Gchil4113.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil4113.t1
Unique Name	Gchil4113.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	84

Homology

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BLAST of Gchil4113.t1 vs. uniprot
Match: A0A2V3IHG0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG0_9FLOR)

HSP 1 Score: 120 bits (300), Expect = 6.580e-34
Identity = 60/79 (75.95%), Postives = 66/79 (83.54%), Query Frame = 0

Query:    1 MKLPKLKLPTIITTREGTGQKEIIGLTPGEWVKSTVALCVLYAILAGFFAVLLVIAQTIRNKGDYYVIPGTDDLGVDFE 79
            MKLPK+KLPTIITTRE TGQKEI+GLTP EWV ST  LC LYA+LAG+F  LLVIAQ IRN  DY V+PGTDDLG+D E
Sbjct:    1 MKLPKIKLPTIITTREETGQKEIVGLTPKEWVVSTGVLCGLYAVLAGYFTALLVIAQKIRNDRDYLVVPGTDDLGIDDE 79

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BLAST of Gchil4113.t1 vs. uniprot
Match: A0A1X6P7A5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7A5_PORUM)

HSP 1 Score: 67.8 bits (164), Expect = 3.660e-13
Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 0

Query:    3 LPKLKLPTIITTREGTGQKEIIGLTPGEWVKSTVALCVLYAILAGFFAVLLVIAQTIRNKGDYYVIPG 70
            LPKL  P     R   G+ + IGLT  EW+ +TVAL +LYAILAGFFAVLL+IA  IR+ GD +  PG
Sbjct:    8 LPKLSNPF---QRREDGKMQFIGLTAMEWITTTVALVLLYAILAGFFAVLLIIANKIRHNGDSFERPG 72

The following BLAST results are available for this feature:

BLAST of Gchil4113.t1 vs. uniprot

BLAST of Gchil4113.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IHG0_9FLOR	6.580e-34	75.95	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A1X6P7A5_PORUM	3.660e-13	55.88	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 57..83
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..34
None	No IPR available	TMHMM	TMhelix		coord: 34..56

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004373_pilon	contig	tig00004373_pilon:852696..853053 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil4113.t1	Gchil4113.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004373_pilon 852696..853053 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil4113.t1 ID=Gchil4113.t1|Name=Gchil4113.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=84bp
MKLPKLKLPTIITTREGTGQKEIIGLTPGEWVKSTVALCVLYAILAGFFA
VLLVIAQTIRNKGDYYVIPGTDDLGVDFENEDE*