Gchil3501.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil3501.t1
Unique Name	Gchil3501.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	624

Homology

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BLAST of Gchil3501.t1 vs. uniprot
Match: A0A2V3IMH2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMH2_9FLOR)

HSP 1 Score: 518 bits (1334), Expect = 2.630e-174
Identity = 295/625 (47.20%), Postives = 397/625 (63.52%), Query Frame = 0

Query:    1 MQTAYVLERYRRLFGSLSHLSFTLSNSDISAAQQAANTSETWQSHYLSPSSVNLRRALSHALLDSISIRHSDNPRYEPDVGIMEGDDGGYTTPASLFQDETIADPSLPCYTLLG---EPASQTSSSVSSSQFESISTVLLAEKALEQLSECVHSSSTDSQVCAPLLSELQAIVTNARMRELRQPDHLANSLHALIDKQKPPAPIRQQLEASVTTARKCAQACRERTLILSQADALLTGLLSASEFKSLHTSGTNVHPPRKRPRAPIFPNPAPFPAPPASLEEILGPTHPIAKNVYCLRRFHSWRSTVVGKVMERRRNPIAKKENIISQISPRAKSPRLRVKKGRKDVVEIFNDAERTALSTPQDRYDAMTRSACALLLAHAGYSHITANAMNLLADIVEEFIMQIGSSLCTVRENVDKGLDADIQSEERGRRKTAAERIDEYKIICESGARGSILELVYYVKCDSQRVSYRVREAEKRLEHQVLNDKIGAALFQDPEEVKAIDATVRAELTNEPGPNDIKFGVKGQDAPITEEDVKLDGEPFILGYLCESVRLDVLGGITVPARVVYRKKTSNKDGIASGRIEKVQRAPRPKNKGPSLQTASTSSVPIASVSPVKAEVKLLDTGE 622
            M TA V+ERYR+ F SLSH S  LS +++ AA++AANT ++W+    S  S NLRR LS ALL +I+   +D+ RYEPD G+++GDDGGY +  SL +++ I     P Y LLG   E    T  S+ S    ++S ++       +      S  ++S+V   L +EL ++++ A+   LR P   A SL  L++K   P P+RQ+ E S++ AR+ A+   +R  I +Q  +LLTGLL+A    S       + PPRKRPR+P F  P+P   PP SL E LG  HP+ KNV  LR F  WR+ ++ KV E R     KKE +ISQ SPR KSPRLR KK R+D +E+FND ER  +S  QDR  A + SACALLLAH  ++H + NA+NLL D+VEEF+ +IG+SL   RENVD           R R KT+ ER +E +IICESG RG   EL+YY + ++ RV+ ++ E +KR EH +++D+ GAAL  DPE++K IDA VRAEL+N+      K   + QD PITEED+KLD EPFI GYL E+VRLDVLG I VPAR++Y KKT+ KD  ASGR+EKVQR+PRPK K   +    +SS P+AS++PVK EV L+   E
Sbjct:    1 MHTANVVERYRKFFRSLSHDSLHLSAAELLAAREAANTPQSWRQLIFSLDSANLRRQLSLALLANITASEADDVRYEPDQGMLDGDDGGYASLHSLLKEDKIRSSFPPPYALLGSTHEAPLPTHGSIPS-PVPALSNIIRDVIDHTEQVRLEMSERSESRVIPALSAELSSMLSKAQQGHLRDPAQCAQSLQQLLEKHSLPEPLRQRFEGSISIARENARLRDQRRSISTQTTSLLTGLLAADASPSALQPLITLRPPRKRPRSPSFTGPSPRSEPPVSLVEFLGSAHPMVKNVNNLRHFRLWRAAIISKVTEMRAKSNLKKEAVISQPSPRVKSPRLRTKKARRDTIELFNDVERAGVSPKQDRIRATSLSACALLLAHVEFTHASTNALNLLCDVVEEFVTRIGASLTACRENVDNNEGTAAHRLGRRRTKTSDEREEELRIICESGFRGGFTELLYYARKEALRVAVKLHEMQKRFEHSLVSDEDGAALRSDPEQIKLIDAAVRAELSNQSRSTGGKIMPRQQDVPITEEDLKLDDEPFIFGYLNEAVRLDVLGNIKVPARILYGKKTTGKDSTASGRVEKVQRSPRPKGKIVPMSFTPSSSTPLASITPVKPEVSLMKVSE 624

The following BLAST results are available for this feature:

BLAST of Gchil3501.t1 vs. uniprot

BLAST of Gchil3501.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMH2_9FLOR	2.630e-174	47.20	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 357..415 e-value: 4.6E-5 score: 25.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 574..603
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 25..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..623
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..32

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004378_pilon	contig	tig00004378_pilon:642494..644365 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil3501.t1	Gchil3501.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004378_pilon 642494..644365 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil3501.t1 ID=Gchil3501.t1|Name=Gchil3501.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=624bp
MQTAYVLERYRRLFGSLSHLSFTLSNSDISAAQQAANTSETWQSHYLSPS
SVNLRRALSHALLDSISIRHSDNPRYEPDVGIMEGDDGGYTTPASLFQDE
TIADPSLPCYTLLGEPASQTSSSVSSSQFESISTVLLAEKALEQLSECVH
SSSTDSQVCAPLLSELQAIVTNARMRELRQPDHLANSLHALIDKQKPPAP
IRQQLEASVTTARKCAQACRERTLILSQADALLTGLLSASEFKSLHTSGT
NVHPPRKRPRAPIFPNPAPFPAPPASLEEILGPTHPIAKNVYCLRRFHSW
RSTVVGKVMERRRNPIAKKENIISQISPRAKSPRLRVKKGRKDVVEIFND
AERTALSTPQDRYDAMTRSACALLLAHAGYSHITANAMNLLADIVEEFIM
QIGSSLCTVRENVDKGLDADIQSEERGRRKTAAERIDEYKIICESGARGS
ILELVYYVKCDSQRVSYRVREAEKRLEHQVLNDKIGAALFQDPEEVKAID
ATVRAELTNEPGPNDIKFGVKGQDAPITEEDVKLDGEPFILGYLCESVRL
DVLGGITVPARVVYRKKTSNKDGIASGRIEKVQRAPRPKNKGPSLQTAST
SSVPIASVSPVKAEVKLLDTGEG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold