Gchil4061.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4061.t1
Unique NameGchil4061.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length623
Homology
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A2V3IRT5_9FLOR (Bromodomain and PHD finger-containing protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRT5_9FLOR)

HSP 1 Score: 645 bits (1664), Expect = 6.920e-225
Identity = 367/609 (60.26%), Postives = 425/609 (69.79%), Query Frame = 0
Query:    1 MAPSRPPRAPARVLRDPKELLKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNSIYFKEAVRLRALAARYYDDLIRALVKDGVAAALGLSRGGXXXXXXXXRLPPRRPPRPRSTDLSARLQSPSLLHSDMHSVDAXXXXXXXXXXXXXXXXXSRDVHLRRXXXXYDXXXXXXXXATHEARQAAHNAGLPDAPPSNEEPIFNGPNNELRDASSSQYDAPFPRKFSVLQSERIRDSCTQIPLAWRRIGRWHWRGATQPPILSEERARNVRYGLQFERFVTESAPMARRLLATVLDAHVVQQHDVALLEKGWSSGAGVVHAAEPGYRKKSAAPTANGMHGDGRKNGVTDAMDVQREETATKANGDGRTPKSRKRPRSNHETSLVNGDYTNRNGGAFAGQLKELIGHKRLKQVAAQRVEELYQSSLSVPPKQSIYRVRSLLRAKGIDPKFVSSLMTDDPVSYNAPSVGETHNNGTQDVMSTSHQRKIDMLLHSNYEIMMNVLRLRALRENCAESTVESVEDKERDSVERLADGLALAVRSLPPRLVVHSVDAAESALMMAETIAGRQ 609
            MAPSRPPRA     RDPKELLK+RGADL+RKISD+DRYGIFLQPVDVDAIDGYAQLIARPMDL+TCQNNLAMGVYRTPMELR DLDLIWSNCCTFNAD+SIYFKEAVRLRA+ ARYYDD ++ALVKDGVA ALGL R                         SARL     L        A                  RDVHLRR    YD        A HEARQAA  AGLPDAPP  E  IF GPNNE +D + +   A       + +S+R+R+SC+QIPLAWRRIGRWH RGATQ   L+ ERAR+VRYGL++E+FV +SAPMARRLLA++LD  VV+QHD+A +EK      G     E    KKS   T NG+H DG+KNGVTDAMDV +     KA+ D + PKS+KRPRS+ E +  NG + N    AF  QLK+LI  KR K V+ +RV+EL Q+SL VPPKQSIYRVRSLLR+KGIDPKFVS++MTDD  SY A    +  NN  QD ++ S QRK++ LL+SNY IMMNVLRLRALRE  AE+  ES+EDKERDSVE LA+GL+LAVRS+PPR VVH  DAAESAL MA++I  RQ
Sbjct:    1 MAPSRPPRAXXXXXRDPKELLKKRGADLIRKISDKDRYGIFLQPVDVDAIDGYAQLIARPMDLSTCQNNLAMGVYRTPMELRTDLDLIWSNCCTFNADDSIYFKEAVRLRAVCARYYDDFVKALVKDGVAPALGLYRAS-------------------GASSSARLPLEDHLAPAASVAHAASF---------------RDVHLRRARANYDAAVTAAAAAIHEARQAAQAAGLPDAPPPAEGQIFKGPNNEFQDNAPAHAAASSAIHTQLFRSQRLRESCSQIPLAWRRIGRWHSRGATQSAFLTTERARDVRYGLKYEQFVRDSAPMARRLLASILDPQVVRQHDLAQMEKLSKQTTGSSSRVEHTL-KKSGNLTPNGVHSDGKKNGVTDAMDVDKP---AKASYD-KLPKSKKRPRSSTELATANGVHMNATSSAFGEQLKDLIEPKRFKHVSPKRVDELSQASLHVPPKQSIYRVRSLLRSKGIDPKFVSAIMTDDAESYCA----DAQNNVAQDGVAASQQRKMEQLLNSNYAIMMNVLRLRALREGAAETMQESIEDKERDSVEMLANGLSLAVRSVPPRFVVHPADAAESALCMAQSINERQ 566          
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A2V3IZV9_9FLOR (Bromodomain and PHD finger-containing protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV9_9FLOR)

HSP 1 Score: 146 bits (368), Expect = 1.070e-37
Identity = 74/113 (65.49%), Postives = 83/113 (73.45%), Query Frame = 0
Query:    1 MAPSRPPRAPARVLRDPKELLKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNSIYFKEAVRLRALA 113
            MAPSR PRAP  VLRDPK+LLK+   +LL+  SDRD Y IFLQPVD   ID YA+L   P DL+ C  NLAMGVYRT M LRAD DL+W NCCTFNAD+SIYFK A+  R  A
Sbjct:    1 MAPSRQPRAPTCVLRDPKDLLKKGSNNLLKNFSDRDGYYIFLQPVDFIDIDSYAELFVHPPDLSVCHRNLAMGVYRTLMNLRADRDLMWCNCCTFNADDSIYFKGAMCSRQFA 113          
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A2V3ITY5_9FLOR (Histone acetyltransferase GCN5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITY5_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 2.480e-31
Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 0
Query:    5 RPPRAPARVLRDPKELLKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNSIYFKEAV 107
            RP R P RVL D K+ LK+RG +LL K+S  D Y +FLQ VD  AI+GYA++ A PM+L+ C  NLAMGVYR  M+LRADLDLIW NCCTFNA++SIYFKEA+
Sbjct:   44 RPLRVPTRVLGDLKKQLKKRGNNLLGKVSYCDGYWMFLQHVDFVAINGYAEVFAHPMELSICHYNLAMGVYRMLMKLRADLDLIWYNCCTFNANDSIYFKEAM 146          
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A7S1TI14_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI14_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 7.910e-24
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   25 GADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNSIYFKEAVRLRALA 113
            G ++L K+ ++DRY IF +PVD + + GY ++I  PMDLATC+N L  G Y     +R D+DLIWSNCCTFN  ++++FKEAV+LR  A
Sbjct:   13 GTEILDKLVEKDRYQIFWEPVDPNIVVGYLEVIKNPMDLATCRNKLESGEYANLDAMRRDVDLIWSNCCTFNPRDTVFFKEAVKLREFA 101          
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A7S3E9V9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9V9_9RHOD)

HSP 1 Score: 99.4 bits (246), Expect = 6.650e-18
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = 0
Query:   21 LKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNSIYFKEAVRLRALAARYYDDLIRALVKDGVAAALG 134
            +K +G +++ K+S  D Y IF +PVD + + GY  +I  PMDL T +  L  G Y +   L AD+DLIWSNCCTFN  ++++FK AV+LR  + +Y+  +     K+ +  + G
Sbjct:   27 IKGKGNEIVDKLSRADVYNIFAEPVDPNEVVGYLTIIKSPMDLGTVRQKLESGKYSSLDNLEADVDLIWSNCCTFNPPSTVFFKNAVKLRTQSEKYFRAVRDYFAKNQIPTSTG 140          
BLAST of Gchil4061.t1 vs. uniprot
Match: R7Q6X1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6X1_CHOCR)

HSP 1 Score: 94.4 bits (233), Expect = 2.690e-16
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 0
Query:    5 RPPRAPARVLRDPK---ELLKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADN--SIYFKEAVRLRALAARYYDDLIRALVKD 127
            RPP AP      P    E  +RR  D+L +++ +D   IFL+PV+ D +DGYA+ I RPMDL T +  L    YR+  E R DLDLIWSNC  FN     +I+ + A+ LR L  +      + L KD
Sbjct:   37 RPPNAPRDGRERPPPLPECFRRRCTDVLDRLNKKDHLNIFLEPVNTDEVDGYAETIKRPMDLTTMRTKLGKQSYRSLGEFRRDLDLIWSNCLLFNGKEPTNIFSRTAIELRRLTEKLIASTRQHLEKD 164          
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A5J4YHT9_PORPP (Bromodomain-containing protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHT9_PORPP)

HSP 1 Score: 92.0 bits (227), Expect = 5.120e-16
Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   21 LKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPM-ELRADLDLIWSNCCTFNADNSIYFKEAVRLRALAARYYDDLIRALVKDGVAAALGLSRG 138
            L++ G   + ++  RD+   F QPV +D +  Y  ++  PMDL T +  LA G Y T   +LR D++LIW+NCC +NA +S Y+K+A RL+AL  + +  L+  L   GV+ + G + G
Sbjct:   91 LRKYGLAWVDRMIRRDKSSYFTQPVPLDLVPDYLSIVETPMDLGTLRERLASGTYYTDAAKLRDDMELIWNNCCKYNASSSDYYKKAQRLKALMKQSFPQLVAKLQATGVSTSGGGASG 209          
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A7S0BFQ3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFQ3_9RHOD)

HSP 1 Score: 81.6 bits (200), Expect = 4.460e-15
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   21 LKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNSIY 102
            +K +G +++ K+S  D Y IF +PVD + + GY  +I  PMDL T +  L  G Y +   L AD+DLIWSNCCTFN   +++
Sbjct:   27 IKGKGIEIVDKLSRADVYNIFAEPVDPNEVVGYLTIIKSPMDLGTVRQKLETGKYSSLDNLEADIDLIWSNCCTFNPPATVF 108          
BLAST of Gchil4061.t1 vs. uniprot
Match: M2XV88_GALSU (DNA-binding bromodomain-containing protein isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XV88_GALSU)

HSP 1 Score: 88.6 bits (218), Expect = 4.590e-15
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 0
Query:   15 RDPKELLKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNSIYFKEAVRLRALAARYYDDLIRALVKDGV 129
            R+P+  L   G ++L K+  RD   IF +PVD   +  Y  ++ +PMDL T +  L    Y    ELR D+DLIW NCC +NA ++ ++  AV+LR +  + ++ L  A  + G+
Sbjct:   22 REPQHCLIVAGNEILEKLGKRDTQDIFAEPVDTSVVTDYLTIVKKPMDLGTVREKLNRAQYTCVEELREDIDLIWDNCCLYNAPDTEFYLLAVKLREVTVKLFEQLEVAFQEIGL 136          
BLAST of Gchil4061.t1 vs. uniprot
Match: A0A2V3IRT2_9FLOR (Bromodomain and PHD finger-containing protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRT2_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 8.980e-14
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 0
Query:    5 RPPRAPARVLRDPKEL---LKRRGADLLRKISDRDRYGIFLQPVDVDAIDGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADN--SIYFKEAVRLRALAARYYDDLIRALVKD 127
            RPP AP      P  L    K R +D+L ++S +D Y IFL+PV    + GY  +I RPMDL+T ++ L    Y++  E R DLDLIWSNC  FN     +++ K+A+ LR L  +      + L KD
Sbjct:   33 RPPNAPRDGRERPPSLAECFKHRCSDVLDRLSKKDHYDIFLEPVK--GVAGYHDIIKRPMDLSTVRSKLTSAEYKSLGEFRKDLDLIWSNCLLFNGKEPTNVFSKKAIELRRLTDKLIVTTRQQLEKD 158          
The following BLAST results are available for this feature:
BLAST of Gchil4061.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRT5_9FLOR6.920e-22560.26Bromodomain and PHD finger-containing protein 3 n=... [more]
A0A2V3IZV9_9FLOR1.070e-3765.49Bromodomain and PHD finger-containing protein 3 n=... [more]
A0A2V3ITY5_9FLOR2.480e-3164.08Histone acetyltransferase GCN5 n=1 Tax=Gracilariop... [more]
A0A7S1TI14_9RHOD7.910e-2451.69Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S3E9V9_9RHOD6.650e-1839.47Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R7Q6X1_CHOCR2.690e-1641.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YHT9_PORPP5.120e-1637.82Bromodomain-containing protein 1 n=1 Tax=Porphyrid... [more]
A0A7S0BFQ3_9RHOD4.460e-1543.90Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
M2XV88_GALSU4.590e-1535.65DNA-binding bromodomain-containing protein isoform... [more]
A0A2V3IRT2_9FLOR8.980e-1439.84Bromodomain and PHD finger-containing protein 3 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 50..66
score: 38.24
coord: 66..84
score: 22.54
coord: 84..103
score: 31.52
IPR001487BromodomainSMARTSM00297bromo_6coord: 14..122
e-value: 3.0E-22
score: 89.9
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 28..106
e-value: 1.3E-17
score: 63.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 33..103
score: 14.1686
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 15..129
e-value: 3.0E-26
score: 93.4
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 4..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..423
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 14..228
NoneNo IPR availablePANTHERPTHR22881:SF11LD22651Pcoord: 14..228
NoneNo IPR availableCDDcd04369Bromodomaincoord: 21..117
e-value: 9.3506E-24
score: 93.9762

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:297878..299746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4061.t1Gchil4061.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 297878..299746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4061.t1 ID=Gchil4061.t1|Name=Gchil4061.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=623bp
MAPSRPPRAPARVLRDPKELLKRRGADLLRKISDRDRYGIFLQPVDVDAI
DGYAQLIARPMDLATCQNNLAMGVYRTPMELRADLDLIWSNCCTFNADNS
IYFKEAVRLRALAARYYDDLIRALVKDGVAAALGLSRGGGGGPSSSARLP
PRRPPRPRSTDLSARLQSPSLLHSDMHSVDADADTQSASASASAAHASSR
DVHLRRARASYDAAVAAAASATHEARQAAHNAGLPDAPPSNEEPIFNGPN
NELRDASSSQYDAPFPRKFSVLQSERIRDSCTQIPLAWRRIGRWHWRGAT
QPPILSEERARNVRYGLQFERFVTESAPMARRLLATVLDAHVVQQHDVAL
LEKGWSSGAGVVHAAEPGYRKKSAAPTANGMHGDGRKNGVTDAMDVQREE
TATKANGDGRTPKSRKRPRSNHETSLVNGDYTNRNGGAFAGQLKELIGHK
RLKQVAAQRVEELYQSSLSVPPKQSIYRVRSLLRAKGIDPKFVSSLMTDD
PVSYNAPSVGETHNNGTQDVMSTSHQRKIDMLLHSNYEIMMNVLRLRALR
ENCAESTVESVEDKERDSVERLADGLALAVRSLPPRLVVHSVDAAESALM
MAETIAGRQSAGAGGDGGGADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf