Gchil348.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil348.t1
Unique NameGchil348.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length384
Homology
BLAST of Gchil348.t1 vs. uniprot
Match: A0A2V3J5C2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 224 bits (572), Expect = 1.410e-66
Identity = 136/347 (39.19%), Postives = 193/347 (55.62%), Query Frame = 0
Query:    1 MVIIPLKSQHVSLVATFMSVTSETALLFAALRWNCLFENKTLQRRRTINVRNHRTRTKLLAAAATVIFVIIELFNSFYSDPTTVEISERRPCTFLASGGGQKGFTNTTSLSSIILLHCLDANRTTIRQSGGYLFQD---------GNDFVAQC--LDPLYSFSTDNAPQESVPETDYFTGCVELPELAEPLPEDETTVCVFFYQNKARVTFTESVLGSDVPYVVNEKLLLHVWHTDVYFNITGMETEFARRAATMLLESSPPAITLRREVFTVDGVGMCDFKKQIEATTVSEGFIYALALASSLSFLVAVASLFFRSHMCFDMSNPLDWAQKTVISEHLLGAENPEV 336
            MV+IPLKSQ+ SL+ T +S  +E ALL A L +N   E + LQ    +NVR+HR RTK L  AAT+ FV +E+F+SFYSDP       R+ CT L +   Q+G  N ++ ++++ + C+  N T   Q  G +            G+D V +C   + LY+ + + AP E VP+ +Y  GCV              T CVF Y++   VTFT+ V   DV  V+NE + L VW T + +N+TG+E+ FA RA  +L +      TLRR VF    +  C+FK   +AT V +GFIYA+ +A +LS    V S   R  + +DMS+PL WAQKT+    L   +NP V
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVLYTANVERAPDEPVPD-EYVVGCVG-------------TSCVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTTISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNFKTFSDATRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDNDLSDTDNPVV 333          
BLAST of Gchil348.t1 vs. uniprot
Match: A0A2V3ISI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 214 bits (544), Expect = 1.620e-62
Identity = 128/351 (36.47%), Postives = 194/351 (55.27%), Query Frame = 0
Query:    1 MVIIPLKSQHVSLVATFMSVTSETALLFAALRWNCLFENKTLQRRRTINVRNHRTRTKLLAAAATVIFVIIELFNSFYSDPTTVEISERRPCTFLASGGGQKGFTNTTSLSSIILLHCLDANRTTIRQSGGYLFQDGNDFVAQCLDP-LYSFSTDNAPQESVPETDYFTGCVELPELAEPLPEDETTVCVFFYQNKARVTFTESVLGSDVPYVVNEKLLLHVWHTDVYFNITGMETEFARRAATMLLESSPPAITLRREVFTVDGVGMCDFKKQIEATTVSEGFIYALALASSLSFLVAVASLFFRSHMCFDMSNPLDWAQKTVISEHLLGAENPEVFCLDSEEKQFIVLS 350
            MV+IPLKSQ+ SL+AT +S  +E ALL A L +N   E + L+    +NVR+HR RT+ L  AAT+ FV +E+ NSF+SDP        + C  L +   ++G  + +  ++++ ++CL  N + + Q  G +  DG     +C D  L+S    ++P E VP+              E + + E  +C F Y N + VTFTE VL +D+ +V++    L VW T VY+N TGME E  RR+ T+  +       LRREVF       C+F     ATT+ EGF+YA+A+A +LS    + SL  R  + +DMS+PLDWA++TV  E     +NP V        +F++++
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNISDDGE---IKCGDDFLFSADIHHSPNEPVPDE----------HTMECILDGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYALRVWKTTVYYNTTGMERELLRRSITLARDLVTDQFVLRREVFAGAEETECNFDVFSPATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYENGTRFVLVT 338          
BLAST of Gchil348.t1 vs. uniprot
Match: A0A2V3J5A0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 102 bits (254), Expect = 1.210e-20
Identity = 88/332 (26.51%), Postives = 147/332 (44.28%), Query Frame = 0
Query:    1 MVIIPLKSQHVSLVATFMSVTSETALLFAALRWNCLFENKTLQRRRTINVRNHRTRTKLLAAAATVIFVIIELFNSFYSDPTTVEISERRPCTFLASGGGQKGFTNTTSLSSIILLHCLDANRTTI-RQSGGYLFQDGNDFVAQCLDPLYSFSTDNAPQESVPETDYFTGCVELPELAEPLPEDETTVCVFFYQNKARVTFTESVLGSDVPYVVNEKLLLHVWHTDVYF---------NITGMETEFARRAATMLLESSPPAITLRREVFTVDGVGMCDFKKQIEATTVSEGFIYALALASSLSFLVAVASLFFRSHMCFDMSNPLDWAQKT 322
            MV+IPLKSQ+VSL+ T +S+ +E +LL A LR N   E   LQ+   ++V  H+ R   L    T  F  IEL  SFYSDP      + +PC  + +   + G   T+     I+L C+  N + I  + G Y  +      A+    +++      P  S+P         E P   +PL +     CV       + + +++ +     +  +E  +L + ++ + F         N T +  +FA R      E+      LRR +F       C F++  EAT V    I +++    +S      +L     + +D+SNP+ WA++T
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLE----PHVSLPIGTAAAVSSENP-FPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQRTSEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRT 327          
BLAST of Gchil348.t1 vs. uniprot
Match: A0A2V3J6F3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F3_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 2.930e-20
Identity = 99/364 (27.20%), Postives = 158/364 (43.41%), Query Frame = 0
Query:    1 MVIIPLKSQHVSLVATFMSVTSETALLFAALRWNCLFENKTLQRRRTINVRNHRTRTKLLAAAATVIFVIIELFNSFYSDPTTVEISERRPCTFLASGGGQKGFTNTTSLSSIILLHCLDANRTTIRQSGGYLFQDGNDFVAQCLDPLYSFST-DNAPQESVPETDYFTGCVELPELAEPLPEDETTVCVFFYQN------KARVTFTE-SVLGSDVPYVVNEKLLLHVWHTDVYFNITGMETEFARRAATMLLESSPPAITLRREVFTVDGVGMCDFKK-QIEATTVSEGFIYALALASSLSFLVAVASLFFRSHMCFDMSNPLDWAQKTVISEHLLGAENPEVFCLDSEEKQFIVLSNLKKS 355
            MV+I LK+  VS++ T +S  +E ALL      N L E K LQR R++ VR H  RT+LL+      F  +E+  SFY+DP      E   C   ++     G +     +S IL+ C   +  TI Q GG  F      V    + +Y+    D   +E V +  +  GCV   E        E   CVF  Q        A     E S+L   +P+++          T+++F      + FA RA    L++      LRR +++      C F   +  ATTV    I ALA   +++  +  +    R  + F + +P+ WA ++V +      +NP +  L  ++K  + +S  + S
Sbjct:    1 MVLIRLKAPFVSVIVTVLSTLAELALLSFLFVLNNLHECKQLQRGRSVQVRQHLRRTRLLSVVCLGAFFALEVVFSFYNDPVNNVQIEIHECITASNSVKDSGDSTQFLRASDILVECRRLDNGTITQFGGN-FSSRTQQVECSTEAMYTHPLGDETSEEIVADVPF--GCVSGGE--------EGAACVFVQQRGNLSLISAPFFLDELSILPDTLPHII----------TELHFTPPSNVSLFATRATNAFLQNIQGPSALRRIIYSGASEDQCAFPVVRGSATTVPLAMIVALAAVWAVALAMFASVFALRRGVFFKLDDPMHWATRSVRAADDPLGDNPVLTGLMQDDKTLVHISTSESS 343          
The following BLAST results are available for this feature:
BLAST of Gchil348.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J5C2_9FLOR1.410e-6639.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI7_9FLOR1.620e-6236.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A0_9FLOR1.210e-2026.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6F3_9FLOR2.930e-2027.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 305..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..304
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..281
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 282..304
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:445843..446994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil348.t1Gchil348.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 445843..446994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil348.t1 ID=Gchil348.t1|Name=Gchil348.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=384bp
MVIIPLKSQHVSLVATFMSVTSETALLFAALRWNCLFENKTLQRRRTINV
RNHRTRTKLLAAAATVIFVIIELFNSFYSDPTTVEISERRPCTFLASGGG
QKGFTNTTSLSSIILLHCLDANRTTIRQSGGYLFQDGNDFVAQCLDPLYS
FSTDNAPQESVPETDYFTGCVELPELAEPLPEDETTVCVFFYQNKARVTF
TESVLGSDVPYVVNEKLLLHVWHTDVYFNITGMETEFARRAATMLLESSP
PAITLRREVFTVDGVGMCDFKKQIEATTVSEGFIYALALASSLSFLVAVA
SLFFRSHMCFDMSNPLDWAQKTVISEHLLGAENPEVFCLDSEEKQFIVLS
NLKKSCASRVRLDGGSPICFADVPQAQAEMQTQ*
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