Gchil4258.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4258.t1
Unique NameGchil4258.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length559
Homology
BLAST of Gchil4258.t1 vs. uniprot
Match: A0A2V3J0Z4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Z4_9FLOR)

HSP 1 Score: 615 bits (1586), Expect = 1.920e-214
Identity = 352/553 (63.65%), Postives = 418/553 (75.59%), Query Frame = 0
Query:    1 MLSEARYSKRVRSSHVAFITPFVLTPSCRSLFHGQTPSVRLHSRLTPYVLHRKIK-RPLNLVCLAENTRFESNPHSPISHTSTIETVLKNVFIATTAGLTVLMPRQAIAKQSVITITDQVPNFTLPSQEEALRRDPSHQSILVKSLKGAKKVAPVVLVTVASVWALNAVYKRAQQQRLRDFQEQLRSSSYEAFGTDTLSQGNSDSESARKSSSPPQKQNRFKFRKREGRVSEGHDMSSKVKLDIFQSKGAEEAPKVVNQVYEGIQDAVPTSALERAIDIFITGDFSSDTNARKSALAKVLEARQASGLSEGAFRAVAEAYLSRTISAKLDRAVSSLSFDESESLGNLRTAVKVIDDAEDIDKSLKLNYNGINRGNEAEKEDLYRRYAVHCFTDQEKLGVEIARLQKLQNLLKIDQRRSEALLADVSKVMFQVAVSAAMMDGEGKDANMDSVKDLYESFGKLMDEGSADSITSEVAVMRIMYALQMLLQQEGSLKDVEGFGKMCEELGVDIDELISRAGVLEKTMGADATRFVDELREIVKAAGEEPKDGDLGQ 552
            MLS+AR SKR R SH AF+ P  L  SC S F GQ  S RL  R+    +H+  + R   + CL+++    S   SP S  +    +LKN   AT AGL V +PR AIAKQSVITITDQVPNFTLPSQ E+LRR+   QSI+VK+L GAKKVAPVVLV V S WAL  +Y R QQQRL+DFQ+QLRSSSYE   T   S+ +   + A  S+  PQ Q R+KFR  +GR S+  ++SSKVKLDIFQ++ A     V N  YEGI DA PTS  ERAID FIT DF+S  + RKSALA +   R +SGLS  A R+VAEAY+SR +SAK+DRAV SLSFDE ES+ NL  AV+++D AE+IDK+ KLNY GI+RG E+EKE+LYRRYAVHCFT++ KL VEI RLQKLQ+LLKID+ RSEA+LADVSKVMFQVAVS AM+DGE K+ANMDSVK+LYESFG L+D+ SADSITSEVAVMRIMYALQMLLQQEGSLKD+E FG+MC+ELGVDIDELISR GVLEKTMGADAT+FVDELR+IVKAAG+   + D  +
Sbjct:    1 MLSDARRSKRERPSHYAFLAPCSLATSCHSSFLGQRRS-RLCRRIASSHVHQHAQNRRATIRCLSKHNANRSPQPSPPSPFNVFR-ILKNALFATAAGLAVFVPRNAIAKQSVITITDQVPNFTLPSQAESLRRESGGQSIVVKTLNGAKKVAPVVLVGVGSAWALKNMYTRVQQQRLKDFQDQLRSSSYEGLNTSLFSKDSDVDQGATTSAYSPQSQARYKFRNVDGRNSD-RNLSSKVKLDIFQTREASMKSNVSNASYEGIVDASPTSPFERAIDEFITKDFTSMPDDRKSALADIANLRDSSGLSGTAARSVAEAYVSRAVSAKIDRAVVSLSFDEVESVRNLIAAVEIMDAAEEIDKAAKLNYIGIHRGKESEKEELYRRYAVHCFTNESKLDVEIMRLQKLQDLLKIDRARSEAILADVSKVMFQVAVSQAMVDGEDKNANMDSVKELYESFGSLVDQDSADSITSEVAVMRIMYALQMLLQQEGSLKDIEKFGQMCQELGVDIDELISRVGVLEKTMGADATQFVDELRDIVKAAGDNQNEVDSAE 550          
BLAST of Gchil4258.t1 vs. uniprot
Match: R7QEW5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEW5_CHOCR)

HSP 1 Score: 260 bits (664), Expect = 3.490e-76
Identity = 176/462 (38.10%), Postives = 260/462 (56.28%), Query Frame = 0
Query:   96 AGLTVLMPRQAIAKQSVITITDQVPNFTLPSQEEALRRDPSHQSILVKSLKGAKKVAPVVLVTVASVWALNAVYKRAQQQRLRDFQEQLRS--SSYEAFGTDTLSQGNSDS--ESARKSSSPPQKQN-RFKFRKREGRVSEGHDMSSKVKLDIFQSKGAE-------------EAPKVVNQVYEGIQDAVPTSALERAIDIFITGDFSSDTNARKSALAKVLEARQASGLSEGAFRAVAEAYLSRTISAKLDRAVSSLSFDESESLGNLRTAVKVIDDAEDIDKSLKLNYNGINRGNEAEKEDLYRRYAVHCFTDQEKLGVEIARLQKLQNLLKIDQRRSEALLADVSKVMFQVAVSAAMMDGEGKDANMDSVKDLYESFGKLMDEGSADSITSEVAVMRIMYALQMLLQQEG-SLKDVEGFGKMCEELGVDIDELISRAGVLEKTMGADATRFVDELREIV 538
            A + + +P  A  K S IT+TDQVPNFTLPSQE A  R  S   +L++ +  AK+  P V V   +VW + +V +RAQ++ LRDFQ QL S  S  +     T + G  DS  +SA  +    +  + R+KFR  +    +  D+ SKV+LD+F++ G+              EAP         +Q   P S +E  I   +    + D  A+++A + +  AR  +GLSE     + + Y+S  +SA++DRA  +L  D+ ESL  L      +  A+ +     L Y G + G E  +E+LYRRYAV C + +E++  ++  L  +Q LL +   R+E +  +++K MFQVAVSAAM DG     + D+++ L +SFG  +D GSADSI SEVAVMR MY+LQ LLQ++G S  DV    KMC+ELGVDIDE++  A  L   +G +A  FV+ LR ++
Sbjct:   57 AAVALPLPSLAARKHSNITMTDQVPNFTLPSQEAATDRGRSANPLLLRVVFVAKRAVPAVAVIALAVWGVRSVLRRAQERELRDFQTQLSSFSSQLDLDANSTAAGGEKDSLLDSANTAKQILETSSKRYKFRA-DSTQEKDDDIESKVRLDLFRAGGSANPKDAANTQMPPAEAPDAAKAEISQVQ---PASPMESTIAECLKQVEAGDDAAKEAAKSSLNAARATAGLSESEGAKLFDTYVSSVVSAQIDRAAINLDSDDRESLRYLHQLAVTMGAAKALGPDAALRYVGEHAGEEKTREELYRRYAVFCLSSEERVKDDLQSLVDMQTLLAVTDARAETINTEIAKGMFQVAVSAAMADGSLDPGSRDALEKLKQSFGDFLDGGSADSIMSEVAVMRAMYSLQQLLQEQGVSDDDVLELRKMCKELGVDIDEMLQNADTLGDALGPEAKEFVESLRGLL 514          
BLAST of Gchil4258.t1 vs. uniprot
Match: A0A1X6PHM8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PHM8_PORUM)

HSP 1 Score: 124 bits (311), Expect = 3.660e-28
Identity = 91/291 (31.27%), Postives = 150/291 (51.55%), Query Frame = 0
Query:  285 SSDTNARKSALAKVLEARQASGLSEGAFRAVAEAYLSRTISAKLDRAVSSLSFDESES---LGNLRTAVKVIDDAEDIDK--------------------SLKLNYNGINRGNEAEKEDLYRRYAVHCFTDQEKLGVEIARLQKLQNLLKIDQRRSEALLADVSKVMFQVAVSAAMMDGEGKDANMDSVKDLYESFGKLMD------------EGSADSITSEVAVMRIMYALQMLLQ-QEGSLKDVEGFGKMCEELGVDIDELISRAGVLEKTMGADATRFVDELREIVK 539
            SSD++A  S L   + A   +G    A R   +AY S  +SA +D A   +  D   +   +  L  A   I  A  + +                     LKL Y G  +G  A++E+LYRRYAV C + ++++  ++  L  +Q LL +   R+EA+  D++K MF VAV+AAM DG+  + N   ++ L +SFG L+D               ADS T+    ++ M ALQ LL+ Q+ + +DV    ++C+++GVDID++++ A  +   + A+A +FV+ LR ++K
Sbjct:   11 SSDSSAVASGLRSAIVA---TGTEVSASRTAFDAYASALVSATIDSAAGDVGNDAKGATALMDRLAAASAAITRASVLSRVLYGDGGAAAAAGGKDAPPVPLKLTYVGAYKGAAAQQEELYRRYAVWCLSSEQRVSSDVQSLVDMQTLLGVSDARAEAINTDIAKGMFDVAVNAAMADGDLDEENRKQLQVLKDSFGDLLDGDPAAVAGGAPGAAPADSATA----LKTMGALQELLKHQQVTSEDVAELRRLCKQMGVDIDDMLASADAMGSQLPAEAKQFVESLRGLLK 294          
The following BLAST results are available for this feature:
BLAST of Gchil4258.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J0Z4_9FLOR1.920e-21463.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEW5_CHOCR3.490e-7638.10Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PHM8_PORUM3.660e-2831.27Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 403..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..558
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1679513..1681189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4258.t1Gchil4258.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1679513..1681189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4258.t1 ID=Gchil4258.t1|Name=Gchil4258.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=559bp
MLSEARYSKRVRSSHVAFITPFVLTPSCRSLFHGQTPSVRLHSRLTPYVL
HRKIKRPLNLVCLAENTRFESNPHSPISHTSTIETVLKNVFIATTAGLTV
LMPRQAIAKQSVITITDQVPNFTLPSQEEALRRDPSHQSILVKSLKGAKK
VAPVVLVTVASVWALNAVYKRAQQQRLRDFQEQLRSSSYEAFGTDTLSQG
NSDSESARKSSSPPQKQNRFKFRKREGRVSEGHDMSSKVKLDIFQSKGAE
EAPKVVNQVYEGIQDAVPTSALERAIDIFITGDFSSDTNARKSALAKVLE
ARQASGLSEGAFRAVAEAYLSRTISAKLDRAVSSLSFDESESLGNLRTAV
KVIDDAEDIDKSLKLNYNGINRGNEAEKEDLYRRYAVHCFTDQEKLGVEI
ARLQKLQNLLKIDQRRSEALLADVSKVMFQVAVSAAMMDGEGKDANMDSV
KDLYESFGKLMDEGSADSITSEVAVMRIMYALQMLLQQEGSLKDVEGFGK
MCEELGVDIDELISRAGVLEKTMGADATRFVDELREIVKAAGEEPKDGDL
GQNAAVPQ*
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