Gchil3414.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3414.t1
Unique NameGchil3414.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length298
Homology
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A2V3J407_9FLOR (Reactive Intermediate Deaminase A, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J407_9FLOR)

HSP 1 Score: 399 bits (1026), Expect = 1.350e-137
Identity = 214/292 (73.29%), Postives = 241/292 (82.53%), Query Frame = 0
Query:    8 FVSSFIPNIAYRVCQF--SGSSPKIPQHSSVQSPRIAVVMTGNLSRNSDIKRFLPGPRFNQIVVHKGVVYLAGQVARGT-GGSVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAALQSPAKIINTEDAAAAVGPYNQGVVVNDGTVYVSGCIGLLPRTAVMAGDSVEEQTKQALQNLKAIVEAAGATVHDIVKTSILLDDIADFAAVNSIYSKFFEGGPVPARSCFAAKQLPKAALVEIEAVAKL 296
            FVSSF+P  A     F  S S     QH +    R   V+T +++  SDIKRFLPGPRFNQ+VV+ G+VYLAGQVAR T  GSV  QTR ILAKID LLE AGT+KSRLLT NIW+ D+SK  EMN EW KWVDKDNMPVRACVQS+L+DDSITVEIQATAAL SPA I+ TE+AAAAVGPYNQ VVV+DGTVYVSGCIGLLP+T +MAG SVEEQT+QALQN+KAIVEA GA+VH IVKT+ILLDDI DFAAVN+IYS+FFEGG VPARSCFAAKQLPK+ALVEIEA+AKL
Sbjct:    8 FVSSFVPRNALSATHFVRSVSWAWRAQHRTRSPARTKAVITDSMAGASDIKRFLPGPRFNQVVVYNGIVYLAGQVARDTPDGSVGAQTRQILAKIDRLLETAGTNKSRLLTANIWMTDISKAPEMNEEWAKWVDKDNMPVRACVQSSLLDDSITVEIQATAALSSPATIVKTEEAAAAVGPYNQAVVVDDGTVYVSGCIGLLPKTGIMAGASVEEQTEQALQNIKAIVEAVGASVHSIVKTTILLDDINDFAAVNAIYSRFFEGGAVPARSCFAAKQLPKSALVEIEAIAKL 299          
BLAST of Gchil3414.t1 vs. uniprot
Match: R7QTC6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTC6_CHOCR)

HSP 1 Score: 300 bits (769), Expect = 2.760e-99
Identity = 156/243 (64.20%), Postives = 183/243 (75.31%), Query Frame = 0
Query:   54 DIKRFLPGPRFNQIVVHKGVVYLAGQVARGTGGSVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAALQSPAKIINTEDAAAAVGPYNQGVVVNDGTVYVSGCIGLLPRTAVMAGDSVEEQTKQALQNLKAIVEAAGATVHDIVKTSILLDDIADFAAVNSIYSKFFEGGPVPARSCFAAKQLPKAALVEIEAVAKL 296
            DI+R  PG RF+Q  +H G VYLAGQV R    S   QT  IL K+D+LL +AGTDKSR+L+  +W+ D+++  EMN  W+ WVDK NMPVRA VQS LV D ITVEI   AAL SPAKI+ T+ AAAAVGPYNQGVVV+DGTVYVSGCIGLLP    M    VE QT+QAL+N++AI+ + GA  +DIVKT ILLDD+ADFA VN+IY  FF  G VPARSCFAAK+LPK ALVEIEA AKL
Sbjct:    5 DIRRLQPGARFHQATIHNGTVYLAGQVGRAADRSTYGQTEEILRKVDALLAEAGTDKSRVLSATVWMTDIAEADEMNRAWDAWVDKQNMPVRATVQSRLVADDITVEIGVIAALPSPAKILATDKAAAAVGPYNQGVVVDDGTVYVSGCIGLLPGDGGMVDGGVEGQTRQALENIRAILNSTGAGPNDIVKTGILLDDMADFAKVNAIYKDFFGAGDVPARSCFAAKELPKGALVEIEATAKL 247          
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A5J4Z3P0_PORPP (Reactive Intermediate Deaminase A, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3P0_PORPP)

HSP 1 Score: 254 bits (649), Expect = 2.750e-80
Identity = 134/239 (56.07%), Postives = 179/239 (74.90%), Query Frame = 0
Query:   62 PRFNQIVVHKGVVYLAGQVARGTGG--SVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAALQSP-AKIINTEDAAAAVGPYNQGVVVNDGTVYVSGCIGLLPRTAVMAGDSVEEQTKQALQNLKAIVEAAGAT-VHDIVKTSILLDDIADFAAVNSIYSKFFEGGPVPARSCFAAKQLPKAALVEIEAVAKL 296
            P FNQ+VVH G VY++GQV        +VADQT+++L KID+LL     DKSR+L+ +IW++D+S  +EMN EWE+W+D  N PVRA V++ LV   + VEIQ TAAL    ++I+ T+ AAAAVGPYNQG+   DG +++SGCIGL P+T   AG ++EEQTKQ L NL AI++A GA     I+KT+ILLDD+ADFA VN++YS++F+G  VPAR+CFAAK LPK ALVEIEA+A++
Sbjct:   70 PLFNQLVVHNGTVYISGQVTADATKQTTVADQTKSVLDKIDNLLASVNIDKSRILSASIWLSDISTVAEMNKEWEQWLDVQNKPVRATVEAKLVRPELLVEIQVTAALPPRRSEIVATDLAAAAVGPYNQGIRTADGMLFISGCIGLSPKTGDFAGTTIEEQTKQVLANLDAILKAGGAKGPEQIIKTTILLDDMADFATVNTLYSEYFKGSRVPARACFAAKTLPKNALVEIEAIAEV 308          
BLAST of Gchil3414.t1 vs. uniprot
Match: M2XYU2_GALSU (TdcF protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYU2_GALSU)

HSP 1 Score: 248 bits (633), Expect = 2.030e-77
Identity = 132/261 (50.57%), Postives = 173/261 (66.28%), Query Frame = 0
Query:   39 PRIAVVMTGN-LSRNSDIKRFLPGPRFNQIVVHKGVVYLAGQVARGTGG-SVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAALQSPAKIINTEDAAAAVGPYNQGVVVNDGTVYVSGCIGLLPRTAVMAGDSVEEQTKQALQNLKAIVEAAGATVHDIVKTSILLDDIADFAAVNSIYSKFFEGGPVPARSCFAAKQLPKAALVEIEAVAKLQ 297
            PR++  +TG+ +   S IKR+  GP FNQ+V +  V YLAGQVA  T   +V  Q   I A+ID LL+ AGTDK+RLL+ N+W+ D+   +E N  W  W+D  N PVRA V++ LV   + VE+Q TAAL      + T  AAAAVGPY+QG+V+++GT+YVSGCIGL P+T  +   +V  Q KQAL N+K I+ AAGAT   + KT +LL +I DF  VN IY  FF  G  P+RSCFA K+LPK ALVE E VA+L+
Sbjct:   82 PRMSSTLTGSDVVSQSSIKRYEEGPLFNQMVTYNDVAYLAGQVAPDTSDQTVKGQAEQIFARIDQLLKVAGTDKTRLLSANVWLKDIQHVAEFNEAWNSWIDSTNKPVRATVEAKLVRPELLVEVQVTAALPRRLTPVQTNLAAAAVGPYHQGIVLDNGTIYVSGCIGLNPQTGSLIDSTVVGQAKQALSNMKHILRAAGATPERVTKTLVLLKNIEDFERVNEIYKSFFNNGAYPSRSCFAVKELPKGALVEFECVAQLE 342          
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A7S1XBY1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBY1_9RHOD)

HSP 1 Score: 236 bits (601), Expect = 1.100e-73
Identity = 133/247 (53.85%), Postives = 168/247 (68.02%), Query Frame = 0
Query:   55 IKRFLPGPR----FNQIVVHKGVVYLAGQVARGTGGSVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDK-DNMPVRACVQSTLVDDSITVEIQATAALQSPAKIINTEDAAAAVGPYNQGVVVNDGTVYVSGCIGLLPRTAVMAGDSVEEQTKQALQNLKAIVEAAGATV-HDIVKTSILLDDIADFAAVNSIYSKFFEGGPVPARSCFAAKQLPKAALVEIEAVAK 295
            I+R   GP     F+ + VH   VY+AGQVA      V  QTR +L KI+  L + GTDK+ LL   IW+ D+ +   MN E+++W+   +  PVRA VQ+ +VD SI VEI ATAA  S AK+I TE+AAAAVGPYNQG+   DG ++ SGCIGL P+T   AG+SVEEQT Q L+NL AI++A GA    DI+KT+ILLDDI DFA VN+IY  FF  G VPAR+ F+AK LPK A VEIEA+A+
Sbjct:    9 IRRIGSGPPGLNLFSSVTVHGETVYIAGQVADDRREDVRGQTRQVLGKIEERLREGGTDKAHLLQVMIWLKDIGEVGVMNEEYDQWLAGIEGRPVRATVQAEMVDPSIRVEIMATAARPSRAKVIETEEAAAAVGPYNQGIRTADGLIFASGCIGLDPKTGEFAGESVEEQTHQVLRNLWAILKAGGAAEPSDIIKTTILLDDIGDFAKVNAIYQNFFGSGRVPARATFSAKALPKGAKVEIEAIAQ 255          
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A5J4YVR4_PORPP (RutC family protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVR4_PORPP)

HSP 1 Score: 187 bits (474), Expect = 1.840e-52
Identity = 112/262 (42.75%), Postives = 162/262 (61.83%), Query Frame = 0
Query:   55 IKRFLPGPRFNQIVVHKGVVYLAGQVA--RGTGGSVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAAL----QSPA-------KIINTEDAAAAVGPYNQGVVVNDGTVYVSGCIGLLPRTAVMAGDSVEEQTKQALQNLKAIVE--AAGATVHDIVKTSILLDDIADFAAVNSIYSKFF----EGG-PVPARSCFAAKQLPKAALVEIEAVAKL 296
            I R+ PG  F+Q+VVH G++YLAGQV        +V +QT + LAKID LLE  G  KS +L+ ++W+AD++  +EMN  W  WVD +  PVRA V++ LV  ++ VE+Q  AA+    QS A       + + TE A  AVGPY+Q VVV D  V+VSGC+GL P+T  +    +E Q  +AL NL+A+++  A+G+    IV+ ++++ D+ DF  +N +Y  F     EG  P PAR+ F    LPK ALV I+A+A+L
Sbjct:  187 IVRYEPGTSFSQMVVHGGIIYLAGQVTDDEHQKTTVGEQTSSCLAKIDRLLEMGGGHKSSILSASVWLADIATVAEMNAVWNAWVDPECKPVRATVEAKLVRPTLLVEVQVVAAVGAADQSGALPKQPCLRSVQTELAGKAVGPYSQAVVVEDEYVFVSGCLGLDPKTDTLVDGGIETQAVRALANLEAVLKNSASGSVSPRIVRMTLMVKDMRDFGRINDLYGAFLNNYHEGQYPKPARTAFQVAALPKEALVMIDAIARL 448          
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A1X6PE35_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PE35_PORUM)

HSP 1 Score: 141 bits (355), Expect = 7.000e-38
Identity = 86/174 (49.43%), Postives = 109/174 (62.64%), Query Frame = 0
Query:  129 MNTEWEKWVDKDNMP-VRACVQSTLVDDSITVEIQATAALQSPAKI--INTEDAAAAVGPYNQGVVVNDGTVYVSGCIGLLPRTAVMAGDSVE----EQTKQALQNLKAIVEAAGATVHDIVKTSILLDDIADFAAVNSIYSKFFEGGPVPARSCFAAKQLPKAALVEIEAVAK 295
            MN  W  W+        RA V + LV   + VE+  TAA+  P  +  + T+ AAAAVGPY+QGVVV  G VYVSGC+GL  R+    G  VE     QTKQAL N+ A++ AAG TVHD+VKTSI++ D+ DFAAVN +YS+   G   PAR+CF    LP  A+VEIE +AK
Sbjct:    1 MNEAWAAWLGPTTPRCTRATVGAPLVRPELLVEVVVTAAIPPPVPVGRVATDGAAAAVGPYSQGVVVEGGLVYVSGCVGL--RSPADGGGLVEGGVVAQTKQALANMSAVLAAAGCTVHDVVKTSIMVTDMGDFAAVNGVYSEVM-GDAKPARACFGVAALPVGAVVEIECIAK 171          
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A2S6R4D1_9PROT (2-iminobutanoate/2-iminopropanoate deaminase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R4D1_9PROT)

HSP 1 Score: 134 bits (338), Expect = 4.210e-36
Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 0
Query:   55 IKRFLPGPRFNQIVVHKGVVYLAGQVARGTGGSVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAA 166
            I R  PGPR +Q VVH   VY AGQVA  +   VA QTR +LAKIDSLL +AG+DKS++L   IW+AD+SKFSEMN+ W+ WVD DN PVRACV+S L    + VEIQ  AA
Sbjct:    3 ITRIKPGPRMSQTVVHAHTVYTAGQVADDSSADVAGQTRQVLAKIDSLLAEAGSDKSKILKATIWLADISKFSEMNSVWDAWVDTDNPPVRACVESKLAVPELKVEIQVEAA 114          
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A1G6A6C7_9HYPH (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6A6C7_9HYPH)

HSP 1 Score: 133 bits (334), Expect = 1.770e-35
Identity = 69/113 (61.06%), Postives = 82/113 (72.57%), Query Frame = 0
Query:   55 IKRFLPGPRFNQIVVHKGVVYLAGQVA-RGTGGSVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAA 166
            I+R     R +Q+V H  VVYLAGQVA R  G SVADQTR ILA+ID LL +AGTDKS+LL  N+W+ADMS F EMN EW+KWV +   PVRACV++ L D + TVEI  TAA
Sbjct:    3 IERKHVNQRMSQVVTHGDVVYLAGQVASRAPGASVADQTRDILARIDELLAEAGTDKSKLLAANLWLADMSTFDEMNGEWDKWVAEGQPPVRACVEAKLADPAFTVEIMVTAA 115          
BLAST of Gchil3414.t1 vs. uniprot
Match: A0A2S6RH51_9PROT (2-iminobutanoate/2-iminopropanoate deaminase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin1 TaxID=2013103 RepID=A0A2S6RH51_9PROT)

HSP 1 Score: 127 bits (319), Expect = 2.870e-33
Identity = 61/112 (54.46%), Postives = 80/112 (71.43%), Query Frame = 0
Query:   55 IKRFLPGPRFNQIVVHKGVVYLAGQVARGTGGSVADQTRAILAKIDSLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQSTLVDDSITVEIQATAA 166
            I R  PG R +Q VVH   VY AGQ+A  +   VA QTR +LAKID LL +AG+DKS++L   IW+ D+S+F+EMN+ W+ WVD+DN PVRACV+STL   +++VEI   AA
Sbjct:    3 ITRIKPGARMSQCVVHGDTVYTAGQIADDSSEDVAGQTRQVLAKIDGLLAEAGSDKSKILKATIWLTDISRFNEMNSVWDAWVDQDNPPVRACVESTLAMPALSVEIMVEAA 114          
The following BLAST results are available for this feature:
BLAST of Gchil3414.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J407_9FLOR1.350e-13773.29Reactive Intermediate Deaminase A, chloroplastic n... [more]
R7QTC6_CHOCR2.760e-9964.20Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z3P0_PORPP2.750e-8056.07Reactive Intermediate Deaminase A, chloroplastic n... [more]
M2XYU2_GALSU2.030e-7750.57TdcF protein n=1 Tax=Galdieria sulphuraria TaxID=1... [more]
A0A7S1XBY1_9RHOD1.100e-7353.85Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YVR4_PORPP1.840e-5242.75RutC family protein n=1 Tax=Porphyridium purpureum... [more]
A0A1X6PE35_PORUM7.000e-3849.43Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2S6R4D1_9PROT4.210e-3659.822-iminobutanoate/2-iminopropanoate deaminase n=1 T... [more]
A0A1G6A6C7_9HYPH1.770e-3561.06Enamine deaminase RidA, house cleaning of reactive... [more]
A0A2S6RH51_9PROT2.870e-3354.462-iminobutanoate/2-iminopropanoate deaminase n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 55..168
e-value: 3.6E-29
score: 103.0
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 169..296
e-value: 4.0E-40
score: 138.8
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 58..168
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 172..296
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 177..295
e-value: 3.9E-34
score: 117.2
coord: 61..166
e-value: 3.7E-23
score: 81.8
IPR006175YjgF/YER057c/UK114 familyPANTHERPTHR118032-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDAcoord: 64..167
coord: 172..295
IPR006056RidA familyTIGRFAMTIGR00004TIGR00004coord: 172..294
e-value: 9.0E-43
score: 143.4
NoneNo IPR availablePANTHERPTHR11803:SF392-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASEcoord: 64..167
coord: 172..295
NoneNo IPR availableCDDcd00448YjgF_YER057c_UK114_familycoord: 186..294
e-value: 2.08645E-41
score: 137.305
IPR019897RidA, conserved sitePROSITEPS01094UPF0076coord: 272..290
IPR035709RutC family, YoaB-likeCDDcd06150YjgF_YER057c_UK114_like_2coord: 62..166
e-value: 1.10428E-49
score: 158.47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:1061866..1062759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3414.t1Gchil3414.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 1061866..1062759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3414.t1 ID=Gchil3414.t1|Name=Gchil3414.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=298bp
MENTACTFVSSFIPNIAYRVCQFSGSSPKIPQHSSVQSPRIAVVMTGNLS
RNSDIKRFLPGPRFNQIVVHKGVVYLAGQVARGTGGSVADQTRAILAKID
SLLEQAGTDKSRLLTTNIWIADMSKFSEMNTEWEKWVDKDNMPVRACVQS
TLVDDSITVEIQATAALQSPAKIINTEDAAAAVGPYNQGVVVNDGTVYVS
GCIGLLPRTAVMAGDSVEEQTKQALQNLKAIVEAAGATVHDIVKTSILLD
DIADFAAVNSIYSKFFEGGPVPARSCFAAKQLPKAALVEIEAVAKLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf
IPR006175YjgF/YER057c/UK114
IPR006056RidA
IPR019897RidA_CS
IPR035709YoaB-like