Gchil4043.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4043.t1
Unique NameGchil4043.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length128
Homology
BLAST of Gchil4043.t1 vs. uniprot
Match: A0A2V3IRU1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU1_9FLOR)

HSP 1 Score: 193 bits (490), Expect = 1.850e-61
Identity = 95/126 (75.40%), Postives = 110/126 (87.30%), Query Frame = 0
Query:    1 MGQLVRSLAAARQAKELFKTLQKVTVTANPFDYRSTTAREFLRRVRTPPVKRSNPKLLTELTITEEYGNPTIELLYGDGFQQKIQTSGLKIMDIMDEVERVARWKGEGVHNPFEELREKRAKILGL 126
            MGQLVRS+AA+RQAKELFK LQKV VT NPFD+R+TTAREFLRRVRTPPVK++NPKL TEL ++EEYGN  IELLY DG +Q+I TSG+KI+DI+DEVER ARWKG+G  NPF +LRE RAK LGL
Sbjct:    1 MGQLVRSVAASRQAKELFKALQKVNVTVNPFDHRATTAREFLRRVRTPPVKKANPKLKTELILSEEYGNANIELLYADGHKQRIHTSGMKIVDIIDEVERFARWKGDGAQNPFGKLREARAKELGL 126          
BLAST of Gchil4043.t1 vs. uniprot
Match: R7Q508_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q508_CHOCR)

HSP 1 Score: 95.5 bits (236), Expect = 7.860e-23
Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0
Query:    1 MGQLVRSLAAARQAKELFKTLQKVTVTANPFDYRSTTAREFLRRVRTPPVKRSNPKLLTELTITEEYGNPTIELLYGDG 79
            MGQLVR++AA+R++ ELFKTL+ V V  NPFD+RSTTAREFLRRVR+P V+ +N KL  ++ + EEYG  TI L Y  G
Sbjct:    1 MGQLVRAVAASRKSSELFKTLRAVRVELNPFDHRSTTAREFLRRVRSPAVREANAKLKVDVHLIEEYGRATIGLEYACG 79          
BLAST of Gchil4043.t1 vs. uniprot
Match: M1V6K7_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V6K7_CYAM1)

HSP 1 Score: 68.9 bits (167), Expect = 1.710e-12
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:    1 MGQLVRSLAAARQAKELFKTLQKVTVTANPFDYRSTTAREFLRRVRTPPVKRSNPKLLTELTITEEYGNPTIELLYG--DGFQQKIQTSGLKIMDIMDEV 98
            MGQL  +L   R    LF+ + K  V  +P+DYRS +AREFLRRV +P V+R+NP+L+ E T+ +  G+   EL+    DG    +Q   + +  I  E+
Sbjct:    1 MGQLGVALRTLRSNVNLFRAIAKCQVAFDPYDYRSVSAREFLRRVNSPRVRRANPRLVVEATVRDGGGSGGAELVISFLDGRTLTLQPLDVDVKTIEREI 100          
BLAST of Gchil4043.t1 vs. uniprot
Match: UPI001F03FDE6 (uncharacterized protein LOC124459625 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03FDE6)

HSP 1 Score: 55.5 bits (132), Expect = 1.640e-7
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   19 KTLQKVTVTANPFDYRSTTAREFLRRVRTPPVKRSNPKLLTELTITEEYGNPTIELLYGDGFQQKIQTSGLKIMDIMDE 97
            K + K+ V  NPF++++ +AREFLR V T  V+ SNPK L +  I+++   P IE+ + D      +TS +K+ +I+ +
Sbjct:   10 KLVSKILVVFNPFEWKTASAREFLRIVDTQAVRASNPKCLIQSEISKKV-EPKIEIHFADKDSLVFETSKVKVREILSQ 87          
BLAST of Gchil4043.t1 vs. uniprot
Match: A0A7S2K4L5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4L5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.320e-7
Identity = 29/82 (35.37%), Postives = 46/82 (56.10%), Query Frame = 0
Query:   17 LFKTLQKVTVTANPFDYRSTTAREFLRRVRTPPVKRSNPKLLTELTITEEYGNPTIELLYGDGFQQKIQTSGLKIMDIMDEV 98
            LFK + K+ VT NPFD R+T+AREFL R       ++N KL     +      P +EL + DG +++  + G    ++++EV
Sbjct:   13 LFKYVAKIDVTFNPFDKRTTSAREFLNRTSAKRFIQANSKLAITPHVVSTADPPRVELEFVDGSKKEFDSQGYFASEMLEEV 94          
The following BLAST results are available for this feature:
BLAST of Gchil4043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IRU1_9FLOR1.850e-6175.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q508_CHOCR7.860e-2360.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M1V6K7_CYAM11.710e-1239.00Uncharacterized protein n=2 Tax=cellular organisms... [more]
UPI001F03FDE61.640e-736.71uncharacterized protein LOC124459625 n=1 Tax=Xenia... [more]
A0A7S2K4L5_9STRA4.320e-735.37Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019716Ribosomal protein L53, mitochondrialPFAMPF10780MRP_L53coord: 29..79
e-value: 4.9E-8
score: 32.9
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 9..113
e-value: 3.1E-20
score: 73.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 21..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:218872..219426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4043.t1Gchil4043.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 218872..219426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4043.t1 ID=Gchil4043.t1|Name=Gchil4043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=128bp
MGQLVRSLAAARQAKELFKTLQKVTVTANPFDYRSTTAREFLRRVRTPPV
KRSNPKLLTELTITEEYGNPTIELLYGDGFQQKIQTSGLKIMDIMDEVER
VARWKGEGVHNPFEELREKRAKILGLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019716Ribosomal_L53_mit
IPR036249Thioredoxin-like_sf