Gchil4017.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4017.t1
Unique NameGchil4017.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length303
Homology
BLAST of Gchil4017.t1 vs. uniprot
Match: A0A2V3IZ37_9FLOR (Fatty-acid-binding protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ37_9FLOR)

HSP 1 Score: 238 bits (608), Expect = 4.560e-74
Identity = 123/203 (60.59%), Postives = 150/203 (73.89%), Query Frame = 0
Query:  101 ARVEPHTGVHFPATLSPTAHLLGLGARYMGGVVKVYAAGIYVHPTHARRALRAWRRFSAPELLRADPLWTVLCTHAAVPTV--VRLVVARQVLGSHMQNGFERQLLHRVARAAKMGGACRPVECKAHAKRFCALFANVGTMKVGSDVRIALDDDLVTLTVDGRLLGEIRSKQLASSLLDMFLGPKAVVEGLRHDVANGLEHLL 301
            +RVE  TGVHFP T+S    L+G+GAR+M G+VKVYA G+Y+    AR +LR W  F   ++L A PLW  L   A    V  VR+VV RQV+GSHMQ+GFERQL+ RV   AK GG CRP +CKA AKRFCALF  VGTMKVGSDVRIA+D D+V+L+VDGR+LGE+RSKQLA +++DMFLG ++VV GLR DVA GL   L
Sbjct:  103 SRVEHDTGVHFPTTISSAQQLVGVGARFMRGLVKVYAVGVYLDAVSARHSLRNWSGFDVDDILEAQPLWNALVEGAPALGVRTVRMVVVRQVVGSHMQHGFERQLIPRVLHIAKRGG-CRPADCKADAKRFCALFCLVGTMKVGSDVRIAVDADVVSLSVDGRVLGEVRSKQLAVAVMDMFLGDRSVVNGLRRDVAVGLHQWL 304          
BLAST of Gchil4017.t1 vs. uniprot
Match: R7Q844_CHOCR (Chalcone-flavanone somerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q844_CHOCR)

HSP 1 Score: 178 bits (452), Expect = 9.910e-51
Identity = 96/202 (47.52%), Postives = 125/202 (61.88%), Query Frame = 0
Query:  102 RVEPHTGVHFPATLSPTAHLLGLGARYMGGVVKVYAAGIYVHPTHARRALRAWRRFSAPELLRADPLWTVLC-THAAVPTVVRLVVARQVLGSHMQNGFERQLLHRVARAAKMGGACRPVECKAHAKRFCALFANVGTMKVGSDVRIALDDDLVTLTVDGRLLGEIRSKQLASSLLDMFLGPKAVVEGLRHDVANGLEHLLR 302
            + E  TGV FP T +    L G G R MGG+V+VYA G+Y   +  R AL  W+ FS  E+L +D LW  +C  +++     R VV R+V G HM+ GFER L  RVA+A K G  C+P ECK   K+F  +F  VGTMKVGS+  + LD D V+LT+DGR +GE+R+ QL+ ++ DMFLG  AV   LR   A  LE LLR
Sbjct:   98 KTENATGVQFPITFNDAGTLHGTGVRLMGGLVRVYALGLYADRSALRDALSNWKGFSREEILSSDALWDSVCDVNSSFTRTFRFVVVREVGGRHMRTGFERGLAPRVAKAVKKG-RCKPSECKKATKKFADMFLGVGTMKVGSEAVVVLDGDKVSLTIDGRWMGEVRNPQLSWAMADMFLGGNAVAPTLRVSAAETLEMLLR 298          
BLAST of Gchil4017.t1 vs. uniprot
Match: UPI0009E414A7 (fatty-acid-binding protein 1 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E414A7)

HSP 1 Score: 69.3 bits (168), Expect = 6.470e-10
Identity = 56/206 (27.18%), Postives = 101/206 (49.03%), Query Frame = 0
Query:  103 VEPHTGVHFPATLSPTAHLLGLGARYMG--GV--VKVYAAGIYVHPTHARRALRAWRRFSAPELLRADPLWT-VLCTHAAVPTVVRLVVARQVLGSHMQNGFERQLLHRVARAAKMGGACRPVECKAHAKRFCALFANVGTMKVGSDVRIALDDDLVTLT-VDGRLLGEIRSKQLASSLLDMFLGPKAVVEGLRHDVANGLEHLLR 302
            VEP TGV FP+ +     LLG+G R     G+  + VYA G+Y      ++  + +   S  E   +   ++ VL     +   +++V  R  +GS +++ FE  + +R+ + +  G        K    RF +LF +   +  GS + ++ +   V  T +DG+ +G+I+SK L  S+LD+++G     +  + D   GL  LL+
Sbjct:   90 VEPKTGVIFPSVVDGARRLLGIGLRKKNVFGLKNIDVYAFGVYAEVDDVKKLRKKYGVLSDSEFRGSKEFFSDVLDQDIRMTVKLQIVYGRLTIGS-VRSAFEESVGNRLKKFSSSGN-------KDLLNRFTSLFRDEYKLPRGSVIDLSREQGYVLRTRIDGKEVGDIQSKLLCQSILDLYIGDDPFDKKAKEDFEVGLISLLQ 287          
BLAST of Gchil4017.t1 vs. uniprot
Match: A0A804K8L2_MUSAM (Chalcone--flavanone isomerase n=2 Tax=Musa TaxID=4640 RepID=A0A804K8L2_MUSAM)

HSP 1 Score: 63.5 bits (153), Expect = 5.850e-8
Identity = 54/206 (26.21%), Postives = 98/206 (47.57%), Query Frame = 0
Query:  103 VEPHTGVHFPATLSPTAHLLGLGARYMGGV----VKVYAAGIYVHPTHARRALRAWRRFSAPELLR-ADPLWTVLCTHAAVPTVVRLVVARQVLGSHMQNGFERQLLHRVARAAKMGGACRPVECKAHAKRFCALFANVGTMKVGSDVRIALDDDLVT-LTVDGRLLGEIRSKQLASSLLDMFLGPKAVVEGLRHDVANGLEHLLR 302
            VEP TG  FP  L     L G+G R    +    + VYA G+Y   +  +     +  FS  EL    + +  VL     +   +++V  R  +GS ++N F + +  R+    K  G+    + +   +RF +LF +   +  GS + ++ +   V  + + G+ +GEI+SK L  S+LD++ G     +  + D+ +GL  +L+
Sbjct:   80 VEPRTGAAFPTVLDGGRRLTGIGLRKTSVLGLKNIDVYAFGVYADDSDMKGLREKYGTFSVSELEENKEFISDVLDQDLRMTVRLQIVYNRLSIGS-VRNAFAKTVGSRMQ---KFSGS----DNRELLQRFTSLFKDEYKLPRGSVIDLSREQGYVLQIRIGGKEVGEIQSKLLCKSVLDLYFGEDPFDKRAKEDIQSGLASILQ 277          
BLAST of Gchil4017.t1 vs. uniprot
Match: A0A833R7M8_9POAL (Chalcone--flavanone isomerase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R7M8_9POAL)

HSP 1 Score: 57.8 bits (138), Expect = 5.170e-6
Identity = 50/210 (23.81%), Postives = 95/210 (45.24%), Query Frame = 0
Query:  103 VEPHTGVHFPATLSPTAHLLGLGARYMGGV----VKVYAAGIYVHPTHARRALRAWRRFSAPELLRADPLWTVLCTHAAVPTVVRLVVARQVLGSHM-----QNGFERQLLHRVARAAKMGGACRPVECKAHAKRFCALFANVGTMKVGSDVRIALDDDLVTLT-VDGRLLGEIRSKQLASSLLDMFLGPKAVVEGLRHDVANGLEHLLR 302
            VE  TG  FP  +     LLG+G R    +    + VYA G+Y      ++    +   S  EL     L        A+ + +R+ V  Q++   +     +N F + +  R+ + +    A  P +     ++F +LF +   +  GS + ++ ++  V  T +DG  +G+I+SK L  S+LD++LG   + +  + ++   L   L+
Sbjct:   76 VERKTGEVFPEEVDGGRRLLGVGVRRANVLGLKSIDVYAFGVYADDCDTKKLNEKYGATSLSELKDKKELIA-----DALESDIRMTVRLQIVYGRLSIRSVRNAFAKSVGTRLQKFS----ASEPSDTDQLLQKFVSLFKDEQKLPKGSVIELSREEGYVLRTRIDGSEVGQIQSKLLCKSILDLYLGEDPLDKSAKEEIQLNLASRLK 276          
BLAST of Gchil4017.t1 vs. uniprot
Match: A0A3M2AK49_9BACT (Chalcone_isomerase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2AK49_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 6.940e-6
Identity = 55/206 (26.70%), Postives = 92/206 (44.66%), Query Frame = 0
Query:  104 EPHTGVHFPATLS-----PTAHLLGLGARYMG-GVVKVYAAGIYVHPTHARRALRAWRRFSAPELLRADPLWTVLCTHAAVPTVVRLVVARQVLGSHMQNGFERQLLHRVARAAKMGGACRPVECKAHAKRFCALFANVGTMKVGSDVRIALDDD--LVTLTVDGRLLGEIRSKQLASSLLDMFLGPKAVVEGLRHDVANGLEHLL 301
            EP + V FP  +         HLL +G R      VKVYA G+Y+    A  ALR +R     +  ++   +  L  +      +R V+ R V G  +   F   L  R+ + A+          +A   RF   F++   ++ G+++  A      LVT  + G+++GE++S  LA +L D++LG   + E  +   A+ L   L
Sbjct:  113 EPRSEVEFPRWMDFPGGKQPLHLLAVGLRTKTIFAVKVYAFGLYLDARAAAAALRDYRGLRPKDRRKSRAFYRALL-NGDFSKGLRWVMTRDVDGEDIAEAFAESLEPRLEKLARSAKPEVVAADRAALARFKTFFSD--ELEEGTELVFAWHPGGRLVT-RIGGKVMGEVKSHNLALALFDVYLGSDPISEDAKEAFADALPGFL 314          
The following BLAST results are available for this feature:
BLAST of Gchil4017.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IZ37_9FLOR4.560e-7460.59Fatty-acid-binding protein 1 n=1 Tax=Gracilariopsi... [more]
R7Q844_CHOCR9.910e-5147.52Chalcone-flavanone somerase n=1 Tax=Chondrus crisp... [more]
UPI0009E414A76.470e-1027.18fatty-acid-binding protein 1 n=1 Tax=Phalaenopsis ... [more]
A0A804K8L2_MUSAM5.850e-826.21Chalcone--flavanone isomerase n=2 Tax=Musa TaxID=4... [more]
A0A833R7M8_9POAL5.170e-623.81Chalcone--flavanone isomerase n=1 Tax=Carex little... [more]
A0A3M2AK49_9BACT6.940e-626.70Chalcone_isomerase domain-containing protein n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016089Chalcone isomerase, orthogonal bundle domain superfamilyGENE3D1.10.890.20coord: 146..294
e-value: 5.5E-32
score: 112.9
IPR016087Chalcone isomerasePFAMPF16035Chalcone_2coord: 168..294
e-value: 8.0E-7
score: 29.0
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 103..279
e-value: 5.5E-32
score: 112.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..49
NoneNo IPR availablePANTHERPTHR47284:SF3FATTY-ACID-BINDING PROTEIN 2coord: 67..302
NoneNo IPR availablePANTHERPTHR47284FATTY-ACID-BINDING PROTEIN 2coord: 67..302
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..302
IPR036298Chalcone isomerase superfamilySUPERFAMILY54626Chalcone isomerasecoord: 103..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:512539..513447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4017.t1Gchil4017.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000081_pilon 512539..513447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4017.t1 ID=Gchil4017.t1|Name=Gchil4017.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=303bp
MAALQLRALRLRALVAAALRPPSSSLPPSSLPPSSLPPSSLPLRSAPPPP
ARAPPLALALAAAAAAAAAATTAAHADPTPPHLVALDADADADTDTDAAA
ARVEPHTGVHFPATLSPTAHLLGLGARYMGGVVKVYAAGIYVHPTHARRA
LRAWRRFSAPELLRADPLWTVLCTHAAVPTVVRLVVARQVLGSHMQNGFE
RQLLHRVARAAKMGGACRPVECKAHAKRFCALFANVGTMKVGSDVRIALD
DDLVTLTVDGRLLGEIRSKQLASSLLDMFLGPKAVVEGLRHDVANGLEHL
LR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016089Chalcone_isomerase_bundle_sf
IPR016087Chalcone_isomerase
IPR016088Chalcone_isomerase_3-sand
IPR036298Chalcone_isomerase_sf