Gchil3645.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3645.t1
Unique NameGchil3645.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length308
Homology
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BLAST of Gchil3645.t1 vs. uniprot
Match: A0A2V3IYN2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYN2_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 1.010e-43
Identity = 95/235 (40.43%), Postives = 127/235 (54.04%), Query Frame = 0 
Query:   30 AHAAFSAAHLYWPFLTTAVAEASSEGCARALGKDVQEIEQQGYERGMAALAPQFWFYDGVRCSKWGGVADARVLVASGGGEPDWADGVLRRAARDAQDTFGGGSVAWAEARA-GETAATVTCGARVVSRILFVRGRR--DGTVRVGANEVTARDGALVVVVEESDGRVCAFNGWTEAPNKRLSVDVVAMDAGGGSGDXXXXXXXXXXXXXXVVALGALLYGATWWAARAARRKEA 261
            A AAFSAAHL+W FLT ++   +  GC  A GKDVQE+ +  Y+  +  L   + + DGVRC KW   ADAR L  S  G  DW    L      AQ +FG  +VAWA A + G +   + CG+R +SR++FVR      G++     E+     AL V VEE DGR+C F+GWT+APNKR+S D +   +  G                 V+AL  ++YGAT    R  RR+EA
Sbjct:   21 AQAAFSAAHLHWAFLTQSL-PGNDGGCGAAFGKDVQEVGESAYDAQVVVLEASYLYNDGVRCKKWARYADARWLTVSSKG--DWEGDALMNVGTQAQKSFGRAAVAWATAHSTGGSENELICGSRSISRLIFVRADSGDSGSLSFDGREIRIESDALYVFVEEGDGRLCGFSGWTDAPNKRVSGDEMVAPSLPGGKKRGVRVGALVGGLIGVLALAGIMYGATMALVRRERRREA 252
The following BLAST results are available for this feature:
BLAST of Gchil3645.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYN2_9FLOR1.010e-4340.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..253
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 254..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availableTMHMMTMhelixcoord: 231..253
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:388508..389431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3645.t1Gchil3645.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025222_pilon 388508..389431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3645.t1 ID=Gchil3645.t1|Name=Gchil3645.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=308bp
MRSSAAAELEKMQRVFLLLAVGIALMWAQAHAAFSAAHLYWPFLTTAVAE
ASSEGCARALGKDVQEIEQQGYERGMAALAPQFWFYDGVRCSKWGGVADA
RVLVASGGGEPDWADGVLRRAARDAQDTFGGGSVAWAEARAGETAATVTC
GARVVSRILFVRGRRDGTVRVGANEVTARDGALVVVVEESDGRVCAFNGW
TEAPNKRLSVDVVAMDAGGGSGDGGVDGGRVAGGVVGVVALGALLYGATW
WAARAARRKEALVEKQGAGKQYKKDDEDEAEADEDGVSDDSALEEGVLGS
EQRGRAE*
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