Gchil3732.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3732.t1
Unique NameGchil3732.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length648
Homology
BLAST of Gchil3732.t1 vs. uniprot
Match: A0A2V3J647_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J647_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 3.080e-61
Identity = 197/579 (34.02%), Postives = 294/579 (50.78%), Query Frame = 0
Query:   79 DASLLDDSPFVDDAFASEVAPGLSHFSSSPIFPPIDEDPVWAVS--NHPHLPAPPMLTDDPAVMSHQLSHSNFNSPSLRPAPQLSPPPPLPFFDDRSHSPP-VNPALSLQQ-----PSVAHFADLQFPPHIHS---HIHSYQPPQPSNQQRSVSPSSNNNRVTHNVTRTICHTSSPPRPTPVTSRVNKTQRKKRQSSSRASRTTAKSMPQLVVHPSRTQQP-LXXXXXXXXXXXXXXIPSPLSKSPPPHLSNLPQIPSSTTPTTAATPSTTNSVQRSPPRTPYPIVSSKPLSIVPHQQQQPNSTIQPLPNNSSHPNLSAQLSSHTVLTNSPSNHSKSQYNTGSTSTRHAASHSAKPARTTKPRDKLSRVTKLIKCRTKEQLVDQMLRLLRASEISEDLVRGTLAPIDISHYVSQCRLQYDLVYKLLSERRNPPSSAYDSLAYNRCKPALLSFKNLVSDFGRMFIEAAVWMDVLRFCLLAAQMNAQLPEWREHQYNKTKLQLHTKLEQFATRAVNYLAKMKQSPLVDAHDATELVEMYQRLLPSVATKLNNVLAILRPVNVSVLQGQKQSSERPTNTDSS 645
            D+S   D    DD+  +  +P  ++   S I    D D +W  S  + P LPA P       V+S          P  +P P LS       F ++S SP  ++P L+ Q      P+ A    L     +HS   H+ S  P  P++                  + T  + SSP  P+   S + K   +++  +    R   KS+     HPSRT  P +              +P+  + S  P  + L  +PSSTTPTTAATP                      +++ P   + P++ +Q   NN SHP+ SA  SSH+VLTN+ S  SKSQ  +GSTST+H   H AK A+TTKPRDK S++ K +KC TKEQL + M++L+ +S + E  V   +  +DI+H+V++C+   D ++++LS+     S   D+ AY +CK AL++FKN+VS  GR  IEA++W+DV+R+C+ AAQ+NAQ P W +  +NKTK Q+H KL Q A RAV  L++ K++    A DA  L++  +   P VAT L  ++A  R + V +       S+ P NT+SS
Sbjct:   57 DSSFFADPTAFDDSALAVDSPAFANLGPSCIV--ADTDTIWTQSQPDQPQLPAHPQNALQSPVLS----------PRSQPQPALS-------FLEQSPSPSSLSPTLATQHSALYLPTPASAPALPPTAQLHSLPNHLPSSNPHPPTS------------------SHTTGNASSPSPPSRSDSCIRKPIPRRQPGTHHIRR--GKSLNNAHHHPSRTHAPSVQSNMLHNQPTEQHSLPAFQTPSQQP-TNLLHMLPSSTTPTTAATPXXXXXXXXXXXXXXXXXXXXXXIALAP--ARHPHNPLQSSSNNPSHPSQSAHFSSHSVLTNAASIQSKSQLTSGSTSTQHPPMH-AKSAKTTKPRDKYSKLRKRLKCCTKEQLFEHMMQLVHSSAVHEKAVLDNIPSVDINHFVAECQKSCDAIFRVLSDGEPLESLVPDANAYRKCKKALMAFKNVVSVMGRTLIEASLWIDVIRYCIPAAQINAQTPVWHDAAHNKTKSQVHAKLNQLAMRAVKALSRAKETAF--APDAVSLIDACRTPFPQVATSLAELVASGR-IQVGIPPVPHLGSQLP-NTESS 588          
The following BLAST results are available for this feature:
BLAST of Gchil3732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J647_9FLOR3.080e-6134.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013868Tethering factor for nuclear proteasome Cut8/Sts1PFAMPF08559Cut8coord: 397..599
e-value: 1.3E-19
score: 70.8
IPR038422Cut8/Sts1 superfamilyGENE3D1.20.58.1590Tethering factor for nuclear proteasome Cut8/Sts1coord: 420..625
e-value: 4.9E-21
score: 77.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:1077901..1079844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3732.t1Gchil3732.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025222_pilon 1077901..1079844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3732.t1 ID=Gchil3732.t1|Name=Gchil3732.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=648bp
MDVSELFASAPLHAWQQQPPPSIAALAAAAGDAAASAAAASAAAAAADPT
VSPSSPSSAPPFHTPATVPPSFSFPRTVDASLLDDSPFVDDAFASEVAPG
LSHFSSSPIFPPIDEDPVWAVSNHPHLPAPPMLTDDPAVMSHQLSHSNFN
SPSLRPAPQLSPPPPLPFFDDRSHSPPVNPALSLQQPSVAHFADLQFPPH
IHSHIHSYQPPQPSNQQRSVSPSSNNNRVTHNVTRTICHTSSPPRPTPVT
SRVNKTQRKKRQSSSRASRTTAKSMPQLVVHPSRTQQPLQPQPQPPHPPH
PTHIPSPLSKSPPPHLSNLPQIPSSTTPTTAATPSTTNSVQRSPPRTPYP
IVSSKPLSIVPHQQQQPNSTIQPLPNNSSHPNLSAQLSSHTVLTNSPSNH
SKSQYNTGSTSTRHAASHSAKPARTTKPRDKLSRVTKLIKCRTKEQLVDQ
MLRLLRASEISEDLVRGTLAPIDISHYVSQCRLQYDLVYKLLSERRNPPS
SAYDSLAYNRCKPALLSFKNLVSDFGRMFIEAAVWMDVLRFCLLAAQMNA
QLPEWREHQYNKTKLQLHTKLEQFATRAVNYLAKMKQSPLVDAHDATELV
EMYQRLLPSVATKLNNVLAILRPVNVSVLQGQKQSSERPTNTDSSVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013868Cut8/Sts1_fam
IPR038422Cut8/Sts1_sf