Gchil363.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil363.t1
Unique NameGchil363.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length567
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:624080..625780 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil363Gchil363Gracilaria chilensis NLEC103_M9 malegenetig00000212_pilon 624080..625780 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil363.t1.stop1Gchil363.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000212_pilon 624080..624082 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil363.t1.CDS1Gchil363.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000212_pilon 624080..625780 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil363.t1.exon1Gchil363.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000212_pilon 624080..625780 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil363.t1.start1Gchil363.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000212_pilon 625778..625780 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil363.t1Gchil363.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000212_pilon 624080..625780 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil363.t1 ID=Gchil363.t1|Name=Gchil363.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=567bp
MVRLSVFVCVALLAALVSSTELKFDEGDSVITVLASYGDASATVSVLYKG
GEADVSVSSSSLFSAGSPSVAEAAGGYTNYTIPMSFNGGVGSTTYTVTVG
DQSVTGTVIVAGFVILADGEVVSGDDGEGITVGQSGSTNYEVKAVGVDGG
AVDISGTSITGKELSGPYMKEIDTSGTSISSSTFTLRIASMRVGTGNFII
NFDAPAISLGGESFETVLNVKQSTSPEPACVAYGGAVTTSGGMVKVPMFN
LLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFKISAAGTASI
TCDGEPAVVMGDDIVASGDDSGAPLATTLVAKLADSESQSKFSAVISVEK
SSPDALLAVDAQKILDRFCSSIGSSSCVIEAVRKGSALLDCAGYIDGEDA
VKAESKLVSEFDSCEFQTATGYACDELTLGDMSVNKAVVGAGTAVAASGL
ATWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSESDYSSSGPLGVPDP
SDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSG
VSRGAGTDDASSTYSV*
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spliced messenger RNA

>Gchil363.t1 ID=Gchil363.t1|Name=Gchil363.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1701bp|location=Sequence derived from alignment at tig00000212_pilon:624080..625780- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCCGTCTTTCCGTTTTCGTGTGCGTTGCCCTGTTGGCCGCACTCGT
GTCCTCCACCGAGCTTAAGTTTGACGAAGGAGACTCCGTCATTACTGTTC
TCGCCTCGTATGGTGACGCCTCGGCCACCGTCTCCGTCCTGTACAAGGGA
GGAGAAGCCGATGTATCCGTGTCCTCCTCTTCGCTCTTTTCGGCCGGCTC
CCCGAGCGTGGCCGAGGCCGCCGGCGGATATACCAACTACACTATCCCCA
TGTCCTTCAACGGCGGCGTAGGTTCCACCACCTACACCGTCACCGTGGGA
GACCAATCCGTTACCGGAACCGTTATCGTCGCCGGCTTTGTCATTCTCGC
CGACGGCGAAGTGGTGTCCGGCGATGACGGCGAGGGTATCACCGTCGGCC
AGTCGGGCTCCACCAACTACGAGGTCAAGGCCGTTGGTGTTGACGGCGGT
GCCGTTGACATTTCCGGCACTAGCATTACCGGAAAGGAACTCTCCGGTCC
GTACATGAAGGAAATCGACACCAGTGGTACTTCAATCTCGTCCTCCACCT
TCACGCTTCGCATTGCGTCCATGCGCGTGGGTACGGGCAACTTCATCATC
AACTTCGACGCGCCGGCCATCTCACTGGGCGGCGAGTCATTCGAGACCGT
GCTCAATGTGAAGCAGTCCACCTCGCCCGAGCCGGCGTGCGTGGCTTACG
GTGGCGCCGTTACCACATCCGGTGGAATGGTCAAGGTGCCTATGTTCAAT
CTGTTGACGCCGCCCAAGTCCTCGCCGGTGGGCAAGGTCACCATAACCAT
TGGCTCCACCACCGTGGACTGGGACAAGGGCGCGTCTTCGCTGACGCTGC
CTGATCAGATTGTGGCATTTAAAATCTCAGCGGCCGGAACCGCCTCCATC
ACCTGCGACGGTGAACCCGCCGTGGTGATGGGCGATGATATCGTGGCGTC
CGGCGATGATTCGGGCGCGCCGCTGGCCACGACGCTGGTGGCCAAGTTGG
CCGACTCGGAGTCGCAATCTAAGTTCTCCGCCGTGATCAGCGTTGAAAAG
TCGTCTCCGGATGCGCTACTTGCTGTGGACGCGCAGAAGATCCTCGACCG
CTTCTGTTCGAGTATCGGCTCATCGTCTTGTGTGATTGAGGCCGTGCGCA
AGGGATCTGCGCTTCTGGACTGCGCAGGCTACATTGATGGCGAGGACGCC
GTCAAGGCGGAATCGAAACTGGTGAGCGAGTTTGACTCATGCGAGTTCCA
AACGGCGACGGGGTACGCGTGCGACGAGCTGACGCTCGGTGACATGAGCG
TGAACAAGGCCGTGGTGGGGGCTGGCACAGCGGTTGCTGCCTCCGGACTG
GCCACATGGACAATTGTGCTGATTGCCGGCGTGGGCGCGTTCGCGCTGAT
CCTGGTGATCATGCTTGGTCTGTGGGCTGTGTATCGTCGCTCGGCCGAGC
AGTCGGAGAGTGACTATTCGTCTTCTGGACCGCTTGGCGTGCCGGACCCG
TCTGATCTGCTGTACGAGCAGAGCATTGTGCGTGATATCTACGGTCGTGG
CGACTTCCCTGACGGAGGCCCGTCTGCGGCGGTTGCCGAGCAGCGCGCTC
GTGAAGCTGACTTGCGGGAGGAGACCCCGCGACCGCCTTCCTCGTCGGGC
GTGTCGCGCGGCGCGGGCACCGATGACGCGTCGTCTACATACTCTGTGTA
A
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protein sequence of Gchil363.t1

>Gchil363.t1 ID=Gchil363.t1|Name=Gchil363.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=567bp
MVRLSVFVCVALLAALVSSTELKFDEGDSVITVLASYGDASATVSVLYKG
GEADVSVSSSSLFSAGSPSVAEAAGGYTNYTIPMSFNGGVGSTTYTVTVG
DQSVTGTVIVAGFVILADGEVVSGDDGEGITVGQSGSTNYEVKAVGVDGG
AVDISGTSITGKELSGPYMKEIDTSGTSISSSTFTLRIASMRVGTGNFII
NFDAPAISLGGESFETVLNVKQSTSPEPACVAYGGAVTTSGGMVKVPMFN
LLTPPKSSPVGKVTITIGSTTVDWDKGASSLTLPDQIVAFKISAAGTASI
TCDGEPAVVMGDDIVASGDDSGAPLATTLVAKLADSESQSKFSAVISVEK
SSPDALLAVDAQKILDRFCSSIGSSSCVIEAVRKGSALLDCAGYIDGEDA
VKAESKLVSEFDSCEFQTATGYACDELTLGDMSVNKAVVGAGTAVAASGL
ATWTIVLIAGVGAFALILVIMLGLWAVYRRSAEQSESDYSSSGPLGVPDP
SDLLYEQSIVRDIYGRGDFPDGGPSAAVAEQRAREADLREETPRPPSSSG
VSRGAGTDDASSTYSV*
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mRNA from alignment at tig00000212_pilon:624080..625780-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil363.t1 ID=Gchil363.t1|Name=Gchil363.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1701bp|location=Sequence derived from alignment at tig00000212_pilon:624080..625780- (Gracilaria chilensis NLEC103_M9 male)
ATGGTCCGTCTTTCCGTTTTCGTGTGCGTTGCCCTGTTGGCCGCACTCGT
GTCCTCCACCGAGCTTAAGTTTGACGAAGGAGACTCCGTCATTACTGTTC
TCGCCTCGTATGGTGACGCCTCGGCCACCGTCTCCGTCCTGTACAAGGGA
GGAGAAGCCGATGTATCCGTGTCCTCCTCTTCGCTCTTTTCGGCCGGCTC
CCCGAGCGTGGCCGAGGCCGCCGGCGGATATACCAACTACACTATCCCCA
TGTCCTTCAACGGCGGCGTAGGTTCCACCACCTACACCGTCACCGTGGGA
GACCAATCCGTTACCGGAACCGTTATCGTCGCCGGCTTTGTCATTCTCGC
CGACGGCGAAGTGGTGTCCGGCGATGACGGCGAGGGTATCACCGTCGGCC
AGTCGGGCTCCACCAACTACGAGGTCAAGGCCGTTGGTGTTGACGGCGGT
GCCGTTGACATTTCCGGCACTAGCATTACCGGAAAGGAACTCTCCGGTCC
GTACATGAAGGAAATCGACACCAGTGGTACTTCAATCTCGTCCTCCACCT
TCACGCTTCGCATTGCGTCCATGCGCGTGGGTACGGGCAACTTCATCATC
AACTTCGACGCGCCGGCCATCTCACTGGGCGGCGAGTCATTCGAGACCGT
GCTCAATGTGAAGCAGTCCACCTCGCCCGAGCCGGCGTGCGTGGCTTACG
GTGGCGCCGTTACCACATCCGGTGGAATGGTCAAGGTGCCTATGTTCAAT
CTGTTGACGCCGCCCAAGTCCTCGCCGGTGGGCAAGGTCACCATAACCAT
TGGCTCCACCACCGTGGACTGGGACAAGGGCGCGTCTTCGCTGACGCTGC
CTGATCAGATTGTGGCATTTAAAATCTCAGCGGCCGGAACCGCCTCCATC
ACCTGCGACGGTGAACCCGCCGTGGTGATGGGCGATGATATCGTGGCGTC
CGGCGATGATTCGGGCGCGCCGCTGGCCACGACGCTGGTGGCCAAGTTGG
CCGACTCGGAGTCGCAATCTAAGTTCTCCGCCGTGATCAGCGTTGAAAAG
TCGTCTCCGGATGCGCTACTTGCTGTGGACGCGCAGAAGATCCTCGACCG
CTTCTGTTCGAGTATCGGCTCATCGTCTTGTGTGATTGAGGCCGTGCGCA
AGGGATCTGCGCTTCTGGACTGCGCAGGCTACATTGATGGCGAGGACGCC
GTCAAGGCGGAATCGAAACTGGTGAGCGAGTTTGACTCATGCGAGTTCCA
AACGGCGACGGGGTACGCGTGCGACGAGCTGACGCTCGGTGACATGAGCG
TGAACAAGGCCGTGGTGGGGGCTGGCACAGCGGTTGCTGCCTCCGGACTG
GCCACATGGACAATTGTGCTGATTGCCGGCGTGGGCGCGTTCGCGCTGAT
CCTGGTGATCATGCTTGGTCTGTGGGCTGTGTATCGTCGCTCGGCCGAGC
AGTCGGAGAGTGACTATTCGTCTTCTGGACCGCTTGGCGTGCCGGACCCG
TCTGATCTGCTGTACGAGCAGAGCATTGTGCGTGATATCTACGGTCGTGG
CGACTTCCCTGACGGAGGCCCGTCTGCGGCGGTTGCCGAGCAGCGCGCTC
GTGAAGCTGACTTGCGGGAGGAGACCCCGCGACCGCCTTCCTCGTCGGGC
GTGTCGCGCGGCGCGGGCACCGATGACGCGTCGTCTACATACTCTGTGTA
A
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Coding sequence (CDS) from alignment at tig00000212_pilon:624080..625780-

>Gchil363.t1 ID=Gchil363.t1|Name=Gchil363.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1701bp|location=Sequence derived from alignment at tig00000212_pilon:624080..625780- (Gracilaria chilensis NLEC103_M9 male)
ATGGTCCGTCTTTCCGTTTTCGTGTGCGTTGCCCTGTTGGCCGCACTCGT
GTCCTCCACCGAGCTTAAGTTTGACGAAGGAGACTCCGTCATTACTGTTC
TCGCCTCGTATGGTGACGCCTCGGCCACCGTCTCCGTCCTGTACAAGGGA
GGAGAAGCCGATGTATCCGTGTCCTCCTCTTCGCTCTTTTCGGCCGGCTC
CCCGAGCGTGGCCGAGGCCGCCGGCGGATATACCAACTACACTATCCCCA
TGTCCTTCAACGGCGGCGTAGGTTCCACCACCTACACCGTCACCGTGGGA
GACCAATCCGTTACCGGAACCGTTATCGTCGCCGGCTTTGTCATTCTCGC
CGACGGCGAAGTGGTGTCCGGCGATGACGGCGAGGGTATCACCGTCGGCC
AGTCGGGCTCCACCAACTACGAGGTCAAGGCCGTTGGTGTTGACGGCGGT
GCCGTTGACATTTCCGGCACTAGCATTACCGGAAAGGAACTCTCCGGTCC
GTACATGAAGGAAATCGACACCAGTGGTACTTCAATCTCGTCCTCCACCT
TCACGCTTCGCATTGCGTCCATGCGCGTGGGTACGGGCAACTTCATCATC
AACTTCGACGCGCCGGCCATCTCACTGGGCGGCGAGTCATTCGAGACCGT
GCTCAATGTGAAGCAGTCCACCTCGCCCGAGCCGGCGTGCGTGGCTTACG
GTGGCGCCGTTACCACATCCGGTGGAATGGTCAAGGTGCCTATGTTCAAT
CTGTTGACGCCGCCCAAGTCCTCGCCGGTGGGCAAGGTCACCATAACCAT
TGGCTCCACCACCGTGGACTGGGACAAGGGCGCGTCTTCGCTGACGCTGC
CTGATCAGATTGTGGCATTTAAAATCTCAGCGGCCGGAACCGCCTCCATC
ACCTGCGACGGTGAACCCGCCGTGGTGATGGGCGATGATATCGTGGCGTC
CGGCGATGATTCGGGCGCGCCGCTGGCCACGACGCTGGTGGCCAAGTTGG
CCGACTCGGAGTCGCAATCTAAGTTCTCCGCCGTGATCAGCGTTGAAAAG
TCGTCTCCGGATGCGCTACTTGCTGTGGACGCGCAGAAGATCCTCGACCG
CTTCTGTTCGAGTATCGGCTCATCGTCTTGTGTGATTGAGGCCGTGCGCA
AGGGATCTGCGCTTCTGGACTGCGCAGGCTACATTGATGGCGAGGACGCC
GTCAAGGCGGAATCGAAACTGGTGAGCGAGTTTGACTCATGCGAGTTCCA
AACGGCGACGGGGTACGCGTGCGACGAGCTGACGCTCGGTGACATGAGCG
TGAACAAGGCCGTGGTGGGGGCTGGCACAGCGGTTGCTGCCTCCGGACTG
GCCACATGGACAATTGTGCTGATTGCCGGCGTGGGCGCGTTCGCGCTGAT
CCTGGTGATCATGCTTGGTCTGTGGGCTGTGTATCGTCGCTCGGCCGAGC
AGTCGGAGAGTGACTATTCGTCTTCTGGACCGCTTGGCGTGCCGGACCCG
TCTGATCTGCTGTACGAGCAGAGCATTGTGCGTGATATCTACGGTCGTGG
CGACTTCCCTGACGGAGGCCCGTCTGCGGCGGTTGCCGAGCAGCGCGCTC
GTGAAGCTGACTTGCGGGAGGAGACCCCGCGACCGCCTTCCTCGTCGGGC
GTGTCGCGCGGCGCGGGCACCGATGACGCGTCGTCTACATACTCTGTGTA
A
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