Gchil3589.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
|
Overview
Homology
BLAST of Gchil3589.t1 vs. uniprot
Match: R7QRD9_CHOCR (Retrotransposon protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRD9_CHOCR) HSP 1 Score: 236 bits (602), Expect = 1.130e-74 Identity = 116/206 (56.31%), Postives = 147/206 (71.36%), Query Frame = 0
Query: 1 MTFGLTNAPATFQRAIDILLARFKWKPILVYLEDIVVFSDNMDENLSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPIG 206
M FGL NAPATFQR +DILL+ ++WK LVY +DI++FS+ ++E+ +HV+ V+K L+DAG++LKL++C FF +SV YL H IRPG L+ E ++K+A+ T QTELRSFLG CNVYRRFVPNF A PLN LL KG+P +LE F Q+ AF L A SPPIL LP LP +DTDA + QV CALF T +G RHP G
Sbjct: 76 MPFGLCNAPATFQRTLDILLSGYRWKSCLVYFDDIIIFSNFIEEHSTHVQQVLKVLQDAGLSLKLEKCNFFAESVDYLGHVIRPGLLAVAEKNTDAIKKAQERTTQTELRSFLGMCNVYRRFVPNFARTAAPLNVLLAKGKPFQLEKFSVEQSKAFGLLKTAVISPPILKLPRSNLPISVDTDACERQVGCALFQTYPDGTRHPAG 281
BLAST of Gchil3589.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407) HSP 1 Score: 206 bits (524), Expect = 5.790e-58 Identity = 108/206 (52.43%), Postives = 133/206 (64.56%), Query Frame = 0
Query: 1 MTFGLTNAPATFQRAIDILLARFKWKPILVYLEDIVVFSDNMDENLSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPIG 206
M FGL NAPATFQR +DI L+ WK LVYL+DI+VFS E+++H+ V+ L AG+TL LK+C FF ++V YL H IRPG+LS + +LK K T QTELRSFLG CNVYRRFV F +A PLN LLRKG +L P Q SAF +L +A +PPILALP +DTDAS Q+ C L T +G + PIG
Sbjct: 100 MPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTTQTELRSFLGLCNVYRRFVKGFAKIAAPLNLLLRKGETPQLGPLSAEQVSAFETLRDALLNPPILALPRTEGALTLDTDASDHQLGCCLLQTQPDGSQRPIG 305
BLAST of Gchil3589.t1 vs. uniprot
Match: R7QFB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFB9_CHOCR) HSP 1 Score: 199 bits (505), Expect = 7.770e-56 Identity = 97/205 (47.32%), Postives = 138/205 (67.32%), Query Frame = 0
Query: 1 MTFGLTNAPATFQRAIDILLARFKWKPILVYLEDIVVFSDNMDENLSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPI 205
M GLTNAPATFQRA+DILL+ F+WK LVY I++FS + +E++ HV +++ L A + LKL++C+FF + +KYL +RPG L D R +L++ + QT+LRSFLG CNVYRRFVP++ + PLN+LL+KG+ ++LE + F+ L +A PP+LALP LP+ +DTDAS Q+ ALF T + +R PI
Sbjct: 1 MPLGLTNAPATFQRAMDILLSPFRWKCCLVY---IIIFSKSWEEHVVHVDEILSVLEKACVKLKLRKCEFFVEKIKYLGRVVRPGTLEVDAARTAALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIEHPLNQLLKKGQLLQLEGLDEPCEKDFHKLKDAILEPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPI 202
BLAST of Gchil3589.t1 vs. uniprot
Match: R7QRS9_CHOCR (RT_RNaseH_2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRS9_CHOCR) HSP 1 Score: 162 bits (409), Expect = 5.470e-47 Identity = 75/159 (47.17%), Postives = 107/159 (67.30%), Query Frame = 0
Query: 48 HVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPIG 206
HV +++ L AG+ LKL++C+FF + +KYL H +RPG L D R+ +L++ K QT+LRSFLG CNVYRRFVP++ +A PLN+LL+KG+PV+LE F + AF++L EA +PP++ALP LP+ +DTDAS Q+ LF +P G
Sbjct: 3 HVDEIMSVLEKAGVKLKLRKCEFFVEKIKYLGHVVRPGTLEVDAARIAALEQVKYPQTQTQLRSFLGLCNVYRRFVPHYAKIAHPLNQLLKKGQPVQLEGFDEPCKKAFHNLKEAILAPPVVALPKKDLPYSVDTDASDYQIGATLFQRIRMHNENPSG 161
BLAST of Gchil3589.t1 vs. uniprot
Match: R7Q5U0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5U0_CHOCR) HSP 1 Score: 168 bits (426), Expect = 5.200e-46 Identity = 84/148 (56.76%), Postives = 104/148 (70.27%), Query Frame = 0
Query: 59 AGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPIG 206
A + L++C FFT V YL H IRPG LS DEV ++L+E T QTELRSFLG CNVYRRFVPN+ A PLN+LL+KG+P +LEPF +T+ AF++L EA SPPILALP G P+ +DTDAS QV ALF + +G+R IG
Sbjct: 43 ASPVVLLEKCSFFTQEVHYLGHVIRPGTLSIDEVSTRALREIAIPTTQTELRSFLGLCNVYRRFVPNYAHKAAPLNQLLKKGQPAKLEPFDETEIKAFDTLREAVISPPILALPKAGFPYSMDTDASDYQVGTALFQSHEDGQRKHIG 190
BLAST of Gchil3589.t1 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR) HSP 1 Score: 169 bits (427), Expect = 3.560e-45 Identity = 93/206 (45.15%), Postives = 113/206 (54.85%), Query Frame = 0
Query: 1 MTFGLTNAPATFQRAIDILLARFKWKPILVYLEDIVVFSDNMDENLSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPIG 206
M FGL NAPATFQRA+DI+L+R KW+ LVYL+D++ C FF SV YL H IRPGRL + V +++ A+ TNQTELRSFLG CNVYRRFV F +A PLN+ K + E E D + +AF L SPPILALP G + +DTDA QV CAL +G PIG
Sbjct: 121 MPFGLKNAPATFQRAVDIILSRVKWETALVYLDDVI-------------------------------CAFFDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIAAPLNKKTGKNQAYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGARPIG 295
BLAST of Gchil3589.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR) HSP 1 Score: 161 bits (408), Expect = 2.490e-42 Identity = 91/206 (44.17%), Postives = 110/206 (53.40%), Query Frame = 0
Query: 1 MTFGLTNAPATFQRAIDILLARFKWKPILVYLEDIVVFSDNMDENLSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPIG 206
M F L NAPATFQRA+DI+L+R KW+ LVYL+D C FF SV YL H IRPG+L + V +++ A+ TNQTELRSFLG CNVYR FV F VA PLN+ K +P + E D + +AF L SPPILALP G + +DTDA QV CAL +G PIG
Sbjct: 54 MPFALKNAPATFQRAVDIILSRVKWETALVYLDD---------------------------------CGFFDTSVTYLGHVIRPGQLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRWFVQGFAKVAAPLNKNTGKNQPYDFEVLTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIG 226
BLAST of Gchil3589.t1 vs. uniprot
Match: R7Q4V7_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4V7_CHOCR) HSP 1 Score: 158 bits (400), Expect = 8.560e-42 Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = 0
Query: 1 MTFGLTNAPATFQRAIDILLARFKWKPILVYLEDIVVFSDNMDENLSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTST 198
M FGLTN PA FQRA+DILL+ F+WK L AG+ LKL++C+FF + +KYL H +RPG L D R+ +L++ + QT+LRSFLG CNVYR+FVP++ +A PLN+LL+KG+PV +E F + +F+ L A +PP+LALP LP+ + S+++ ++ T
Sbjct: 1 MPFGLTNTPAMFQRAMDILLSPFRWKCCL----------------------------KAGVKLKLRKCEFFVEKIKYLGHVVRPGTLEVDAARIAALEQVRYPQTQTQLRSFLGLCNVYRQFVPHYAKIAHPLNQLLKKGQPVRMEGFDEPCEKSFHKLKGAILAPPVLALPKKDLPYSRNYSVSEKECLAVIWAVQT 170
BLAST of Gchil3589.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR) HSP 1 Score: 159 bits (403), Expect = 9.490e-42 Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 0
Query: 46 LSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVELEPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDASQEQVCCALFLTSTEGERHPIG 206
++HV++V++ L AG++LKL +C FF SV YL H IRPGRL + V +++ A+ TNQTELRSFLG CNVYRRFV F +ATPLN+ K +P E E D + +AF L SPPILALP G + +DTDA QV CAL +G PIG
Sbjct: 1 MAHVREVLRLLHTAGVSLKLAKCAFFDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIATPLNKKTGKNQPYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIG 161
BLAST of Gchil3589.t1 vs. uniprot
Match: Q8W452_BRANA (Reverse transcriptase (Fragment) n=1 Tax=Brassica napus TaxID=3708 RepID=Q8W452_BRANA) HSP 1 Score: 149 bits (377), Expect = 6.730e-41 Identity = 79/186 (42.47%), Postives = 122/186 (65.59%), Query Frame = 0
Query: 1 MTFGLTNAPATFQRAIDILLARFKWKPILVYLEDIVVFSDNMDENLSHVKDVVKTLRDAGITLKLKECKFFTDSVKYLRHKIRPGRLSTDEVRVKSLKEAKCTTNQTELRSFLGSCNVYRRFVPNFTDVATPLNELLRKGRPVEL-EPFRDTQASAFNSLVEAATSPPILALPTLGLPFEIDTDAS 185
M FGLTNAPATF ++ +L + + ++ YL+DIV++S++M+E++ H++ V + LR+ + +K ++C F T+ V++L H I G+L DE +VK++ E + T TELRSFLG N YRRF+ ++ A PL +LL+KG+ + EP ++ AF L A + P+LALP LPFE+ TDAS
Sbjct: 72 MPFGLTNAPATFCTLMNQILQPYLDRFVVAYLDDIVIYSNSMEEHVEHLQTVFRVLRENELFVKREKCTFATEEVQFLGHVIGHGKLKMDEPKVKAIMEWEAPTKVTELRSFLGLVNYYRRFIEGYSRKAAPLTDLLKKGKTWDWSEPCQE----AFEGLKTAVSQEPVLALPDFSLPFELHTDAS 253 The following BLAST results are available for this feature:
BLAST of Gchil3589.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil3589.t1 ID=Gchil3589.t1|Name=Gchil3589.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=208bpback to top |