Gchil4122.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4122.t1
Unique NameGchil4122.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length674
Homology
BLAST of Gchil4122.t1 vs. uniprot
Match: A0A2V3IH80_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH80_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 5.780e-48
Identity = 126/339 (37.17%), Postives = 189/339 (55.75%), Query Frame = 0
Query:  344 PPPPGMSLRVPAQSASFSITQQHKPQLIGERPNVTQCPPISDLRMSLAMDSSIFDQRMRHE--RSVEHAVNPLQPNSGFSATEGSPAAKRRCLNPDVTVPSSAALEGKLSENVMHINPNDVNSYGPFHNSLRVWENNAQSSLRLPGQTDKHENTRHNVSPSAISTLFPRDESTPTVS-PQSCV----MDYGRVQGMEETNSIRQAVSDQRHNCSQQETRVQADCSEANEHAYRTQPPATCGFTNQSKTPPLALGSPNPTLQDLFVAGSAPAGTYYG-DSRDIAPQDSVPVNHN-VPQEATPQRGPLAEESREPAPPPLVNNSEERSADRVGFRVMTARA 673
            PPP   S+ VP  S  F++ Q  K +L+GE+ + +Q   I  LR +L +D+ +FD+R+  +  R V+   + L  N+ F  T  SP AKRRCL+P +   ++  L GK   +++ IN N + S+   + S R WE+  Q +LR+    DK+  ++ +VSPSAISTLF  DE++   S  QS +    M++GRV+G+    S R  +  Q+      + RV+ + S+ NE  YR Q  AT  F +QSK P L L +    L DLFV+ +     YYG ++R   PQD  PV  N V ++   QR     ++R  A   L+N SE ++ DR+G R+MTARA
Sbjct:   43 PPPNPASMGVPTNSNPFAMVQGSKGELVGEQQSSSQSIRIPGLRPNLDVDNRVFDERLNTQPGRGVQQQPSALPTNATFQ-THMSPVAKRRCLSPPLPCRATN-LRGKTPTDILQINTNHLQSFAHDNMSFRGWESTGQPALRMSSPPDKY-GSKADVSPSAISTLFATDEASREGSFRQSAIQRNLMNFGRVEGVPNAASGRSTMMRQQTKFGDLQRRVEGEASDVNELMYRVQ--ATPTFGSQSKMPALPLETSTSGLPDLFVSTNGQVDAYYGGETRQFIPQDPGPVTGNAVAEQIHAQRNASHSDARASATAQLLNTSETKNVDRLGIRIMTARA 376          
BLAST of Gchil4122.t1 vs. uniprot
Match: A0A7R9L5U3_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9L5U3_9ACAR)

HSP 1 Score: 62.8 bits (151), Expect = 2.070e-6
Identity = 42/152 (27.63%), Postives = 67/152 (44.08%), Query Frame = 0
Query:  102 CDAPNCQSVFSQHVRLQRHKAKCHTRTFTCVADNCTAPAFQTYSDLTRHVRIVHEPRPVYQCKLCARQVRSAPA-------LARHVAACETGSLVREHRCGYPHCGAVYSSSGNLGTHIRSKHTNPGGFFCDSCDRRFSLKSSMERHKRTVH 246
            CD P+C+ V      L+ H+ + HT+T + V   C +  F T     +H    H+ R     K   R+ +  PA       L+   A  +  ++     C YP+CG  YS+   L THI  +H   G + C  CD  F  + ++ +H+   H
Sbjct:  656 CDWPDCEVVCQTSRSLEMHRYRAHTKTKSLVCGECGS-CFGT-----KHCLNNHKKRCTSLLKY--RRYKGGPAADDTDDELSPSAAKRQRTAIDEIFWCQYPNCGREYSTQSELKTHIGEQHNTGGQYKCQKCDMSFDGRYNLRKHEIQTH 799          
BLAST of Gchil4122.t1 vs. uniprot
Match: A0A553P7B8_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P7B8_TIGCA)

HSP 1 Score: 60.5 bits (145), Expect = 8.250e-6
Identity = 49/157 (31.21%), Postives = 70/157 (44.59%), Query Frame = 0
Query:  120 HKAKCHTRTFTCVADNCTAPAFQTYSDLTRHVRIVHEPRPVYQCKLCARQVRSAPALARHVAACETGSLVREHRCGYPHCGAVYSSSGNLGTHIRSKHTNPGGFFCDSCDRRFSLKSSMERHKRTVHPPSSNHSC-FVCHTTLLSADHLRTHLAERH 275
            H+ K H +TF C  D C   +     +L +H   V +  P+ +CK C  +      L  H       + V   R     CG V+S++  L THI   H  P  F CD C + F LK++M RHK +VH  +    C + C        +LRTH  + H
Sbjct:  458 HRTKQH-QTFIC--DVCATVS----KNLAKHKNHVKKHVPI-KCKDCPEEFIGKANLLEH------RTKVHGDRFPCKWCGKVFSATWKLKTHITGAHATPR-FMCDLCGQEFRLKTTMYRHKISVHIKNRPFVCRYGCGADYNDECNLRTHEKKTH 599          
The following BLAST results are available for this feature:
BLAST of Gchil4122.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IH80_9FLOR5.780e-4837.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7R9L5U3_9ACAR2.070e-627.63Hypothetical protein (Fragment) n=1 Tax=Medioppia ... [more]
A0A553P7B8_TIGCA8.250e-631.21Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 223..246
e-value: 0.033
score: 23.3
coord: 10..34
e-value: 0.65
score: 19.0
coord: 100..125
e-value: 0.48
score: 19.5
coord: 252..275
e-value: 5.0
score: 16.0
coord: 192..217
e-value: 0.2
score: 20.7
coord: 129..155
e-value: 12.0
score: 12.5
coord: 70..92
e-value: 0.074
score: 22.2
coord: 40..64
e-value: 0.0066
score: 25.7
coord: 161..181
e-value: 40.0
score: 8.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..64
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 102..125
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 225..246
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 12..34
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 72..94
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 254..275
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 223..251
score: 11.281384
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 10..39
score: 13.879271
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 70..97
score: 11.509996
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 100..130
score: 9.327772
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 40..69
score: 12.445236
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 192..222
score: 9.286205
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 39..63
e-value: 3.4E-8
score: 35.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 1..38
e-value: 2.5E-13
score: 51.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 64..127
e-value: 1.8E-7
score: 33.1
coord: 128..187
e-value: 8.4E-7
score: 30.9
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 189..275
e-value: 2.1E-10
score: 42.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..673
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..518
NoneNo IPR availablePANTHERPTHR24388:SF50GROWTH FACTOR-INDEPENDENT 1A TRANSCRIPTION REPRESSOR B-RELATEDcoord: 46..180
coord: 105..271
NoneNo IPR availablePANTHERPTHR24388ZINC FINGER PROTEINcoord: 105..271
NoneNo IPR availablePANTHERPTHR24388ZINC FINGER PROTEINcoord: 1..131
NoneNo IPR availablePANTHERPTHR24388:SF50GROWTH FACTOR-INDEPENDENT 1A TRANSCRIPTION REPRESSOR B-RELATEDcoord: 1..131
NoneNo IPR availablePANTHERPTHR24388ZINC FINGER PROTEINcoord: 46..180
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 64..120
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 196..244
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 20..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:875410..877431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4122.t1Gchil4122.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 875410..877431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4122.t1 ID=Gchil4122.t1|Name=Gchil4122.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=674bp
MRTHTGERPHQCLFPLCGKSFLRKDHLTRHQYSHKQERPFPCTFPQCDKS
FATAQRLSRHRNLHNKPHPFKCDLCDQSFLKPHALDLHRATHAHSEPLTY
ACDAPNCQSVFSQHVRLQRHKAKCHTRTFTCVADNCTAPAFQTYSDLTRH
VRIVHEPRPVYQCKLCARQVRSAPALARHVAACETGSLVREHRCGYPHCG
AVYSSSGNLGTHIRSKHTNPGGFFCDSCDRRFSLKSSMERHKRTVHPPSS
NHSCFVCHTTLLSADHLRTHLAERHNVQQTTSPTPLILNKPPPLILESPL
HPSSVEHPYVPDRNPQPVINHANARPDANHPYAESDKLVNISEPPPPGMS
LRVPAQSASFSITQQHKPQLIGERPNVTQCPPISDLRMSLAMDSSIFDQR
MRHERSVEHAVNPLQPNSGFSATEGSPAAKRRCLNPDVTVPSSAALEGKL
SENVMHINPNDVNSYGPFHNSLRVWENNAQSSLRLPGQTDKHENTRHNVS
PSAISTLFPRDESTPTVSPQSCVMDYGRVQGMEETNSIRQAVSDQRHNCS
QQETRVQADCSEANEHAYRTQPPATCGFTNQSKTPPLALGSPNPTLQDLF
VAGSAPAGTYYGDSRDIAPQDSVPVNHNVPQEATPQRGPLAEESREPAPP
PLVNNSEERSADRVGFRVMTARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf