Gchil356.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil356.t1
Unique NameGchil356.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length253
Homology
BLAST of Gchil356.t1 vs. uniprot
Match: A0A2V3IL72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL72_9FLOR)

HSP 1 Score: 251 bits (642), Expect = 1.190e-80
Identity = 129/229 (56.33%), Postives = 171/229 (74.67%), Query Frame = 0
Query:   23 GNSSPRQLSMVKRVENFHHEIRQAVSVDEERNSSVLQDFTLFFGPIGQGVINVRSGLSASFRFDYRIQGVTSRYLAESDQVFRSSLDQHEKILYDESKRRYDGGLDIPFLSELGMNLSHSHSESALQEAMSAVEDYSKKAIAARRIMESFHGSRLRINGSISAVGVSEMPSRASVYVKVSRVTLIDETVLHVVSSNTNDILAGDGFYNELPIVDIDSDIIQEVEGNPLL 251
            G+S+ + L++VK VE+ HHE+R+ V    ER + VL D  L FGPIGQ  +NVR GL ASF F+YRI GVTS YLA SD +F S+++  E+ILY+E+KR Y+GGLDIPFL +LG++L+ SHS  A    +S  + Y+ KAIAAR+IM+SF G +LRING+IS +GVSE PS A V+VK SRVTL+D TVLHVVSSN +D++AGD  +N LPI  ++S++ QE  GNP +
Sbjct:   23 GDSNLQNLALVKTVEHIHHELREVVKY--ERETQVLSDHALLFGPIGQATLNVRLGLRASFSFNYRIDGVTSAYLAASDHIFTSTMNSRERILYEEAKRGYNGGLDIPFLRQLGIHLNESHSLDA--NLVSRDDYYALKAIAARQIMQSFRGGKLRINGTISVIGVSEQPSTARVFVKFSRVTLVDNTVLHVVSSNNDDVVAGDDSHNMLPIETLESNVAQEEFGNPFI 247          
BLAST of Gchil356.t1 vs. uniprot
Match: R7QSG9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSG9_CHOCR)

HSP 1 Score: 104 bits (259), Expect = 1.650e-23
Identity = 63/206 (30.58%), Postives = 111/206 (53.88%), Query Frame = 0
Query:   21 ACGNSSPRQLSMVKRVENFHHEIRQAVSVDEERNSSVLQDFTLFFGPIGQGVINVRSGLSASFRFDYRIQGVTSRYLAESDQVFRSSLDQHEKILYDESKRRYDGGLDIPFLSELGMNLSHSHSESALQEAMSAVEDYSKKAIAARRIMESFHGSRLRINGSISAVGVSEMPSRASVYVKVSRVTLIDETVLHVVSSNTNDILAGD 226
            A   ++PR++  V  V+N     RQ+     E +   + + T  FG I +  ++V  G +A+  FD  +  + +  +      F  +L   E++ ++E    +DG L++P    LG+N + S S   + EA  ++E++  K+ A   I+ES   SR+RI G++SA G S +P+ A  ++++S VT  D + L VVSSN +D++A D
Sbjct:   17 ALAGAAPRRI--VNVVKNLVPITRQS-----ETSEFAVTETTTGFGRITRVGVSVVRGANATLNFDVTVTAIDAETINSMSSSFVETLTAEERVQFEELVSNFDGSLNLPIFELLGLNFAESISTEQIAEAARSIENFETKSSAVEEILESVVDSRIRITGTLSATGQSNIPTVAFAFIELSTVTFDDGSDLVVVSSNPSDVVAAD 215          
BLAST of Gchil356.t1 vs. uniprot
Match: R7Q301_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q301_CHOCR)

HSP 1 Score: 83.2 bits (204), Expect = 2.190e-16
Identity = 43/124 (34.68%), Postives = 72/124 (58.06%), Query Frame = 0
Query:  103 VFRSSLDQHEKILYDESKRRYDGGLDIPFLSELGMNLSHSHSESALQEAMSAVEDYSKKAIAARRIMESFHGSRLRINGSISAVGVSEMPSRASVYVKVSRVTLIDETVLHVVSSNTNDILAGD 226
             F  +L   E++ ++E    +DG L +P    LG+N + S S   + EA  ++E++  K  A   I+ES   S +RI G++SA G S +P+ A  +++V+ V+  D + L VVS+N ND++A D
Sbjct:    4 TFVETLTAEERVQFEELVSNFDGSLKLPIFELLGLNFAESISTEQIAEAAESIENFETKTTAIEEILESVVDSEIRITGTLSATGQSNIPTVAFAFIEVTDVSFDDGSNLLVVSNNPNDVVAAD 127          
BLAST of Gchil356.t1 vs. uniprot
Match: R7Q6J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6J5_CHOCR)

HSP 1 Score: 72.4 bits (176), Expect = 1.400e-11
Identity = 40/154 (25.97%), Postives = 81/154 (52.60%), Query Frame = 0
Query:   73 INVRSGLSASFRFDYRIQGVTSRYLAESDQVFRSSLDQHEKILYDESKRRYDGGLDIPFLSELGMNLSHSHSESA-LQEAMSAVEDYSKKAIAARRIMESFHGSRLRINGSISAVGVSEMPSRASVYVKVSRVTLIDETVLHVVSSNTNDILAG 225
            ++V  G +A+  F   + G+++  +A+ D ++++ L    K  Y   K  Y GGL++PF++++G +L         L+++  + + + ++  A  +I+     +R++I GS    G S +P     YVKV+RVT  D   + +VS++  D +  
Sbjct:   64 VSVTRGATATISFSITLSGISAVEMAKKDAIYQNILTGSLKKTYMRRKNAYKGGLNLPFMADIGADLRRRKLNGGELRKSRVSKQLFERRLCAVSKILGGVRRARVQIRGSRRVTGTSLIPRTVYGYVKVARVTRTDGKTITIVSTDPRDFVVS 217          
BLAST of Gchil356.t1 vs. uniprot
Match: R7Q4Y7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y7_CHOCR)

HSP 1 Score: 59.3 bits (142), Expect = 9.520e-8
Identity = 34/107 (31.78%), Postives = 63/107 (58.88%), Query Frame = 0
Query:  136 GMNLSHSHSESALQEAMSAVEDYSKKAIAARRIMESFHGSRLRINGSISAVGVSEMPSRASVYVKVSRVTLIDETVLHVVSSNTNDILAGDGFYNELPIVDIDSDII 242
            G ++    S+  L E   + E++ K+  A   I+E+   +R+RING+++A GVS++P+ A  +V+++R+   D +   VVS+   DI+A D   + +   D +SDI+
Sbjct:    6 GADILEDLSKEELVEKRESSEEFRKREQALTSILETVADTRIRINGTLTATGVSQIPTVAFAFVRLARIEFEDGSTQLVVSNKNEDIIAADEDGDAVGTSDQESDIL 112          
The following BLAST results are available for this feature:
BLAST of Gchil356.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IL72_9FLOR1.190e-8056.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSG9_CHOCR1.650e-2330.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q301_CHOCR2.190e-1634.68Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q6J5_CHOCR1.400e-1125.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4Y7_CHOCR9.520e-831.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..252
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:531621..532379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil356.t1Gchil356.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 531621..532379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil356.t1 ID=Gchil356.t1|Name=Gchil356.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=253bp
MNVLQKLLLYVIVLSTAAICACGNSSPRQLSMVKRVENFHHEIRQAVSVD
EERNSSVLQDFTLFFGPIGQGVINVRSGLSASFRFDYRIQGVTSRYLAES
DQVFRSSLDQHEKILYDESKRRYDGGLDIPFLSELGMNLSHSHSESALQE
AMSAVEDYSKKAIAARRIMESFHGSRLRINGSISAVGVSEMPSRASVYVK
VSRVTLIDETVLHVVSSNTNDILAGDGFYNELPIVDIDSDIIQEVEGNPL
LL*
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