Gchil3677.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil3677.t1
Unique Name	Gchil3677.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	749

Homology

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BLAST of Gchil3677.t1 vs. uniprot
Match: R7QD49_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD49_CHOCR)

HSP 1 Score: 418 bits (1074), Expect = 6.410e-133
Identity = 234/539 (43.41%), Postives = 330/539 (61.22%), Query Frame = 0

Query:    1 MVAANRTGLWGFIILLAALAFLRSLAPEHTERAVLGLMKTTSTPRKDVDEEMRKLKDMKDELKRERIALEKLKDELEENXXXXXXXXXXXXXSNTSDDLEVIDSSTETETVSNDEIEEKREEHVEESANIADGSSTEQTYRENENADGEGKQETEDEEAYNSDHDVEPVQLADDECPVVVVPEYSKSGLGTQIEHVWTSLSVTLAVRNACVVLPPVVTDIGEEDVEI-VPFHEVFDLDELGRTGLRILPLSICNAPGVSHVFDDNGAESAIVKNFVSYVERSHPSLAERNALVHENTQAHRFPPIEETEGDVNRVATYIASKRGKGQGRECIGFGRMRSAIAFNGDVVEHFQSAKGINDFVSSRYPRMNETLFVKLRWNKAHCDEKRNEDGTVCILSGEILPTEDYVNSIAFAASTVGASKIYISAPPYVPPEVSDFISSKLMPADPVVLDVGSDFFTAGVVEREMAVRSRAFVPDGGAWGESVQEARRMHSPHLFKEGWNSVVMVEEWRNAGSPTELPIIMASYNHENNTEWERPDPA 538
            M +  R+ +WGFI LL ALAFLRSLAPE TE AV  L +     R  +  ++ +++ +KDEL+RER+AL++ K++L+                   D L             +   ++ REE         D S+ +       N D E +      +  + D D  P  L+DDECP++VVPE S +GLGTQIEH+WTSLS+TLA+RNACVV+P V++  G    +  VPFH+VFDL EL RTG+R +PL  C   G+++VFDD GAESAIVKNF  YV+ SHP+LA+   LV  +++ +RF   +    DVN VA Y+  K  +  GR C+G G MR+ IA N DV+ HF  AK I+D++  R+P +N TLFVKLRW+   CD+   ++GTVCI    I+P + YVN+IA AA  +GA+ IY++ P +VP +V+++I+  L   DPV+L+VG D FTA  +ERE+AVRS  FVPDGGAWG  VQ+ R+ H PH + E  +S+ M++ W++AGSPT   ++      + +T   +P  A
Sbjct:  104 MSSTRRSFVWGFIALLLALAFLRSLAPERTEYAVRNLFEFKDR-RSGLQPQLTEVQRLKDELQRERVALQRWKEQLDLRSQAQNDTHHNPRPVVRPDHLPAAPPDDPDAFTDDTNTQQGREE--------TDLSTPD-------NHDPEDESHPHSNDFDDVDEDAAP--LSDDECPIIVVPESSSTGLGTQIEHIWTSLSLTLAIRNACVVIPSVISSFGASQPDRPVPFHQVFDLPELARTGVRFVPLRTCQENGMTNVFDDRGAESAIVKNFALYVKESHPNLAKNTTLVRADSKGYRFLKSKLVNYDVNVVAEYMRDKLPEEPGRHCVGVGLMRAPIAINPDVLAHFFPAKHISDYIDERFPALNTTLFVKLRWSSTTCDKAHTKNGTVCIFLDSIVPVQTYVNAIAHAADMIGATAIYLAVPLHVPDDVTEYIAEHLNVMDPVLLEVGGDLFTANTLERELAVRSVGFVPDGGAWGNCVQKTRQSHFPHAYDENIDSITMIQNWKDAGSPTASSLLRDGVVKQQHTNTHKPQAA 624

The following BLAST results are available for this feature:

BLAST of Gchil3677.t1 vs. uniprot

BLAST of Gchil3677.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QD49_CHOCR	6.410e-133	43.41	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 628..643
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 528..748
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 547..561
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 720..739
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..748
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	TMHMM	TMhelix		coord: 7..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00025222_pilon	contig	tig00025222_pilon:570766..573012 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil3677.t1	Gchil3677.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00025222_pilon 570766..573012 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil3677.t1 ID=Gchil3677.t1|Name=Gchil3677.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=749bp
MVAANRTGLWGFIILLAALAFLRSLAPEHTERAVLGLMKTTSTPRKDVDE
EMRKLKDMKDELKRERIALEKLKDELEENNDQEEEAQQAEEKSNTSDDLE
VIDSSTETETVSNDEIEEKREEHVEESANIADGSSTEQTYRENENADGEG
KQETEDEEAYNSDHDVEPVQLADDECPVVVVPEYSKSGLGTQIEHVWTSL
SVTLAVRNACVVLPPVVTDIGEEDVEIVPFHEVFDLDELGRTGLRILPLS
ICNAPGVSHVFDDNGAESAIVKNFVSYVERSHPSLAERNALVHENTQAHR
FPPIEETEGDVNRVATYIASKRGKGQGRECIGFGRMRSAIAFNGDVVEHF
QSAKGINDFVSSRYPRMNETLFVKLRWNKAHCDEKRNEDGTVCILSGEIL
PTEDYVNSIAFAASTVGASKIYISAPPYVPPEVSDFISSKLMPADPVVLD
VGSDFFTAGVVEREMAVRSRAFVPDGGAWGESVQEARRMHSPHLFKEGWN
SVVMVEEWRNAGSPTELPIIMASYNHENNTEWERPDPAVDDQSSPSKIAP
EGDQPQSDPQSTENSEKEEGSPDSGNMDAVTLQPMPENVNEDGKSDPDTA
NAVLAQPEAERETNEANVGTEMEPGLEVENGMPEKDEQDIAPKPADITQE
PVPGTVPGGLSAEDGEQRPEEYEPPQAYMPNTETDHHLFPDGQIPAREVI
QEPGAAAEEEGEAADDTNQEPSVRAVQIRSGTGISDLPRQRSKSEQKT*