Gchil3677.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3677.t1
Unique NameGchil3677.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length749
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:570766..573012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3677Gchil3677Gracilaria chilensis NLEC103_M9 malegenetig00025222_pilon 570766..573012 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3677.t1.stop1Gchil3677.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025222_pilon 570766..570768 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3677.t1.CDS1Gchil3677.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025222_pilon 570766..573012 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3677.t1.exon1Gchil3677.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025222_pilon 570766..573012 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3677.t1.start1Gchil3677.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025222_pilon 573010..573012 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3677.t1Gchil3677.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025222_pilon 570766..573012 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3677.t1 ID=Gchil3677.t1|Name=Gchil3677.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=749bp
MVAANRTGLWGFIILLAALAFLRSLAPEHTERAVLGLMKTTSTPRKDVDE
EMRKLKDMKDELKRERIALEKLKDELEENNDQEEEAQQAEEKSNTSDDLE
VIDSSTETETVSNDEIEEKREEHVEESANIADGSSTEQTYRENENADGEG
KQETEDEEAYNSDHDVEPVQLADDECPVVVVPEYSKSGLGTQIEHVWTSL
SVTLAVRNACVVLPPVVTDIGEEDVEIVPFHEVFDLDELGRTGLRILPLS
ICNAPGVSHVFDDNGAESAIVKNFVSYVERSHPSLAERNALVHENTQAHR
FPPIEETEGDVNRVATYIASKRGKGQGRECIGFGRMRSAIAFNGDVVEHF
QSAKGINDFVSSRYPRMNETLFVKLRWNKAHCDEKRNEDGTVCILSGEIL
PTEDYVNSIAFAASTVGASKIYISAPPYVPPEVSDFISSKLMPADPVVLD
VGSDFFTAGVVEREMAVRSRAFVPDGGAWGESVQEARRMHSPHLFKEGWN
SVVMVEEWRNAGSPTELPIIMASYNHENNTEWERPDPAVDDQSSPSKIAP
EGDQPQSDPQSTENSEKEEGSPDSGNMDAVTLQPMPENVNEDGKSDPDTA
NAVLAQPEAERETNEANVGTEMEPGLEVENGMPEKDEQDIAPKPADITQE
PVPGTVPGGLSAEDGEQRPEEYEPPQAYMPNTETDHHLFPDGQIPAREVI
QEPGAAAEEEGEAADDTNQEPSVRAVQIRSGTGISDLPRQRSKSEQKT*
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spliced messenger RNA

>Gchil3677.t1 ID=Gchil3677.t1|Name=Gchil3677.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2247bp|location=Sequence derived from alignment at tig00025222_pilon:570766..573012- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGCCGCCAATCGCACTGGCTTGTGGGGGTTCATCATCTTGTTGGC
TGCTCTTGCGTTCCTTCGATCCTTGGCACCTGAGCACACAGAGCGAGCTG
TACTTGGTTTGATGAAAACGACAAGCACTCCACGTAAAGATGTAGACGAG
GAAATGAGGAAATTGAAGGATATGAAGGACGAACTAAAGCGAGAAAGAAT
CGCCTTGGAGAAATTGAAAGACGAACTTGAAGAGAATAATGACCAAGAAG
AAGAGGCCCAGCAAGCAGAAGAGAAATCCAATACGAGTGATGATCTTGAA
GTCATCGATTCTTCTACAGAAACAGAAACGGTTTCAAACGATGAAATCGA
GGAGAAACGAGAGGAACACGTTGAAGAAAGCGCTAACATTGCGGATGGTA
GCAGTACAGAACAAACATATCGAGAGAACGAAAACGCTGACGGTGAAGGG
AAACAGGAGACCGAGGACGAGGAAGCGTACAATTCAGATCACGATGTCGA
ACCAGTACAGCTTGCAGATGATGAATGCCCAGTCGTTGTGGTCCCAGAAT
ACTCCAAGTCTGGCCTCGGGACTCAAATTGAACACGTCTGGACCTCTTTA
TCAGTAACTCTTGCAGTTCGCAACGCTTGTGTTGTACTGCCTCCAGTCGT
AACAGATATTGGGGAGGAAGATGTGGAGATCGTACCTTTCCATGAGGTTT
TCGATTTGGACGAACTGGGCCGCACGGGTTTGCGAATTCTTCCCCTGTCT
ATATGCAATGCTCCTGGAGTTTCTCACGTATTCGACGACAATGGCGCGGA
AAGTGCAATTGTCAAGAACTTCGTCTCTTACGTCGAAAGAAGCCATCCAT
CGCTTGCAGAACGAAATGCCTTAGTACATGAGAACACCCAAGCACATCGT
TTCCCCCCAATCGAGGAAACGGAGGGCGACGTGAACAGAGTGGCAACATA
TATCGCATCAAAGAGAGGAAAGGGACAAGGACGCGAGTGCATTGGATTCG
GAAGAATGCGCTCTGCAATTGCATTCAACGGAGACGTTGTGGAACACTTT
CAGTCCGCGAAGGGCATCAACGACTTCGTTTCTTCCAGGTATCCAAGAAT
GAATGAAACTCTGTTCGTCAAACTACGTTGGAATAAGGCGCACTGCGACG
AAAAGCGAAACGAAGATGGAACAGTGTGTATACTTTCAGGGGAAATTCTT
CCGACTGAGGACTACGTGAATAGTATTGCTTTCGCCGCCTCGACTGTTGG
AGCATCAAAAATCTACATATCTGCGCCTCCATATGTACCACCGGAGGTCA
GTGACTTCATATCTTCTAAGCTCATGCCTGCGGATCCTGTTGTGCTTGAT
GTGGGGTCAGACTTCTTCACTGCCGGTGTAGTAGAGCGGGAAATGGCTGT
GAGATCTAGAGCGTTTGTTCCAGATGGTGGAGCTTGGGGCGAATCAGTGC
AAGAAGCCCGAAGAATGCATTCCCCGCATCTCTTTAAAGAAGGATGGAAT
TCTGTAGTCATGGTGGAGGAGTGGAGGAATGCAGGCTCGCCGACGGAATT
GCCTATCATCATGGCGTCATATAATCACGAAAACAACACCGAGTGGGAAA
GGCCAGATCCAGCGGTTGATGACCAGAGTTCTCCCTCTAAAATAGCTCCA
GAAGGTGATCAACCACAATCTGATCCACAAAGCACTGAGAATTCCGAAAA
AGAAGAAGGCTCGCCAGACTCCGGAAATATGGACGCTGTGACCTTGCAAC
CCATGCCTGAGAACGTCAACGAAGACGGCAAGTCAGACCCAGACACCGCC
AATGCTGTCCTCGCACAGCCCGAAGCAGAACGCGAGACGAATGAGGCCAA
CGTTGGCACCGAAATGGAACCTGGGCTTGAGGTCGAAAACGGTATGCCTG
AAAAAGACGAACAGGATATCGCCCCTAAACCCGCTGACATTACACAAGAA
CCAGTACCTGGCACCGTGCCTGGAGGGTTGTCGGCTGAGGACGGAGAGCA
ACGTCCAGAGGAGTACGAGCCCCCCCAAGCTTACATGCCAAACACGGAGA
CCGACCATCACCTTTTCCCGGACGGACAGATCCCCGCAAGAGAAGTTATC
CAAGAACCAGGAGCCGCTGCAGAAGAGGAAGGCGAGGCGGCTGATGATAC
GAACCAAGAGCCCAGCGTACGCGCAGTGCAAATAAGAAGCGGTACTGGTA
TAAGTGACCTACCACGTCAAAGAAGCAAAAGTGAACAAAAGACATGA
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protein sequence of Gchil3677.t1

>Gchil3677.t1 ID=Gchil3677.t1|Name=Gchil3677.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=749bp
MVAANRTGLWGFIILLAALAFLRSLAPEHTERAVLGLMKTTSTPRKDVDE
EMRKLKDMKDELKRERIALEKLKDELEENNDQEEEAQQAEEKSNTSDDLE
VIDSSTETETVSNDEIEEKREEHVEESANIADGSSTEQTYRENENADGEG
KQETEDEEAYNSDHDVEPVQLADDECPVVVVPEYSKSGLGTQIEHVWTSL
SVTLAVRNACVVLPPVVTDIGEEDVEIVPFHEVFDLDELGRTGLRILPLS
ICNAPGVSHVFDDNGAESAIVKNFVSYVERSHPSLAERNALVHENTQAHR
FPPIEETEGDVNRVATYIASKRGKGQGRECIGFGRMRSAIAFNGDVVEHF
QSAKGINDFVSSRYPRMNETLFVKLRWNKAHCDEKRNEDGTVCILSGEIL
PTEDYVNSIAFAASTVGASKIYISAPPYVPPEVSDFISSKLMPADPVVLD
VGSDFFTAGVVEREMAVRSRAFVPDGGAWGESVQEARRMHSPHLFKEGWN
SVVMVEEWRNAGSPTELPIIMASYNHENNTEWERPDPAVDDQSSPSKIAP
EGDQPQSDPQSTENSEKEEGSPDSGNMDAVTLQPMPENVNEDGKSDPDTA
NAVLAQPEAERETNEANVGTEMEPGLEVENGMPEKDEQDIAPKPADITQE
PVPGTVPGGLSAEDGEQRPEEYEPPQAYMPNTETDHHLFPDGQIPAREVI
QEPGAAAEEEGEAADDTNQEPSVRAVQIRSGTGISDLPRQRSKSEQKT*
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mRNA from alignment at tig00025222_pilon:570766..573012-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3677.t1 ID=Gchil3677.t1|Name=Gchil3677.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2247bp|location=Sequence derived from alignment at tig00025222_pilon:570766..573012- (Gracilaria chilensis NLEC103_M9 male)
ATGGTGGCCGCCAATCGCACTGGCTTGTGGGGGTTCATCATCTTGTTGGC
TGCTCTTGCGTTCCTTCGATCCTTGGCACCTGAGCACACAGAGCGAGCTG
TACTTGGTTTGATGAAAACGACAAGCACTCCACGTAAAGATGTAGACGAG
GAAATGAGGAAATTGAAGGATATGAAGGACGAACTAAAGCGAGAAAGAAT
CGCCTTGGAGAAATTGAAAGACGAACTTGAAGAGAATAATGACCAAGAAG
AAGAGGCCCAGCAAGCAGAAGAGAAATCCAATACGAGTGATGATCTTGAA
GTCATCGATTCTTCTACAGAAACAGAAACGGTTTCAAACGATGAAATCGA
GGAGAAACGAGAGGAACACGTTGAAGAAAGCGCTAACATTGCGGATGGTA
GCAGTACAGAACAAACATATCGAGAGAACGAAAACGCTGACGGTGAAGGG
AAACAGGAGACCGAGGACGAGGAAGCGTACAATTCAGATCACGATGTCGA
ACCAGTACAGCTTGCAGATGATGAATGCCCAGTCGTTGTGGTCCCAGAAT
ACTCCAAGTCTGGCCTCGGGACTCAAATTGAACACGTCTGGACCTCTTTA
TCAGTAACTCTTGCAGTTCGCAACGCTTGTGTTGTACTGCCTCCAGTCGT
AACAGATATTGGGGAGGAAGATGTGGAGATCGTACCTTTCCATGAGGTTT
TCGATTTGGACGAACTGGGCCGCACGGGTTTGCGAATTCTTCCCCTGTCT
ATATGCAATGCTCCTGGAGTTTCTCACGTATTCGACGACAATGGCGCGGA
AAGTGCAATTGTCAAGAACTTCGTCTCTTACGTCGAAAGAAGCCATCCAT
CGCTTGCAGAACGAAATGCCTTAGTACATGAGAACACCCAAGCACATCGT
TTCCCCCCAATCGAGGAAACGGAGGGCGACGTGAACAGAGTGGCAACATA
TATCGCATCAAAGAGAGGAAAGGGACAAGGACGCGAGTGCATTGGATTCG
GAAGAATGCGCTCTGCAATTGCATTCAACGGAGACGTTGTGGAACACTTT
CAGTCCGCGAAGGGCATCAACGACTTCGTTTCTTCCAGGTATCCAAGAAT
GAATGAAACTCTGTTCGTCAAACTACGTTGGAATAAGGCGCACTGCGACG
AAAAGCGAAACGAAGATGGAACAGTGTGTATACTTTCAGGGGAAATTCTT
CCGACTGAGGACTACGTGAATAGTATTGCTTTCGCCGCCTCGACTGTTGG
AGCATCAAAAATCTACATATCTGCGCCTCCATATGTACCACCGGAGGTCA
GTGACTTCATATCTTCTAAGCTCATGCCTGCGGATCCTGTTGTGCTTGAT
GTGGGGTCAGACTTCTTCACTGCCGGTGTAGTAGAGCGGGAAATGGCTGT
GAGATCTAGAGCGTTTGTTCCAGATGGTGGAGCTTGGGGCGAATCAGTGC
AAGAAGCCCGAAGAATGCATTCCCCGCATCTCTTTAAAGAAGGATGGAAT
TCTGTAGTCATGGTGGAGGAGTGGAGGAATGCAGGCTCGCCGACGGAATT
GCCTATCATCATGGCGTCATATAATCACGAAAACAACACCGAGTGGGAAA
GGCCAGATCCAGCGGTTGATGACCAGAGTTCTCCCTCTAAAATAGCTCCA
GAAGGTGATCAACCACAATCTGATCCACAAAGCACTGAGAATTCCGAAAA
AGAAGAAGGCTCGCCAGACTCCGGAAATATGGACGCTGTGACCTTGCAAC
CCATGCCTGAGAACGTCAACGAAGACGGCAAGTCAGACCCAGACACCGCC
AATGCTGTCCTCGCACAGCCCGAAGCAGAACGCGAGACGAATGAGGCCAA
CGTTGGCACCGAAATGGAACCTGGGCTTGAGGTCGAAAACGGTATGCCTG
AAAAAGACGAACAGGATATCGCCCCTAAACCCGCTGACATTACACAAGAA
CCAGTACCTGGCACCGTGCCTGGAGGGTTGTCGGCTGAGGACGGAGAGCA
ACGTCCAGAGGAGTACGAGCCCCCCCAAGCTTACATGCCAAACACGGAGA
CCGACCATCACCTTTTCCCGGACGGACAGATCCCCGCAAGAGAAGTTATC
CAAGAACCAGGAGCCGCTGCAGAAGAGGAAGGCGAGGCGGCTGATGATAC
GAACCAAGAGCCCAGCGTACGCGCAGTGCAAATAAGAAGCGGTACTGGTA
TAAGTGACCTACCACGTCAAAGAAGCAAAAGTGAACAAAAGACATGA
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Coding sequence (CDS) from alignment at tig00025222_pilon:570766..573012-

>Gchil3677.t1 ID=Gchil3677.t1|Name=Gchil3677.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2247bp|location=Sequence derived from alignment at tig00025222_pilon:570766..573012- (Gracilaria chilensis NLEC103_M9 male)
ATGGTGGCCGCCAATCGCACTGGCTTGTGGGGGTTCATCATCTTGTTGGC
TGCTCTTGCGTTCCTTCGATCCTTGGCACCTGAGCACACAGAGCGAGCTG
TACTTGGTTTGATGAAAACGACAAGCACTCCACGTAAAGATGTAGACGAG
GAAATGAGGAAATTGAAGGATATGAAGGACGAACTAAAGCGAGAAAGAAT
CGCCTTGGAGAAATTGAAAGACGAACTTGAAGAGAATAATGACCAAGAAG
AAGAGGCCCAGCAAGCAGAAGAGAAATCCAATACGAGTGATGATCTTGAA
GTCATCGATTCTTCTACAGAAACAGAAACGGTTTCAAACGATGAAATCGA
GGAGAAACGAGAGGAACACGTTGAAGAAAGCGCTAACATTGCGGATGGTA
GCAGTACAGAACAAACATATCGAGAGAACGAAAACGCTGACGGTGAAGGG
AAACAGGAGACCGAGGACGAGGAAGCGTACAATTCAGATCACGATGTCGA
ACCAGTACAGCTTGCAGATGATGAATGCCCAGTCGTTGTGGTCCCAGAAT
ACTCCAAGTCTGGCCTCGGGACTCAAATTGAACACGTCTGGACCTCTTTA
TCAGTAACTCTTGCAGTTCGCAACGCTTGTGTTGTACTGCCTCCAGTCGT
AACAGATATTGGGGAGGAAGATGTGGAGATCGTACCTTTCCATGAGGTTT
TCGATTTGGACGAACTGGGCCGCACGGGTTTGCGAATTCTTCCCCTGTCT
ATATGCAATGCTCCTGGAGTTTCTCACGTATTCGACGACAATGGCGCGGA
AAGTGCAATTGTCAAGAACTTCGTCTCTTACGTCGAAAGAAGCCATCCAT
CGCTTGCAGAACGAAATGCCTTAGTACATGAGAACACCCAAGCACATCGT
TTCCCCCCAATCGAGGAAACGGAGGGCGACGTGAACAGAGTGGCAACATA
TATCGCATCAAAGAGAGGAAAGGGACAAGGACGCGAGTGCATTGGATTCG
GAAGAATGCGCTCTGCAATTGCATTCAACGGAGACGTTGTGGAACACTTT
CAGTCCGCGAAGGGCATCAACGACTTCGTTTCTTCCAGGTATCCAAGAAT
GAATGAAACTCTGTTCGTCAAACTACGTTGGAATAAGGCGCACTGCGACG
AAAAGCGAAACGAAGATGGAACAGTGTGTATACTTTCAGGGGAAATTCTT
CCGACTGAGGACTACGTGAATAGTATTGCTTTCGCCGCCTCGACTGTTGG
AGCATCAAAAATCTACATATCTGCGCCTCCATATGTACCACCGGAGGTCA
GTGACTTCATATCTTCTAAGCTCATGCCTGCGGATCCTGTTGTGCTTGAT
GTGGGGTCAGACTTCTTCACTGCCGGTGTAGTAGAGCGGGAAATGGCTGT
GAGATCTAGAGCGTTTGTTCCAGATGGTGGAGCTTGGGGCGAATCAGTGC
AAGAAGCCCGAAGAATGCATTCCCCGCATCTCTTTAAAGAAGGATGGAAT
TCTGTAGTCATGGTGGAGGAGTGGAGGAATGCAGGCTCGCCGACGGAATT
GCCTATCATCATGGCGTCATATAATCACGAAAACAACACCGAGTGGGAAA
GGCCAGATCCAGCGGTTGATGACCAGAGTTCTCCCTCTAAAATAGCTCCA
GAAGGTGATCAACCACAATCTGATCCACAAAGCACTGAGAATTCCGAAAA
AGAAGAAGGCTCGCCAGACTCCGGAAATATGGACGCTGTGACCTTGCAAC
CCATGCCTGAGAACGTCAACGAAGACGGCAAGTCAGACCCAGACACCGCC
AATGCTGTCCTCGCACAGCCCGAAGCAGAACGCGAGACGAATGAGGCCAA
CGTTGGCACCGAAATGGAACCTGGGCTTGAGGTCGAAAACGGTATGCCTG
AAAAAGACGAACAGGATATCGCCCCTAAACCCGCTGACATTACACAAGAA
CCAGTACCTGGCACCGTGCCTGGAGGGTTGTCGGCTGAGGACGGAGAGCA
ACGTCCAGAGGAGTACGAGCCCCCCCAAGCTTACATGCCAAACACGGAGA
CCGACCATCACCTTTTCCCGGACGGACAGATCCCCGCAAGAGAAGTTATC
CAAGAACCAGGAGCCGCTGCAGAAGAGGAAGGCGAGGCGGCTGATGATAC
GAACCAAGAGCCCAGCGTACGCGCAGTGCAAATAAGAAGCGGTACTGGTA
TAAGTGACCTACCACGTCAAAGAAGCAAAAGTGAACAAAAGACATGA
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