Gchil4263.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4263.t1
Unique NameGchil4263.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length116
Homology
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A2V3J0Z5_9FLOR (Tubulin-specific chaperone A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Z5_9FLOR)

HSP 1 Score: 151 bits (381), Expect = 3.160e-45
Identity = 81/114 (71.05%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    1 MASESHPSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSNDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLNDPDIKTRLDGTKELESATAAVSTASQKLQ 114
            MAS S   LRTLKIKTAVV+RI+KELDSYY ELE N+K VE+IR S+DHSKLKQMENVLGETQCMIPDT TRL+NA+DDLSALL+       L GT EL+ ATAA+S AS+K++
Sbjct:    1 MASISEAPLRTLKIKTAVVERISKELDSYYAELEDNKKTVEEIRRSDDHSKLKQMENVLGETQCMIPDTMTRLTNAIDDLSALLDSNSTNELLAGTPELDRATAAISNASKKVE 114          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A8B8FMK9_9HEMI (Tubulin-specific chaperone A n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8FMK9_9HEMI)

HSP 1 Score: 73.6 bits (179), Expect = 1.260e-14
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLND 86
            P ++TLKIKT VV+R+TKE   Y +E E  R+KVE+++ S  D S LK+ E VL E+Q MIPDT  RL  A  DL +++ D
Sbjct:    4 PRIKTLKIKTGVVKRLTKEKLMYIKETEQQREKVEKLKASGIDESNLKKQEEVLRESQMMIPDTQRRLKAAFQDLKSVIAD 84          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A5E4MGM5_9HEMI (Tubulin-specific chaperone A n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4MGM5_9HEMI)

HSP 1 Score: 67.8 bits (164), Expect = 2.170e-12
Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCS-NDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLND 86
            P ++TLKIKT VV+R+TKE   Y +E +   +KV++++ S +D S +K+ E VL E+Q MIPDT  RL  A DDL +++ D
Sbjct:    4 PRIKTLKIKTGVVKRLTKEKLMYIKETDQQLEKVKKLKESGSDESVIKKQEEVLRESQMMIPDTQRRLKAAFDDLKSVIAD 84          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A6G0YRY6_APHCR (Tubulin-specific chaperone A n=6 Tax=Aphidinae TaxID=133076 RepID=A0A6G0YRY6_APHCR)

HSP 1 Score: 65.9 bits (159), Expect = 1.260e-11
Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLND 86
            P ++TLKIKT VV+R+TKE   Y +E E   +KV++++ +  D S  K+ E VL E+Q MIPDT  RL  A +DL +++ D
Sbjct:    4 PRIKTLKIKTGVVKRLTKEKLMYIQETEQQLEKVQKLKEAGIDESTFKKQEEVLRESQMMIPDTQRRLKAAFEDLKSVVAD 84          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A8D8VDI2_9HEMI (Tubulin-specific chaperone A n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8VDI2_9HEMI)

HSP 1 Score: 60.8 bits (146), Expect = 1.380e-9
Identity = 35/109 (32.11%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCS-NDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLNDPDIKTRLDGTKELESATAAVSTASQKLQ 114
            P ++TLKIKT V++RITKE  +Y +E+     + E+++   +D   LK+ + V+ E+Q M+P+   R+  A +DL ++L     +  L GT++ + A   V+ A+++++
Sbjct:    4 PRIKTLKIKTGVLKRITKEKTTYIKEVGIEEARYEKLKAGGSDEHVLKKQQEVIQESQMMVPECHRRIVRAYEDLKSILES---EQDLAGTEDYKLAAQIVAEAAKEIE 109          
BLAST of Gchil4263.t1 vs. uniprot
Match: U5H2S2_USTV1 (Tubulin-specific chaperone A n=4 Tax=Microbotryum TaxID=34416 RepID=U5H2S2_USTV1)

HSP 1 Score: 60.5 bits (145), Expect = 1.900e-9
Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 0
Query:    2 ASESHPSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLNDPDIKTRLDGTKELESATAAVSTA 109
            A ++  + R L IKT VV R+ KEL SY  E      +VE++  +N D ++++Q + V  E+  MIPD+  RL+ AV +L  L+   + +T   G +ELE A  AV+ +
Sbjct:    4 APKNTSTTRQLVIKTGVVNRVVKELQSYKSEAVTMASRVEKMEQNNEDEAEIRQQKRVHAESLAMIPDSEQRLAKAVAELEDLIEASEEET--SGAEELEKAKQAVAAS 110          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A0B7AZ25_9EUPU (Tubulin-specific chaperone A n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7AZ25_9EUPU)

HSP 1 Score: 59.3 bits (142), Expect = 4.440e-9
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL 84
            P  +TLKIKT VV+R+TKE  SY  E+    +++E+++    D   +K+   VL E++CM+PDT  RL  A  +L+ LL
Sbjct:    4 PRYKTLKIKTGVVRRLTKEKASYEVEVVQLEERLEKMKADGKDEHDIKKQYEVLQESRCMVPDTLKRLKKAAAELNDLL 82          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A0K3CQY8_RHOTO (Tubulin-specific chaperone A n=4 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CQY8_RHOTO)

HSP 1 Score: 58.2 bits (139), Expect = 1.190e-8
Identity = 43/110 (39.09%), Postives = 59/110 (53.64%), Query Frame = 0
Query:    1 MASESHPSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLNDPDIKTRLDGTKELESATAAVSTA 109
            MAS++    R L IKT VV R  KEL SY EE    +K+ + +  +  D  +++Q   V  E+Q MIPDT  RL+ AV DL  L+     +  L  T E + A AA+  A
Sbjct:    1 MASQT----RQLAIKTGVVNRTVKELQSYREEAVELKKRADAMEAAGEDEYEVRQQRKVQAESQQMIPDTEKRLAKAVADLEELM--ASTEDELAETDEFKKAEAALKLA 104          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A139AM46_GONPJ (Tubulin-specific chaperone A n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AM46_GONPJ)

HSP 1 Score: 53.5 bits (127), Expect = 4.370e-7
Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   10 RTLKIKTAVVQRITKELDSYYEELEGNRKKVEQ-IRCSNDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLN 85
            R +KIKT V++R+ KELDSY++E E  R ++++ ++   D   +++   VL ET  MIPD   RL  A  +L  L++
Sbjct:    4 RDIKIKTGVLKRLNKELDSYHKEHEQQRGRIDKMVQEGKDEHDIRKQREVLEETTNMIPDCKKRLVAAYKELEKLVD 80          
BLAST of Gchil4263.t1 vs. uniprot
Match: A0A1D2NE92_ORCCI (Tubulin-specific chaperone A n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NE92_ORCCI)

HSP 1 Score: 54.3 bits (129), Expect = 4.980e-7
Identity = 35/106 (33.02%), Postives = 57/106 (53.77%), Query Frame = 0
Query:    9 LRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLNDPDIKTRLDGTKELESATAAVSTASQKL 113
            L+TLKIKT VV+R TKE  SY +E    R K+E+ +    D   ++Q +  L E++ M+P+   +L    ++L A++ +   K  L  T E ++A   +  A   L
Sbjct:   13 LKTLKIKTGVVKRYTKEKQSYEKEASQQRAKIEKFKQEGKDEHFMRQQDGCLKESEMMVPEVQRQLLKGYEELKAIVEEQ--KGELGQTGEYKTAVQILDDAKAHL 116          
The following BLAST results are available for this feature:
BLAST of Gchil4263.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3J0Z5_9FLOR3.160e-4571.05Tubulin-specific chaperone A n=1 Tax=Gracilariopsi... [more]
A0A8B8FMK9_9HEMI1.260e-1450.62Tubulin-specific chaperone A n=1 Tax=Sipha flava T... [more]
A0A5E4MGM5_9HEMI2.170e-1246.91Tubulin-specific chaperone A n=1 Tax=Cinara cedri ... [more]
A0A6G0YRY6_APHCR1.260e-1145.68Tubulin-specific chaperone A n=6 Tax=Aphidinae Tax... [more]
A0A8D8VDI2_9HEMI1.380e-932.11Tubulin-specific chaperone A n=1 Tax=Cacopsylla me... [more]
U5H2S2_USTV11.900e-936.70Tubulin-specific chaperone A n=4 Tax=Microbotryum ... [more]
A0A0B7AZ25_9EUPU4.440e-941.77Tubulin-specific chaperone A n=1 Tax=Arion vulgari... [more]
A0A0K3CQY8_RHOTO1.190e-839.09Tubulin-specific chaperone A n=4 Tax=Rhodosporidiu... [more]
A0A139AM46_GONPJ4.370e-738.96Tubulin-specific chaperone A n=1 Tax=Gonapodya pro... [more]
A0A1D2NE92_ORCCI4.980e-733.02Tubulin-specific chaperone A n=1 Tax=Orchesella ci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
NoneNo IPR availableGENE3D1.20.58.90coord: 5..113
e-value: 1.9E-26
score: 94.3
NoneNo IPR availablePANTHERPTHR21500:SF0TUBULIN-SPECIFIC CHAPERONE Acoord: 6..109
IPR004226Tubulin binding cofactor APFAMPF02970TBCAcoord: 8..105
e-value: 4.2E-23
score: 81.5
IPR004226Tubulin binding cofactor APANTHERPTHR21500TUBULIN-SPECIFIC CHAPERONE Acoord: 6..109
IPR036126Tubulin binding cofactor A superfamilySUPERFAMILY46988Tubulin chaperone cofactor Acoord: 7..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1690548..1691153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4263.t1Gchil4263.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1690548..1691153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4263.t1 ID=Gchil4263.t1|Name=Gchil4263.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=116bp
MASESHPSLRTLKIKTAVVQRITKELDSYYEELEGNRKKVEQIRCSNDHS
KLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLNDPDIKTRLDGTKELE
SATAAVSTASQKLQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004226TBCA
IPR036126TBCA_sf