  FE    +   V  F+ +F+ +  L   T    L LLK GG + +R  ++V   ++D MKR +A+L  + L  LL+KS+++LTVP L+ + I+ LE L+ VD  IW QIV NGL++SPYTDLP SIKKRIW  E  A DHEID ++D + E+ TP  ++ F    DR + RS    L +L+R+   +   E  V ++++K V++A   Q  +K   I   +HD +  +       P+L ++RK+AK LDT  + E ++D+ +L  IR+ +  E     V LL+ S+YSRDFLA Q+V  L+ RRG + +  D  IL  AA HL+ADP+I DLTFL +CNMK   L+S   + T+ E   PFQ+FF L++ E+ L+   F D +Y+ N  LP+ + ++ VQ G+L+RRV+TSYCLQ + HGN V LSR+RL+L+      D   E RE  +A  L+
Sbjct:    1 MNHCLDPGQKLIGYAGKDELKAAFEEVLPDKVGVKKFVKDFREVHSLNGRTISPVLPLLKLGGISSNRMANEVKNALVDIMKRQIATLEQEALQALLDKSYSFLTVPELSPIGISVLERLHYVDRRIWAQIVQNGLDESPYTDLPTSIKKRIWPHEVSAFDHEIDKVLDCITELTTPPGIEAFFVTPDRKKARSEDPILTDLMRLSNAVASEEGMVARIVDKFVQKATAAQTGSKRIAIANVYHDFLTTVNPRV--NPSLTSLRKMAKFLDT-PNGEDDIDSDVLGFIRKNIGVEASCATVGLLVASSYSRDFLAFQLVLRLLNRRGSLGEGRDQTILDCAAEHLRADPWIPDLTFLTLCNMKAAALISEHKAPTETEANMPFQMFFPLLIHEMELDDQRFSDQFYAMNAALPDPKFLQIVQAGKLERRVVTSYCLQLFGHGNFVGLSRFRLILDVAFHQMDREEEVRETMIAVNLL 474          
The following BLAST results are available for this feature:
BLAST of Gchil4298.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J167_9FLOR4.570e-22764.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QN54_CHOCR5.410e-11641.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1961260..1962699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4298.t1Gchil4298.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1961260..1962699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4298.t1 ID=Gchil4298.t1|Name=Gchil4298.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=480bp
MEQALNPKVYQIGYAGKDAVKECFENRDYEIEKVVDFIMEFKNLRGLQFE
TTPLRLLKKGGFAPSRTLSDVLRIVIDRMKRDVASLPHDKLDCLLEKSFT
YLTVPHLASVPIATLEHLNVVDPNIWKQIVDNGLNDSPYTDLPLSIKKRI
WSFEPKALDHEIDALIDSLPEMGTPENVDDFASKLDRHRMRSTSAKLNEL
LRMLEGMGENEVMQVMEKMVERAAVEQVSAKLDTIGTFFHDLVLRLPTAA
VSGPNLMTVRKIAKLLDTHASHEINLDTHLLREIREVMSAERPNGAVTLL
LGSTYSRDFLAEQVVYGLITRRGPINDFTDGNILKSAAAHLKADPYIEDL
TFLNICNMKTGTLLSGSSSVTDAELEEPFQLFFQLMMDEIHLEITHFQDS
YYSANEMLPNTRLVEAVQKGRLQRRVLTSYCLQQYIHGNLVALSRYRLLL
EDVLRAADNVTEPREVTLAYQLIIKIIGP*
back to top