Gchil4268.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4268.t1
Unique NameGchil4268.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length537
Homology
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BLAST of Gchil4268.t1 vs. uniprot
Match: A0A2V3J104_9FLOR (Protein sel-1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J104_9FLOR)

HSP 1 Score: 355 bits (910), Expect = 7.280e-113
Identity = 332/487 (68.17%), Postives = 388/487 (79.67%), Query Frame = 0 
Query:   44 FDARNSLTEEAERLLKEDTMTIS--EXXXXXXXXXXXXXXXXXPRAKTLLGSLFREGIIVEKNRDEALRLFNEAAEQGDPTAQCSLGAFKLQVVKEKMVEGMHDTVKHTDFTVDINERGEARGMLHVESKGGGPVDAATPAELVRRVRKARRKAGFTDEQAREFEEFKIRKEEEAMAAERQDAISWLERAVQQDNVEAFVILGNEILQEDPKRAIDLYEAAVQRGRNVDAYYNLGQIYTRGLGSVAPNAKAALKNFAMAAQLGDSSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGRLGEAEAYCSAAAMHFHGFGTDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNKNVAEHFFRVADERESASRKSDEVHLQKPVASTEAPKHPMADVPRPNKESRDSELV 528
            F  +NS  +EAERLL E   + S                    PRAKTLLGS+FREG+IVE++R +A RLF EAA +GDP AQCSLGA +L V+K++    + D V HT+F VD++++GE RG L +E +G    DA  PAELVRRVRKARRKAGFTD+++RE+EEF  R+ E  +  +R+ A+SWLE+A +  N EA VILGNE+L +DP RAI+LYE+A++ G N DAYYNLGQIYT+G GSV P+ K ALKNFAMAAQLGD SAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFL AGRLGEAEA CSAAAMHFHGFGT E+           XXXXXXXXXXXXXXXXXXXXXXX+NK ++E+FFRVA+ER+S ++K DE+HLQ PV  T+APKHPMAD+PRP+KE+ +S +V
Sbjct:   55 FHDQNSSAQEAERLLTEPNASDSFEGRAGRALELLQVAVSQDSPRAKTLLGSMFREGLIVEQDRAKAERLFEEAAAEGDPVAQCSLGALQLDVLKQEKAAEIRDKVTHTEFAVDVDDKGEIRGRLQMEVEGLPMTDAPKPAELVRRVRKARRKAGFTDQESREYEEFVRREREGQLVEKRRIAMSWLEKAAEHGNDEAMVILGNEVLDDDPDRAIELYESAIRSGHNTDAYYNLGQIYTKGHGSVQPDPKIALKNFAMAAQLGDPSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLEAGRLGEAEALCSAAAMHFHGFGTPEEQHEAFLLYQRAXXXXXXXXXXXXXXXXXXXXXXXANKKLSEYFFRVAEERDSDNQKRDEIHLQTPVEKTDAPKHPMADIPRPDKEAEESTIV 541
The following BLAST results are available for this feature:
BLAST of Gchil4268.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J104_9FLOR7.280e-11368.17Protein sel-1-like n=1 Tax=Gracilariopsis chorda T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 269..305
e-value: 2.3E-6
score: 37.2
coord: 85..120
e-value: 9.8E-6
score: 35.1
coord: 306..342
e-value: 9.1E-4
score: 28.5
coord: 343..379
e-value: 9.5
score: 13.9
coord: 453..488
e-value: 47.0
score: 7.8
coord: 417..452
e-value: 1.3E-5
score: 34.6
coord: 380..416
e-value: 0.031
score: 23.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 386..415
e-value: 0.041
score: 14.6
coord: 459..481
e-value: 1.2
score: 9.9
coord: 306..342
e-value: 0.0021
score: 18.7
coord: 270..305
e-value: 5.8E-5
score: 23.7
coord: 417..449
e-value: 0.0017
score: 19.0
coord: 249..266
e-value: 160.0
score: 3.2
coord: 89..120
e-value: 0.0023
score: 18.6
coord: 224..236
e-value: 96.0
score: 3.9
coord: 344..358
e-value: 89.0
score: 4.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 366..502
e-value: 8.3E-28
score: 99.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 31..143
e-value: 1.2E-12
score: 49.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 210..365
e-value: 1.7E-29
score: 104.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..536
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 370..483
coord: 66..130
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 66..130
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 244..394
coord: 370..483
coord: 218..359
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 244..394
coord: 218..359
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 222..350
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 368..485
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 67..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1756561..1758171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4268.t1Gchil4268.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1756561..1758171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4268.t1 ID=Gchil4268.t1|Name=Gchil4268.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=537bp
MAQRLPLLRWSRALSQTKCVTLYRNFLCSYSTKSSESCENTNIFDARNSL
TEEAERLLKEDTMTISENAQRVLEILKTAVSQNSPRAKTLLGSLFREGII
VEKNRDEALRLFNEAAEQGDPTAQCSLGAFKLQVVKEKMVEGMHDTVKHT
DFTVDINERGEARGMLHVESKGGGPVDAATPAELVRRVRKARRKAGFTDE
QAREFEEFKIRKEEEAMAAERQDAISWLERAVQQDNVEAFVILGNEILQE
DPKRAIDLYEAAVQRGRNVDAYYNLGQIYTRGLGSVAPNAKAALKNFAMA
AQLGDSSAQFYLGHLYKVGSEEIKLDLASARQYIEMAAAQDHPGALYNLA
LMHKDGEGGLEISHGAFLRYVNQAANLDHGPAHVCLAELYYTGSNGIDVD
YKKALYHFLAAGRLGEAEAYCSAAAMHFHGFGTDEDQHQAFLLYQKAAEF
GSTKAFRNIGSMYFHGHGIPSNKNVAEHFFRVADERESASRKSDEVHLQK
PVASTEAPKHPMADVPRPNKESRDSELVTPDPSVPI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf