Gchil3634.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3634.t1
Unique NameGchil3634.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length218
Homology
BLAST of Gchil3634.t1 vs. uniprot
Match: R7QC29_CHOCR (Ribosomal protein n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QC29_CHOCR)

HSP 1 Score: 397 bits (1021), Expect = 1.720e-139
Identity = 207/215 (96.28%), Postives = 212/215 (98.60%), Query Frame = 0
Query:    3 SKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            SKLPAATVRDAV EILAEA EKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLL+ SDSME+KVSEI+STIKFQLKKVLCMAAAVGHVNMPE++VTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF
Sbjct:    2 SKLPAATVRDAVEEILAEATEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLTQSDSMEDKVSEIQSTIKFQLKKVLCMAAAVGHVNMPEEQVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 216          
BLAST of Gchil3634.t1 vs. uniprot
Match: A0A1X6P3A5_PORUM (Ribosomal protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3A5_PORUM)

HSP 1 Score: 328 bits (841), Expect = 4.750e-112
Identity = 163/217 (75.12%), Postives = 195/217 (89.86%), Query Frame = 0
Query:    1 MSSKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            M+SKLP AT+R+AV E+L  A +KKRNF ETIELQIGLK  D KKDKRFAG++KLP VPRPNMKVAILG+AVH++EA+K+G+ A+  + LKKFNKQKKP+KKFAKKYDAFLASDSIIKTIPRILGPGLNKAG+FPSLL+ +DSME+KV+E+RST+KFQLKKVLC+A AVGHVN+ E E+  NI+L+VNFLVSLLKK+WQNVKSLH+KSTMG  KR++
Sbjct:    1 MASKLPTATIREAVEEVLKAAGDKKRNFVETIELQIGLKGIDPKKDKRFAGTVKLPAVPRPNMKVAILGDAVHMTEAQKLGLDAFDVEALKKFNKQKKPVKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGRFPSLLTHADSMEDKVTELRSTVKFQLKKVLCIAVAVGHVNLDEGEIVNNIVLSVNFLVSLLKKHWQNVKSLHIKSTMGPVKRLY 217          
BLAST of Gchil3634.t1 vs. uniprot
Match: M2XI08_GALSU (Ribosomal protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XI08_GALSU)

HSP 1 Score: 323 bits (829), Expect = 3.080e-110
Identity = 161/215 (74.88%), Postives = 192/215 (89.30%), Query Frame = 0
Query:    3 SKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            SKL  ATVR AVA+IL E+QEKKRNF ET+ELQIGLKNYDTKKDKRF+GSIKLP +P+  ++VAILG+A+HV +A+++GI AY  + L+KFNKQKKPIKKFAKKYDAFLASDS+IK +PRILGP LNKAGKFP+ +S SD+++EKV+EI++TIKFQLKKVLCM  AVG+V M ED++ ANI LA+NFLVSLLKKNWQNVKSLH+KSTMGKPKRIF
Sbjct:    2 SKLQTATVRSAVADILRESQEKKRNFVETVELQIGLKNYDTKKDKRFSGSIKLPYIPKSKLQVAILGDAIHVQQAQELGIDAYDVEALRKFNKQKKPIKKFAKKYDAFLASDSVIKQLPRILGPALNKAGKFPTPISHSDNLQEKVNEIKATIKFQLKKVLCMGVAVGNVQMTEDQLVANITLAINFLVSLLKKNWQNVKSLHIKSTMGKPKRIF 216          
BLAST of Gchil3634.t1 vs. uniprot
Match: A0A7S0G779_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G779_9RHOD)

HSP 1 Score: 318 bits (814), Expect = 6.140e-108
Identity = 160/217 (73.73%), Postives = 190/217 (87.56%), Query Frame = 0
Query:    1 MSSKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            M SKLP ATV  AVAEILAEA++KKRNF ETIELQIGLKNYDTKKDKRF+G+IKLP+VPRP +KVA+LG+A HV+EA+ + +  Y  D LKKFNK KKPIK FAKKYDAFLAS+SII+ IPRILGPGL KAGKFP+LL+ SDSM++K+ +++STIKFQLKKVLC+A AVG+V   E+EV AN+ LAVNFLVSLLKK+WQNVKSLH+KSTMG P+R+F
Sbjct:    1 MGSKLPHATVSAAVAEILAEAKDKKRNFVETIELQIGLKNYDTKKDKRFSGTIKLPHVPRPRLKVAVLGDAQHVTEAQALNVDVYDVDALKKFNKAKKPIKNFAKKYDAFLASESIIRIIPRILGPGLLKAGKFPALLTHSDSMDDKIGDLKSTIKFQLKKVLCLAVAVGNVEQSEEEVVANVTLAVNFLVSLLKKHWQNVKSLHIKSTMGAPRRLF 217          
BLAST of Gchil3634.t1 vs. uniprot
Match: A0A7S1XI30_9RHOD (Ribosomal protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XI30_9RHOD)

HSP 1 Score: 315 bits (806), Expect = 1.010e-106
Identity = 159/217 (73.27%), Postives = 183/217 (84.33%), Query Frame = 0
Query:    1 MSSKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            MS+KLP   VR A+AE+L E++EKKRNF ETIELQIGLKNYDTKKDKRFAG++KLP+ PRP MK+AIL +A H S AE   +P Y  D LKKFNKQKKPIKKFAK YDAFLAS+SIIK IPRILGPGLNKAGKFPSLL+  + M  KV E++ST+KFQLKKVLC++ AVG+V M EDE   N ILAVNFLVSLLKK+WQNVKSLH+KSTMGKPKR++
Sbjct:    1 MSTKLPTTVVRQAMAEVLQESKEKKRNFVETIELQIGLKNYDTKKDKRFAGTVKLPHNPRPRMKIAILADAAHKSTAEGFNLPVYDVDALKKFNKQKKPIKKFAKSYDAFLASESIIKMIPRILGPGLNKAGKFPSLLAGGEDMLGKVEELQSTVKFQLKKVLCLSTAVGNVEMSEDECVQNTILAVNFLVSLLKKHWQNVKSLHIKSTMGKPKRLY 217          
BLAST of Gchil3634.t1 vs. uniprot
Match: A0A5J4YSV5_PORPP (Ribosomal protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSV5_PORPP)

HSP 1 Score: 303 bits (777), Expect = 2.540e-102
Identity = 156/215 (72.56%), Postives = 183/215 (85.12%), Query Frame = 0
Query:    3 SKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            SKLP ATVR AV EI+ EA +KKRNF ETIELQIGLKNYDTKKDKRFAG+++LP  PRP MKVAIL +A   ++AE + +PA+  + LKKFNKQKKPIKKFA++Y AFLAS+S+IKTIPRILGPGLNKAGKFPSLL     +   V E+++TIKFQLKKVLCMA AVG+V M +DEVTAN++LAVNFLVSLLKK+WQNVKSLH+KSTMGK KRI+
Sbjct:    2 SKLPPATVRTAVGEIIQEATDKKRNFTETIELQIGLKNYDTKKDKRFAGTVRLPYNPRPKMKVAILADAATKTQAEALNVPAFDVEALKKFNKQKKPIKKFAQQYAAFLASESLIKTIPRILGPGLNKAGKFPSLLPPGGEITGAVEEVQATIKFQLKKVLCMATAVGNVEMGQDEVTANVMLAVNFLVSLLKKHWQNVKSLHLKSTMGKAKRIY 216          
BLAST of Gchil3634.t1 vs. uniprot
Match: A0A7J7IL65_9RHOD (Ribosomal protein n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IL65_9RHOD)

HSP 1 Score: 297 bits (760), Expect = 1.050e-99
Identity = 143/218 (65.60%), Postives = 189/218 (86.70%), Query Frame = 0
Query:    1 MSSKLPAATVRDAVAEILAEAQEK-KRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            MSSKLP +  R AV E+L E++E+ KRNF ET+ELQ+GLKNYD +KDKRF+GS++LP +PRP MKVAILG+A H S+A  +G+  Y  + LK+FNKQKKPIKKFAK YDAFLAS+S+I+ IPR+LGPGLNKAGKFP+L+++++++E KV+E+++TIKFQLKKVLC+A AVG+V M EDE+ ANI LA+NFL+SLLKK WQN+KS+HVK+TMG+P+R++
Sbjct:    1 MSSKLPVSVTRAAVQEMLRESREEHKRNFVETVELQVGLKNYDPQKDKRFSGSVRLPYIPRPKMKVAILGDAAHNSQAVALGLDFYDLEKLKQFNKQKKPIKKFAKSYDAFLASESVIRQIPRVLGPGLNKAGKFPTLIASNETVEAKVNEVKATIKFQLKKVLCLAVAVGNVGMTEDELVANITLAINFLISLLKKQWQNIKSIHVKTTMGRPRRLY 218          
BLAST of Gchil3634.t1 vs. uniprot
Match: A0A4P9YK02_ROZAC (Ribosomal protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YK02_ROZAC)

HSP 1 Score: 294 bits (752), Expect = 1.680e-98
Identity = 143/217 (65.90%), Postives = 181/217 (83.41%), Query Frame = 0
Query:    1 MSSKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            MSSKL  A VR  +AE+L  +QE KRNF ET+ELQIGLKNYD ++DKRF+G++KLP +P+P M + ILG+A H  EA+KI +   S DDLKKFNK KK IKK AKKYDAFLAS+++IK IPR+LGPGLNKAGKFP+ +S SD++EE++ ++++TIKFQLKKVLC+  AVGHV M EDE+ +N+I++VNFLVSLLKKNWQNVKSL +KS+MGKP RI+
Sbjct:    1 MSSKLSGAIVRQNIAELLKGSQENKRNFVETVELQIGLKNYDPQRDKRFSGTVKLPYIPKPRMNICILGDAHHCDEAKKIQVDCLSVDDLKKFNKNKKEIKKLAKKYDAFLASEALIKLIPRLLGPGLNKAGKFPTPISHSDNLEERIKDVKATIKFQLKKVLCLGVAVGHVEMTEDEIASNVIMSVNFLVSLLKKNWQNVKSLFIKSSMGKPFRIY 217          
BLAST of Gchil3634.t1 vs. uniprot
Match: A0A4P9Z0U1_9FUNG (Ribosomal protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z0U1_9FUNG)

HSP 1 Score: 292 bits (748), Expect = 6.580e-98
Identity = 141/215 (65.58%), Postives = 181/215 (84.19%), Query Frame = 0
Query:    3 SKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            SK+  A VR+ V ++LAE+QEK R F ET+ELQIGLKNYD ++DKRF+G++KLPN+PRPNM V +LG+A H  EA+K+ +P  S DDLKK NK KK IKK AKKYDAF+ASD++IK IPR+LGPGL+KAGKFP+ +S SD++  K+ EIR+TIKFQLKKVLC+  AVGHVNM  +++  NI+LAVNFL+SLLKK+WQNV+SL++KSTMGKPKR++
Sbjct:    2 SKIQVAAVRETVKQLLAESQEKPRKFVETVELQIGLKNYDPQRDKRFSGTVKLPNIPRPNMSVCVLGDAHHCDEAQKLNLPFMSADDLKKLNKNKKLIKKLAKKYDAFVASDALIKQIPRLLGPGLHKAGKFPTPVSHSDNLVAKIDEIRATIKFQLKKVLCLGVAVGHVNMDSEDLLGNIMLAVNFLISLLKKHWQNVRSLYIKSTMGKPKRLY 216          
BLAST of Gchil3634.t1 vs. uniprot
Match: S8D2L8_9LAMI (Ribosomal protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D2L8_9LAMI)

HSP 1 Score: 290 bits (743), Expect = 3.660e-97
Identity = 143/215 (66.51%), Postives = 183/215 (85.12%), Query Frame = 0
Query:    3 SKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFAGSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPIKKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSEIRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQNVKSLHVKSTMGKPKRIF 217
            SKL A  VRD++AEILA+++E KRNF ETIELQIGLKNYDT+KDKRF+GS+KLP++PRP MKV +LG+A HV EAEKIG+ +   + LKK NK KK +KK AKKY AFLAS+++IK IPR+LGPGLNKAGKFP+L+S  +S+E KV++ ++T+KFQLKKVLCM  AVG+V+M E ++  N+ ++VNFLVSLLKKNWQNVK L++KSTMGKP+RI+
Sbjct:    1 SKLQAKFVRDSIAEILADSKENKRNFTETIELQIGLKNYDTQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNDTKATVKFQLKKVLCMGIAVGNVDMEEKQIFQNVQMSVNFLVSLLKKNWQNVKCLYLKSTMGKPRRIY 215          
The following BLAST results are available for this feature:
BLAST of Gchil3634.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QC29_CHOCR1.720e-13996.28Ribosomal protein n=2 Tax=Rhodymeniophycidae TaxID... [more]
A0A1X6P3A5_PORUM4.750e-11275.12Ribosomal protein n=1 Tax=Porphyra umbilicalis Tax... [more]
M2XI08_GALSU3.080e-11074.88Ribosomal protein n=1 Tax=Galdieria sulphuraria Ta... [more]
A0A7S0G779_9RHOD6.140e-10873.73Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1XI30_9RHOD1.010e-10673.27Ribosomal protein n=1 Tax=Erythrolobus australicus... [more]
A0A5J4YSV5_PORPP2.540e-10272.56Ribosomal protein n=1 Tax=Porphyridium purpureum T... [more]
A0A7J7IL65_9RHOD1.050e-9965.60Ribosomal protein n=2 Tax=Cyanidiaceae TaxID=26531... [more]
A0A4P9YK02_ROZAC1.680e-9865.90Ribosomal protein n=1 Tax=Rozella allomycis (strai... [more]
A0A4P9Z0U1_9FUNG6.580e-9865.58Ribosomal protein n=1 Tax=Syncephalis pseudoplumig... [more]
S8D2L8_9LAMI3.660e-9766.51Ribosomal protein (Fragment) n=1 Tax=Genlisea aure... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableGENE3D3.30.190.20coord: 21..212
e-value: 7.2E-56
score: 190.8
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 2..216
NoneNo IPR availablePANTHERPTHR23105:SF10160S RIBOSOMAL PROTEIN L10Acoord: 2..216
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 24..211
e-value: 3.4E-42
score: 144.5
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 10..216
e-value: 7.88982E-63
score: 192.399
IPR002143Ribosomal protein L1PIRSFPIRSF002155RPL1p_RPL1a_RPL10e_RPL1ocoord: 1..217
e-value: 1.1E-47
score: 160.2
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 66..155
e-value: 7.2E-56
score: 190.8
IPR023673Ribosomal protein L1, conserved sitePROSITEPS01199RIBOSOMAL_L1coord: 117..136
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 6..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:362326..362979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3634.t1Gchil3634.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025222_pilon 362326..362979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3634.t1 ID=Gchil3634.t1|Name=Gchil3634.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=218bp
MSSKLPAATVRDAVAEILAEAQEKKRNFQETIELQIGLKNYDTKKDKRFA
GSIKLPNVPRPNMKVAILGNAVHVSEAEKIGIPAYSTDDLKKFNKQKKPI
KKFAKKYDAFLASDSIIKTIPRILGPGLNKAGKFPSLLSASDSMEEKVSE
IRSTIKFQLKKVLCMAAAVGHVNMPEDEVTANIILAVNFLVSLLKKNWQN
VKSLHVKSTMGKPKRIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028364Ribosomal_L1/biogenesis
IPR002143Ribosomal_L1
IPR016095Ribosomal_L1_3-a/b-sand
IPR023673Ribosomal_L1_CS
IPR023674Ribosomal_L1-like