Gchil3349.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A2V3IPV7_9FLOR (THO complex subunit 4C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPV7_9FLOR) HSP 1 Score: 377 bits (969), Expect = 4.500e-129 Identity = 207/293 (70.65%), Postives = 221/293 (75.43%), Query Frame = 0
Query: 1 MLDHHESTXXXXXXXXXXXXXXXXVRDPKTGETRVXXXXXXXXXXXXXXTTLPSSSGAPSPSPPSSYRYRSGADSEYDRRTNGYPPFDDQGRAPIMKIVSGYRGRQIVVRDPSRRMQPQAPPQGASLGVRGGVRKNYYDRRGTRSSPYSEEYEXXXXXXXXXXXXXDRLYSHGRDNDYARTHHMNEYERGFEPQHGYYRRNRSDAQNDDEDLAGKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGI 293
MLDHH+S VRDPKTGETR+ S++ APS PPS YRYRSG D++YDR+ N YPPFDDQGRAPIMKIVSGYRGRQIVVRDPSRR QP A PQGA+LGVRGGVRKNYYDR+GTRSSPYSEEYE XXXXXX H MN+Y+R +E QHGYYRRNRSD QNDDEDL GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDR+GNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNG+
Sbjct: 6 MLDHHDSAPPPTHPSSFRRRPIV-VRDPKTGETRLVGGGPPGPAARRPNF---STASAPSQPPPSGYRYRSGFDADYDRQQNPYPPFDDQGRAPIMKIVSGYRGRQIVVRDPSRRPQPPAQPQGANLGVRGGVRKNYYDRKGTRSSPYSEEYEDDRRPDYXXXXXXXXXXXXXXXXXXXXDHRMNDYDRPYEGQHGYYRRNRSDVQNDDEDLTGKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDRDGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGL 294
BLAST of Gchil3349.t1 vs. uniprot
Match: R7Q7Q7_CHOCR (THO complex subunit 4-like n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Q7_CHOCR) HSP 1 Score: 214 bits (546), Expect = 2.520e-64 Identity = 144/285 (50.53%), Postives = 161/285 (56.49%), Query Frame = 0
Query: 25 VRDPKTGETRVXXXXXXXXXXXXXXTTLPSSSGAPSPSPPSSYRYRSGADSEYDRRTNGYPPFDDQGR---APIMKIVSGYRGRQIVVRDPSRRMQPQAPPQ---GASLGVRGG-VRK-NYYDRRGTRSSPYSEEYEXXXXXXXXXXXXXD-----RLYSHGRDNDYARTHHMNEYERGFEPQHGYYRRNRSDAQND---DEDLAGKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGI 293
VRDPKTG+TRV T Y +GA GY DD AP++KIVSGYRGRQIVVRDP++R PQ G LGVRGG VRK NYYDRRG R + YS E D R+Y GRD Y + + + G Y RN + N +DL GKVV+VDNLSDDVTT GLADLF MVG VKELRLLYDR+GNPNGSADIVFQ RADAE AIK+L NVPLNNRPMRLSMGNG+
Sbjct: 88 VRDPKTGDTRVIQGGHQRGASVGVGVT-----------------YGNGA------ARGGYRGMDDAAEFEDAPVVKIVSGYRGRQIVVRDPAKRGATDINPQHVAGGPLGVRGGGVRKTNYYDRRGPRDTSYSPERYGDKRSGRGAPYYEDDEEDRRMYGRGRDQ-YDGSQMVAAHGYGDSRYDRDYYRNANAGHNGVPAHDDLTGKVVYVDNLSDDVTTRGLADLFSMVGTVKELRLLYDRQGNPNGSADIVFQHRADAEEAIKSLHNVPLNNRPMRLSMGNGL 348
BLAST of Gchil3349.t1 vs. uniprot
Match: UPI00053B2972 (THO complex subunit 4C-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B2972) HSP 1 Score: 71.6 bits (174), Expect = 9.230e-11 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 0
Query: 214 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNG 292
G V++ NL VT + +L+ +G +K + +DR G PNGSA++V+ RR+DA A+K +NV L+ RPMRL + G
Sbjct: 103 GTTVYITNLDQGVTNEDIRELYAEIGELKRYAVHFDRNGRPNGSAEVVYMRRSDAMLAMKKYNNVLLDGRPMRLEILGG 181
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A8J2NV81_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2NV81_9HEXA) HSP 1 Score: 68.2 bits (165), Expect = 1.150e-9 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query: 217 VFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGN 291
+ + NL V+ + +LFG VG ++ + YDR G G AD+ F+RR DA+AAI+ D VPL+ RPM +S N
Sbjct: 112 ITISNLHYGVSDADIIELFGEVGNIRYASVHYDRSGRSMGKADVTFERRVDAQAAIQQYDGVPLDGRPMAISWAN 186
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A834LPE5_RHOSS (RRM domain-containing protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LPE5_RHOSS) HSP 1 Score: 67.8 bits (164), Expect = 1.340e-9 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 214 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 289
G +F+ NL V+ + +LF VG VK + YDR G G+A++VF RR DAEAA+K +NV L+ +PM++ +
Sbjct: 93 GTKLFISNLDYGVSGEDVKELFAEVGDVKRYSIHYDRSGRSKGTAEVVFSRRKDAEAAVKRYNNVQLDGKPMKIEI 168
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A0M0JT49_9EUKA (Tho complex subunit 4 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JT49_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 1.340e-9 Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 0
Query: 214 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGI 293
G V V NL+ +VT+ + +LFG +GA+K + LL +G+ G A +VF+R+ADAE A++ + VPL+ RP+++S+ + +
Sbjct: 85 GTTVKVANLAFNVTSEDIEELFGEIGALKSVSLLTKEDGSSRGMALVVFKRKADAETALEKYNGVPLDGRPLKISLQSNL 164
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A2I4DVX9_JUGRE (THO complex subunit 4D-like n=3 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4DVX9_JUGRE) HSP 1 Score: 68.2 bits (165), Expect = 1.520e-9 Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 0
Query: 214 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 289
G +++ NL VT + +LF +G +K + YD+ G PNGSA++V+ RR+DA AA+K +NV L+ +PMR+ +
Sbjct: 95 GTKLYISNLDYGVTNEDIRELFCEIGDLKRYAVHYDKNGRPNGSAEVVYTRRSDAVAALKRYNNVLLDGKPMRIEI 170
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A396IQW2_MEDTR (Putative chromatin target of PRMT1 protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396IQW2_MEDTR) HSP 1 Score: 65.5 bits (158), Expect = 5.130e-9 Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = 0
Query: 217 VFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 289
++V NL VT + +LF +G +K + YD+ G+P GSA++V+ RR+DA AA+K +NV L+ +PM++ +
Sbjct: 31 LYVSNLDRGVTNEDIRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEI 103
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A834HD54_RHOSS (RRM domain-containing protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834HD54_RHOSS) HSP 1 Score: 65.9 bits (159), Expect = 5.520e-9 Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 214 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 289
G ++V NL V+ + +LF VG +K + YDR G G+A++VF RR DA+AA+K +NV L+ +PM++ +
Sbjct: 82 GTKLYVSNLDYGVSNDDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRQDAQAAVKRYNNVQLDGKPMKIEV 157
BLAST of Gchil3349.t1 vs. uniprot
Match: A0A1X6P4P6_PORUM (RRM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4P6_PORUM) HSP 1 Score: 66.6 bits (161), Expect = 6.030e-9 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 0
Query: 199 RRNRSDAQNDDEDLAGKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 289
R+ + A N + AG + V NL VT + DLF VG ++ ++YD GN G A++VF RR DA +IK + VPL+N+P+R+S+
Sbjct: 118 RKAAAAAANASKANAGCKIVVHNLHHGVTNGDINDLFSGVGKLQRALVIYDVRGNSTGVAEVVFARRDDALESIKRYNGVPLDNKPLRISL 208 The following BLAST results are available for this feature:
BLAST of Gchil3349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil3349.t1 ID=Gchil3349.t1|Name=Gchil3349.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=294bpback to top |