Gchil4030.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4030.t1
Unique NameGchil4030.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length318
Homology
BLAST of Gchil4030.t1 vs. uniprot
Match: A0A2V3IRU4_9FLOR (DUF1664 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU4_9FLOR)

HSP 1 Score: 397 bits (1019), Expect = 6.100e-136
Identity = 210/316 (66.46%), Postives = 246/316 (77.85%), Query Frame = 0
Query:    1 MAALGVRSLALLFGAGFSGSYLYNHLDKARSIAARILREVEQNAGDGSKSDTAVHADVATSNLDSTPHLNELSRQLASLSREVNRSRSDQLLIMPSYKGSLGTITDIFNLIGWGVAAVSIGGVMYYVAYRKKFRLTDLAWVSQSTFTGTVEAMQKGITRVSGALGAVKREITLRLREVEGRVDGVKLALADQIDRDVGAVKEGVAEVGDEVAGVKNALGDVNERIDQLDNKIDFATSGIVALVKALSSVAPERIKPGSPFYDLRKFADLSDTNSANSGMLRHRLSAGGLRGLLTGEGGGDNEVVGKRRSMDLKSTV 316
            MAA+GVR+LA+LFGAGFSGSY+YNH+DKAR +AARILR+VE      + + +A  A  + S    +  L+ LSRQLASLS+EVNRSRSD LLIMPSYKGSL TITDIFNL+GW VAAVS+GGV+YYVAYRKKF+LTDLAWVSQSTF GTV+AMQKGITRVSGALGAVKR+IT R R++E  VD V+  L  QI++DVGAVK+GVAE                           +AT+GIVALVKALSSVAP+RIKPGSPFYDL+KFADLSDTN ANSGMLRHRLS GGLRGLL GEGG + +V  KR S+D+K+ +
Sbjct:    1 MAAIGVRTLAVLFGAGFSGSYVYNHMDKARVVAARILRQVEHEVASDANATSAATAPPSAS--AESAQLDTLSRQLASLSQEVNRSRSDHLLIMPSYKGSLATITDIFNLVGWAVAAVSVGGVVYYVAYRKKFKLTDLAWVSQSTFQGTVDAMQKGITRVSGALGAVKRDITRRFRQMEVHVDRVQTTLGKQIEQDVGAVKDGVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXYATNGIVALVKALSSVAPDRIKPGSPFYDLKKFADLSDTNPANSGMLRHRLSTGGLRGLLVGEGGTEKDVANKRNSLDMKNAI 314          
BLAST of Gchil4030.t1 vs. uniprot
Match: R7Q5A4_CHOCR (DUF1664 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5A4_CHOCR)

HSP 1 Score: 241 bits (614), Expect = 2.040e-74
Identity = 139/290 (47.93%), Postives = 200/290 (68.97%), Query Frame = 0
Query:   11 LLFGAGFSGSYLYNHLDKARSIAARIL--REVEQNAGDGSKSDTAVHADVATSNLDSTPHLNELSRQLASLSREVNRSRSDQLLIM-PS--YKGSLGTITDIFNLIGWGVAAVSIGGVMYYVAYRKKFRLTDLAWVSQSTFTGTVEAMQKGITRVSGALGAVKREITLRLREVEGRVDGVKLALADQIDRDVGAVKEGVAEVGDEVAGVKNALGDVNERIDQLDNKIDFATSGIVALVKALSSVAPERIKPGSPFYDLRKFADLSDTNSANSGMLRHRLSAGGLRGLLTG 295
            +LFGA + G+YLYN++D ARS+AAR+L   + E+N    + S++A  A  +TSN+D+      LS Q+  L+RE++R+R   ++++ PS   KGSL TI+DI NL+GW V AVS+GGV YYVA ++   L DLAWVSQ TF GTV AMQKGI+ VSGA+ AV+RE+  +LR +EG VD +  +L+ +I+ ++G VK  V  V  EV  VK+ + D   R +QLD K+D ATSGI+ALVK +S++APER++PG+PF++L++F + +         +  RLS  GL GLL+G
Sbjct:    1 MLFGASYGGTYLYNNMDHARSVAARLLLQHQTEENKNTSAGSESA--ASNSTSNIDA------LSAQMDVLAREMSRTRDHPVVLVGPSGPLKGSLATISDILNLLGWAVVAVSVGGVAYYVAVKRNVSLRDLAWVSQRTFAGTVGAMQKGISTVSGAVRAVRRELDEKLRMMEGHVDEMHDSLSGKIEDEIGGVKVDVNGVHKEVVCVKDRMDDFRIRFEQLDGKMDMATSGIMALVKVVSTLAPERLQPGTPFFELKRFMNSNPHEKIAGSSVVRRLSNRGL-GLLSG 281          
BLAST of Gchil4030.t1 vs. uniprot
Match: M2Y6S3_GALSU (DUF1664 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6S3_GALSU)

HSP 1 Score: 111 bits (278), Expect = 1.570e-24
Identity = 75/254 (29.53%), Postives = 132/254 (51.97%), Query Frame = 0
Query:    7 RSLALLFGAGFSGSYLYNHLDKARSIAARILREVEQNAGDGSKSDTAVHADVATSNLDSTPHLNELSRQLASLSREVNRS---------RSDQLLIMPSYKGSLGTITDIFNLIGWGVAAVSIGGVMYYVAYRKK----FRLTDLAWVSQSTFTGTVEAMQKGITRVSGALGAVKREITLRLREVEGRVDGVKLALADQIDRDVGAVKEGVAEVGDEVAGVKNALGDVNERIDQLDNKIDFATSGIVALVKALS 247
            R L L+ GAG SG+ LYNH+D   S    + R    +    +K+ T+      +S   ++  L  L+ Q+  LSREV++S         R   +  + +  G LG+   +F L        S+ G +  VA   K    F++ DLA+VS   F    E ++  +TRVSGAL  V++E+++++++VE +V    + L  ++  ++   +  +  VG +VA V++ +G+V +++++L NK+ FA  GI  L   +S
Sbjct:   10 RLLVLMIGAGISGATLYNHMDGVTSFFKEVSRAAIHSLTKPTKASTS------SSGQGNSEELQSLAEQITRLSREVSKSLAAVQESSSRQPLVTFVGNGPGRLGSSGFVFTL--------SVCGSVVVVAIVAKRFFGFQIWDLAYVSSRRFNQAFETLKGAVTRVSGALSQVQKELSVKIKQVEDKVVESNICLEQKLQDEMEETRRDIYTVGGDVAEVRSIVGNVEQQLEELQNKLRFANRGIYLLCTVVS 249          
BLAST of Gchil4030.t1 vs. uniprot
Match: A0A2I0WD92_9ASPA (DUF1664 domain-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WD92_9ASPA)

HSP 1 Score: 77.8 bits (190), Expect = 1.000e-12
Identity = 59/238 (24.79%), Postives = 119/238 (50.00%), Query Frame = 0
Query:    2 AALGVRSLALLFGAGFSGSYLYNHLDKARSIAARILREVEQNAGDGSKSDTAVHADVATSNLDSTPHLNELSRQLASLSREVNRSRSDQLLIMPSYKGSLGTITDIFNLIGWGVAAVSIGGVMYYVAYRKKFRLTDLAWVSQSTFTGTVEAMQKGITRVSGALGAVKREITLRLREVEGRVDGVKLALADQIDRDVGAVKEGVAEVGDEVAGVKNALGDVNERIDQLDNKIDFATSGI 239
            A +G+  +ALL GAG++GS L  +  K   I A +   ++    +GS SD+A                + +++Q++ L+ E+ +  S + + + +     G +T         V A ++G V Y   + K    +DL +V++ +    V +M K + +VS AL A KR +T R+  ++G++D  KL   D  D +V  V+  +  +G +++ ++  +  ++ +++ ++ K  F  +GI
Sbjct:    5 AGMGLSKVALLIGAGYTGSILVRN-GKLSDILAELQTLLKST--EGSDSDSA----------------DSVAQQVSRLAMEIRQLASARSITVVNGGSGQGNVTSFL------VPAATLGAVGYGYMWWKGLSFSDLMYVTKHSMANAVSSMTKHLEQVSNALAATKRHLTQRIEGLDGKLDEQKLMSKDIRD-EVTQVRGKLENIGFDLSSIQQIVYSMDGKMNTIERKQAFLCAGI 216          
The following BLAST results are available for this feature:
BLAST of Gchil4030.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IRU4_9FLOR6.100e-13666.46DUF1664 domain-containing protein n=1 Tax=Gracilar... [more]
R7Q5A4_CHOCR2.040e-7447.93DUF1664 domain-containing protein n=1 Tax=Chondrus... [more]
M2Y6S3_GALSU1.570e-2429.53DUF1664 domain-containing protein n=1 Tax=Galdieri... [more]
A0A2I0WD92_9ASPA1.000e-1224.79DUF1664 domain-containing protein n=1 Tax=Dendrobi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..231
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availablePANTHERPTHR46667OS05G0182700 PROTEINcoord: 8..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..106
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
IPR012458Domain of unknown function DUF1664PFAMPF07889DUF1664coord: 115..231
e-value: 7.1E-14
score: 51.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:135680..136633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4030.t1Gchil4030.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 135680..136633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4030.t1 ID=Gchil4030.t1|Name=Gchil4030.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=318bp
MAALGVRSLALLFGAGFSGSYLYNHLDKARSIAARILREVEQNAGDGSKS
DTAVHADVATSNLDSTPHLNELSRQLASLSREVNRSRSDQLLIMPSYKGS
LGTITDIFNLIGWGVAAVSIGGVMYYVAYRKKFRLTDLAWVSQSTFTGTV
EAMQKGITRVSGALGAVKREITLRLREVEGRVDGVKLALADQIDRDVGAV
KEGVAEVGDEVAGVKNALGDVNERIDQLDNKIDFATSGIVALVKALSSVA
PERIKPGSPFYDLRKFADLSDTNSANSGMLRHRLSAGGLRGLLTGEGGGD
NEVVGKRRSMDLKSTVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012458DUF1664