Gchil363.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil363.t1
Unique NameGchil363.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length567
Homology
BLAST of Gchil363.t1 vs. uniprot
Match: A0A2V3IRQ5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRQ5_9FLOR)

HSP 1 Score: 729 bits (1881), Expect = 6.550e-259
Identity = 392/568 (69.01%), Postives = 461/568 (81.16%), Query Frame = 0
Query:    1 MVRLSVFVCVALLAALVSSTELKFDEGDSVITVLASYGDASATVSVLYKGG--EADVXVSSSSLFSAGSPSVAEAAGGYTNYTIPMSFNGGVGSTTYTVTVGDQSVTGTVIVAGFVILADGEVVSGDDGEGITVGQSGSTNYEVKAVGVDGGAVDISGTSITGKELSGPYMKEIDTSGTSISSSTFTLRIASMRVGTGNFIINFDAPAISLGGESFETVLNVKQSTSPEPACVAYGGAVTTSGGMVKVPMFNLLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFKISAAGTASITCDGEPAVVMGDDIVASGDDSGAPLATTLVAKLADSESQSKFSAVISVEKSSPDALLAVDAQKILDRFCSSIGSSSCVIEAVRKGSALLDCAGYIDGEDAVKAESKLVSEFDSCEFQTATGYACDELTLGDMSVNKAVVGAGTAVAASGLATWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSESDYSSSGPLGVPDPSDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSGVSRGAGTDDASSTYSV 566
            M+R +VFV +  L   V S +LKF EGD+  TVLAS+G+AS T+S+LYKG   +ADV VSSSSLFS G+ S AE   GYTN++IP++F+ GVGSTTYTV+VG ++VTG+++ AGFVILADG+VVSGDDGEG++VGQ G+T YEVKAVG DG  VDISGT+ITG+ELSGPYMKEID S TSISS  FTL IA  RVGTGNFII+FD PAIS+ GESFETVLNVKQ+T+P P CVAYGG++TTSGGMV + M+NLL+PP+S+PV K+T+++  T+VD+D G+SSL+LPDQ VAFK SAAGTASI+CDG  AVVMG DI  SGD S   LAT+LV    +S+S S  SAVISV  S P  L     +K+L +FCS++GSSSC I  +RKGSAL D    +D +DA  A+  LV  F  C+FQ ATGY CD+L LG+ S+ KAVVG     A+ GLATWTIVLIAGVGAFALILVI+LGL++VYRRSAEQSESDYSSSGPLGVPDPSDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSG+SR A TDDASSTYSV
Sbjct:    1 MIRCTVFVSLVALLVAVVSADLKFSEGDASKTVLASFGEASTTISLLYKGSASDADVSVSSSSLFSVGAISSAEGMSGYTNFSIPLTFDKGVGSTTYTVSVGSETVTGSLVAAGFVILADGKVVSGDDGEGVSVGQKGTTMYEVKAVGTDGRPVDISGTTITGRELSGPYMKEIDMSRTSISSDKFTLTIAPYRVGTGNFIISFDTPAISMSGESFETVLNVKQATTPTPPCVAYGGSITTSGGMVMIRMYNLLSPPRSTPVSKITLSVAGTSVDYDAGSSSLSLPDQTVAFKTSAAGTASISCDGADAVVMGGDIELSGDSSAPALATSLVTDAPESDSMSTLSAVISVVDSDPAVLTRAAGEKLLAQFCSTVGSSSCAIVGIRKGSALCDMRALVDPDDAEAADEALVESFAECKFQQATGYECDKLKLGERSLTKAVVGTDVGAASGGLATWTIVLIAGVGAFALILVIVLGLYSVYRRSAEQSESDYSSSGPLGVPDPSDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSGLSRSAATDDASSTYSV 568          
BLAST of Gchil363.t1 vs. uniprot
Match: A0A1X6PDR0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDR0_PORUM)

HSP 1 Score: 246 bits (628), Expect = 1.230e-69
Identity = 210/601 (34.94%), Postives = 301/601 (50.08%), Query Frame = 0
Query:   33 VLASYGDASATVSVLYKGGEADVXVSSSSL----------FSAGSPSVAEAAGGY--TNYTIPMSFNGGVGSTTYTVTVGDQSVT----GTVIVAGFVILADGEVVSGDDGEGITVG------QSGSTNYEVKAVGVDGGAVDISGTSITGKELSGP-YMKEIDTSGT-------------------SISSSTFTLRIASMRVGTGNFIINFDAPAISLGGESFETVLNVKQSTSPEPACVAYGGAVT--TSGGMVKVPMFNLLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFKISAAGT-----ASITCDGEP----AVVMGDDIVAS-GDDSGAPLATTLVAKLADSESQSKFSAVISVEKSSPDALLAVDAQKILDRFCSSIGSSS--CVIEAVRKGSALLDCAGYIDGEDAVKAESKLVSEF---DSCEFQTATGYACDELTLGDMSVNKAVVGAGTAVAA-SGLA--------TWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSESDYSSSGPLGVPDPSDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSGVSRGAGTDDASSTYS 565
            VL  YG A+ T+S  ++       + S S+           S    +V    GG   TN T  + F+G VG T Y V V   + T    G   V GFV++ D ++VSG++ +G+ +G      +   T   +K         D+    I+ KE  G  ++KE++   T                   S   + F ++ +  R G G F I+F  P++ L GE FETVL VK   S  P CVA G  V   +SGG+V V MFNLL PP+ S V KV ++    + D + G S+L  PDQ + F++S   +     A+I C  E     A  +G  +V     ++G P    L  +    + + + + +I  ++  P         K L  F   +G  +    +E VR+GSA+     Y D ++   A+ + +      +SC+ Q A    CD++   +  +   V   G+ V+  SG A        TW+I LIA +GA  ++L+I L LWAVYRRSAEQ+ESDYS+SGPLGVPDP DLLY +S+VRD+YGR +    GP+   A  RAREA+LREE PRPPS+S  S  A TDDASSTYS
Sbjct:   75 VLLMYGSATDTISFSFRPSTKTEEIESVSIKGYKRAIITSVSEPEQTVVGNVGGVPVTNMTFTIGFDGTVGDTGYEVEVVTDADTYTMEGAYEVGGFVLVLDEKIVSGEEKDGLQLGDVVALVKKSLTECSMKWKTFGSVTPDVGAIQISFKEQEGSTFLKEVEYEDTCEVDGYVDNKLAPGCGVGFSPGGNAFAIKTSPYRCGYGQFFIHFTWPSVELNGEVFETVLIVKFDKSSPPPCVALGDTVEVDSSGGVVAVDMFNLLNPPQPSDVEKVILSYDGKSFDSNNGKSTLEQPDQKMVFEVSGGTSGEKYDATIECAFEDRTIEATYLGGKVVIDVTGEAGLPERKDLPER----DGKIRVAVLIEFDRYDPTNYTVAVHNKCLAGFFEMLGGDADDYGLETVRQGSAIPVVLMYADDQEDYDAKVETLKADLAEESCKGQQAMDEPCDKVRFLESYI---VASDGSGVSGDSGAAXXXXXXXXTWSIALIAVLGALIVMLLIALALWAVYRRSAEQTESDYSTSGPLGVPDPDDLLYNESVVRDVYGRSNG--AGPTPETAAARAREAELREEFPRPPSTSAASGRAETDDASSTYS 666          
BLAST of Gchil363.t1 vs. uniprot
Match: A0A1X6NSI7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSI7_PORUM)

HSP 1 Score: 229 bits (583), Expect = 2.120e-63
Identity = 199/594 (33.50%), Postives = 292/594 (49.16%), Query Frame = 0
Query:   33 VLASYGDASATVSVLYKGGEADVXVSSSSLFSA------GSPSVAEAAGG------YTNYTIPMSFNGGVGSTTYTVTV----GDQSVTGTVIVAGFVILADGEVVSGDDGE-----------------GITVGQSGST------NYEVKAV-GVDGGAVDI-SGTSITGKELSGPYMKEIDTSGTSISSSTFTLRIASMRVGTGNFIINFDAPAISLGGESFETVLNVKQSTSPEPACVAYGG--AVTTSGGMVKVPMFNLLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFKISAAGTASITCDGEPAVVMGDDIVASGDDSGAPLATTLVAK--------LADSESQSKFSAVISVEKSSPDALLAVDAQKILDRFCSSIGSSSCVI--EAVRKGSALLDCAGYIDGEDAVKAESKLVS-EFDSCEFQTATGYAC------DELTLGDMSVNKAVVGAGTAVAASGLATWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSESDYSSSGPLGVPDPSDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSGVSRGAGTDDASSTYSV 566
            VL SYG     VS +++       V+S ++  A        P V +A  G       TN T  ++  G VG + YT+ V       ++ G V V GFV+ ++G VVSG+D                   G+     GS+        EV ++ GV+   V+  S  S TG +  G  +     +G +    TF L+++  RVGTG F +    P++ L GE F T L V+  TS    CVA GG   V   GGMV V MFNL++PP  S V KV ++ G  + D D+  S L  PDQ + F++   G A  + D +   V G   +      G  L  ++  K        L   ++ ++ +  + +++  P+        K +       G S+  +   +V +GSA+ +   Y D + A + E  + +   D CE   A    C      D   L +     + V  GT  A + LA+W I L+A +GA  +++++ L LW VYRRS++ S S+YSSSGPLGVPDP DLLY +S+VRD+YGR +    GP+A    +RA+EA+LREE PRPPS+S  S G  TDDASSTY+V
Sbjct:   57 VLLSYGMEEQAVSCIFRPSRRTETVTSVTVNVAKKHIITNRPDVVQADAGSFAGAPLTNMTFTLAMEGQVGMSAYTLVVVTDVDTYTLDGMVEVGGFVLKSNGRVVSGEDNALQLGNVFEVAAKPMIELGVMTKTFGSSPSWEDVQIEVSSMDGVNYKQVEYDSSCSSTGYD--GGRLAAGCGAGFAADGKTFGLKLSPYRVGTGAFKLILKWPSMELDGEYFVTELIVRMDTSKTAPCVAMGGDVKVDAGGGMVSVEMFNLVSPPAPSTVDKVVLSYGGKSYDHDQRKSMLVQPDQTIVFRVGK-GVAGESFDAKLQCVFGARSM-EAKYVGGKLRVSVTGKAELPKEQPLPAKDNMNRLAVRVELDRYEPETYTVAVHNKCVAAMVGLFGVSADEVGLRSVTRGSAISELEVYTDKDCATEKEMVMDAWGGDGCEAAKAMDEPCGTVRVLDVFCLANDGSGVSGVAPGTVAAGATLASWAIALVAVLGALVVLVLVCLALWVVYRRSSDSSASEYSSSGPLGVPDPDDLLYNESVVRDVYGRSNG--AGPTAEAVAERAKEAELREEFPRPPSTSAAS-GRDTDDASSTYTV 643          
BLAST of Gchil363.t1 vs. uniprot
Match: R7QCF0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCF0_CHOCR)

HSP 1 Score: 218 bits (555), Expect = 1.050e-62
Identity = 139/328 (42.38%), Postives = 182/328 (55.49%), Query Frame = 0
Query:  248 MFNLLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFK-ISAAGTASITCDGEPAVVM------GDDIVASGDDSGAPLATT-LVAKLADSESQSKFSAVISVEKSSPDALLAVDAQKILDRFCSSIGSSSCVIEAVRKGSALLDCAGYIDGEDAVKAESKLVSEFDSCEFQTATGYACDELTLGDMSVNKAVVGAGTAVAASGLATWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSES-DYSSSGPLGVPDPSDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSGVSRGAGTDDASSTYSV 566
            M+N+LTPP+ SPV ++ + IG T+  +   +SSL LP   V F+ +S  G A ITCDGE AVV+      GDD+      +  PLA   LV +   S+++++ ++ I V  SSPD L   +A  I+  +C         + ++ +GSALLD    ++  D  KA+  L   FD CEFQ  T YACDEL L ++    A+      VA +G+ATWTI                                  YSSSGPLGVPDPSDLLYEQSIVRD+YGRG+  DGGPS   A    R A +REE P+PPSSS +SRG  + DASSTYSV
Sbjct:    1 MYNILTPPRGSPVSEIVLKIGDTSTSFSSSSSSLKLPTSTVVFEGVSGVGPAEITCDGEAAVVVPTADDDGDDLTVVSGGASEPLAKDELVTEYPSSDTEARITSTIRVVNSSPDVLTVSEANAIITEYCRVAECQEIGVRSILEGSALLDIGALVEDADVAKAD--LRKSFDDCEFQEKTDYACDELELLEVRSTNAIA---ATVATAGIATWTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYSSSGPLGVPDPSDLLYEQSIVRDVYGRGE--DGGPSEQAAVDSERAAAMREEFPKPPSSSSLSRGNRSSDASSTYSV 321          
BLAST of Gchil363.t1 vs. uniprot
Match: A0A1X6NT43_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NT43_PORUM)

HSP 1 Score: 181 bits (460), Expect = 5.110e-47
Identity = 126/347 (36.31%), Postives = 185/347 (53.31%), Query Frame = 0
Query:  237 VTTSGGMVKVPMFNLLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFKISAAGTASITCDGEPAVVMGDDIVASGDDSGAPLATTLVAK--------LADSESQSKFSAVISVEKSSPDALLAVDAQKILDRFCSSIGSSSCVI--EAVRKGSALLDCAGYIDGEDAVKAESKLVS-EFDSCEFQTATGYAC------DELTLGDMSVNKAVVGAGTAVAASGLATWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSESDYSSSGPLGVPDPSDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSGVSRGAGTDDASSTYSV 566
            V   GGMV V MFNL++PP  S V KV ++ G  + D D+  S L  PDQ + F++   G A  + D +   V G   +      G  L  ++  K        L   ++ ++ +  + +++  P+        K +       G S+  +   +V +GSA+ +   Y D + A + E  + +   D CE   A    C      D   L +     + V  GT  A + LA+W I L+A +GA  +++++ L LW VYRRS++ S S+YSSSGPLGVPDP DLLY +S+VRD+YGR +    GP+A    +RA+EA+LREE PRPPS+S  S G  TDDASSTY+V
Sbjct:  167 VDAGGGMVSVEMFNLVSPPAPSTVDKVVLSYGGKSYDHDQRKSMLVQPDQTIVFRVGK-GVAGESFDAKLQCVFGARSM-EAKYVGGKLRVSVTGKAELPKEQPLPAKDNMNRLAVRVELDRYEPETYTVAVHNKCVAAMVGLFGVSADEVGLRSVTRGSAISELEVYTDKDCATEKEMVMDAWGGDGCEAAKAMDEPCGTVRVLDVFCLANDGSGVSGVAPGTVAAGATLASWAIALVAVLGALVVLVLVCLALWVVYRRSSDSSASEYSSSGPLGVPDPDDLLYNESVVRDVYGRSNG--AGPTAEAVAERAKEAELREEFPRPPSTSAAS-GRDTDDASSTYTV 508          
The following BLAST results are available for this feature:
BLAST of Gchil363.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IRQ5_9FLOR6.550e-25969.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PDR0_PORUM1.230e-6934.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NSI7_PORUM2.120e-6333.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QCF0_CHOCR1.050e-6242.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NT43_PORUM5.110e-4736.31Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 515..566
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 453..478
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..452
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 479..566
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 453..475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:624080..625780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil363.t1Gchil363.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 624080..625780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil363.t1 ID=Gchil363.t1|Name=Gchil363.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=567bp
MVRLSVFVCVALLAALVSSTELKFDEGDSVITVLASYGDASATVSVLYKG
GEADVSVSSSSLFSAGSPSVAEAAGGYTNYTIPMSFNGGVGSTTYTVTVG
DQSVTGTVIVAGFVILADGEVVSGDDGEGITVGQSGSTNYEVKAVGVDGG
AVDISGTSITGKELSGPYMKEIDTSGTSISSSTFTLRIASMRVGTGNFII
NFDAPAISLGGESFETVLNVKQSTSPEPACVAYGGAVTTSGGMVKVPMFN
LLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFKISAAGTASI
TCDGEPAVVMGDDIVASGDDSGAPLATTLVAKLADSESQSKFSAVISVEK
SSPDALLAVDAQKILDRFCSSIGSSSCVIEAVRKGSALLDCAGYIDGEDA
VKAESKLVSEFDSCEFQTATGYACDELTLGDMSVNKAVVGAGTAVAASGL
ATWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSESDYSSSGPLGVPDP
SDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSG
VSRGAGTDDASSTYSV*
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