Gchil3447.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil3447.t1
Unique Name	Gchil3447.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	364

Homology

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BLAST of Gchil3447.t1 vs. uniprot
Match: R7QBX2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBX2_CHOCR)

HSP 1 Score: 137 bits (346), Expect = 1.920e-33
Identity = 91/210 (43.33%), Postives = 107/210 (50.95%), Query Frame = 0

Query:  137 STSGKRVPTAVCSNCGKAVANNGANFRRHETACRRSRAPVVGVAR--------------------------------------------------------------------------DEELLHTVQRLHNSISSLDVSARVCLRDALLSLSNKAANPTATPTPQQEAMNRAAEYLVLRMLFLSGAQLLMHTAPGTA----PPYPSTSS 268
            S++  RVPTA CS CGK ++ NGANFRRHE ACRR R+  V  AR                                                                          D +LL+ V+RL +SI +LDVSAR+CLRDAL+SLSNKA+NP   PTP+QEAMNRAAEYLVLRMLFLSG Q++ HTAPGT     PP P T S
Sbjct:  128 SSTRPRVPTARCSLCGKNISTNGANFRRHEDACRRQRSERVSSARPPPSAVVTNQHQNQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVQSEPAQLQRGSQSSPVPTQQQPTGMSRRDSDLLNVVRRLESSIHTLDVSARLCLRDALVSLSNKASNPNVPPTPEQEAMNRAAEYLVLRMLFLSGQQVV-HTAPGTVGPTYPPDPQTGS 336

[Close]

BLAST of Gchil3447.t1 vs. uniprot
Match: A0A7S1TBA4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBA4_9RHOD)

HSP 1 Score: 85.9 bits (211), Expect = 1.170e-16
Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = 0

Query:  181 RDEELLHTVQRLHNSISSLDVSARVCLRDALLSLSNKAANPTATPTPQQEAMNRAAEYLVLRMLFLSGAQLLMHTAPGTA 260
            RD +L   ++RL   ISS+D SAR+CLRDALLSLS KA +P+   +P+ E M+RAAEYLVLR+LFL G   +M++APGTA
Sbjct:   52 RDGDLPSILRRLEGIISSVDDSARICLRDALLSLSLKANSPSGR-SPEHEVMSRAAEYLVLRLLFLDGPNQVMYSAPGTA 130

The following BLAST results are available for this feature:

BLAST of Gchil3447.t1 vs. uniprot

BLAST of Gchil3447.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
R7QBX2_CHOCR	1.920e-33	43.33	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A7S1TBA4_9RHOD	1.170e-16	58.75	Hypothetical protein (Fragment) n=1 Tax=Compsopogo...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 97..113 score: 38.82 coord: 74..95 score: 50.0 coord: 62..74 score: 30.77 coord: 42..58 score: 32.94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..141

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004378_pilon	contig	tig00004378_pilon:180796..181887 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil3447.t1	Gchil3447.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004378_pilon 180796..181887 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil3447.t1 ID=Gchil3447.t1|Name=Gchil3447.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=364bp
MGDAPRDSGVFGSLDSLEPDDAMDPMLLNLPAPEPADWALDPLAPDLYPL
AYMDAPSLPASAPPASPSRAPHPPEQPPPPPEPSPPSSPPPPPPPPPPPP
PPPPPLQRAPSAPQASPASSAPRARKRPPPQSPSPSSTSGKRVPTAVCSN
CGKAVANNGANFRRHETACRRSRAPVVGVARDEELLHTVQRLHNSISSLD
VSARVCLRDALLSLSNKAANPTATPTPQQEAMNRAAEYLVLRMLFLSGAQ
LLMHTAPGTAPPYPSTSSHVAPEMQPLAGQGDGDAQAAATAAAAAAAAAA
AATAAAAAAQGAVESHAPSPSPPAPTAVTPPSQQQPQQQQLLAGAAQAGV
SQAVKEHKTAHAP*