Gchil3240.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3240.t1
Unique NameGchil3240.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length279
Homology
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A2V3IVI7_9FLOR (CDAN1-interacting nuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVI7_9FLOR)

HSP 1 Score: 387 bits (994), Expect = 4.420e-133
Identity = 187/263 (71.10%), Postives = 220/263 (83.65%), Query Frame = 0
Query:    1 MLASEWMRICSLLRCKEDISTLAKAQPDIGYDTISLIYDQLYARQVAKTFYLVRMHSKAFVEMFKSGLSLMEISERFNLSPSLVARKVLELHLDLNRKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPADVGMLPGSNIF 263
            ML  EW+ +CS LRCKEDIS +A+ QP + +DTI+LIY+QLY RQVA+TFY V++H K FV+ FK+G SL++I+E FNLSP LVARKV+ELHL LNRK ITQ +R+PS I DERLR DV LC+E+DEHCSPR DRLR ALGLEYELRL  EV N G EFETE+DLR RGCHKTPDILL VP+ FRNKV+RWIDSKAKFGD+YTLN+DY SSVSSY+GRFGPGMVIYWFGFIEDC+S ML DNGL++   FP ++  LPGS+ F
Sbjct:    1 MLNVEWLSLCSSLRCKEDISRIAREQPHLSHDTIALIYEQLYTRQVARTFYQVKLHGKTFVKNFKNGQSLLDIAESFNLSPVLVARKVMELHLGLNRKLITQALREPSMIGDERLRADVCLCIELDEHCSPRTDRLRHALGLEYELRLRDEVKNCGFEFETEDDLRNRGCHKTPDILLRVPISFRNKVIRWIDSKAKFGDKYTLNQDYTSSVSSYIGRFGPGMVIYWFGFIEDCDSGMLNDNGLVVMDRFPTEIETLPGSSRF 263          
BLAST of Gchil3240.t1 vs. uniprot
Match: M2X2F4_GALSU (CDAN1-interacting nuclease 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2F4_GALSU)

HSP 1 Score: 208 bits (530), Expect = 1.410e-62
Identity = 108/265 (40.75%), Postives = 159/265 (60.00%), Query Frame = 0
Query:    1 MLASEWMRICSLLRCKEDISTLAKAQPDI--------GYDTISLIYDQLYARQVAKTFYLVRMHSKAFVEMFKSGLSLMEISERFNLSPSLVARKVLELHLDLNRKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPADVGML 257
            M   E+  +CS L  ++D+  L+     +         Y+T+  IY Q Y  +VA               ++ SG  L++ISER N++P +  R++LE +    +K I++ +R+P  I D+RLR +V  C+E DEH  P  DR+R   GL+YE  L   +  +G+ F+TE  LR +G  KTPD LL+VPV     V+ WIDSKAKFGDEY L +DY  S+SSY+GR+G GMVIYWFGF+ED +  ML D G++++ SFP ++ ++
Sbjct:   50 MRLQEYEALCSQLHSRKDVYLLSGISSSLRENESTSYNYETLYAIYSQRYQTEVAAVAREALKELCLLSTLYDSGQHLLDISERLNVAPCITVRRLLE-YKSFGKKQISRVLRNPYEIKDDRLRQEVIACIEQDEHYGPFADRMRQVQGLDYEYILYQHLEIMGIPFDTETSLRCKGLFKTPDALLHVPVKVGTNVISWIDSKAKFGDEYYLRRDYNDSISSYVGRYGSGMVIYWFGFLEDIDVPMLHDQGVVLSSSFPKNIELV 313          
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A3P3YCX7_PLABS (CDAN1-interacting nuclease 1 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YCX7_PLABS)

HSP 1 Score: 179 bits (453), Expect = 1.200e-51
Identity = 93/234 (39.74%), Postives = 149/234 (63.68%), Query Frame = 0
Query:   22 LAKAQPD--IGYDTISLIYDQLYARQVAKTFYLVRMHSK--AFVEMFKSGLSLMEISERFNLSPSLVARKVLELHLDLNRKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNKVVRWIDSKAKFGDEYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFP 251
            LA+  P+  + Y+T+  IY Q Y  Q     ++ +  +   ++V+ ++ G  L+ I++  +L+P L+AR +L   L ++ K ITQ +R+P+ + DERLR+ +  CVE DEH SP  +R+R+ALGLEYE  L   + N G+ F++E+DLR+ G  KTPD+ L  P+  R ++V WIDSKA FGD  TL  D  + V  Y+ R+GPGM+I+WFG++++ +S    D  ++++  FP
Sbjct:   26 LAEEWPEYVVPYETLVAIYTQTYQLQTRMRMHVHKRQTNIDSYVQRYQEGEELISIAKSIDLAPCLLARIILRETLSMSPKDITQCLREPALVDDERLRNQLVRCVESDEHYSPSSERIRSALGLEYEFVLYESLFNTGVPFDSEDDLRREGRPKTPDVRLRSPIAVRGRIVNWIDSKAMFGDVRTL-ADCQNQVRGYVHRYGPGMIIFWFGYVQEVDS----DPDIILSHGFP 254          
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A5J4Z6J7_PORPP (CDAN1-interacting nuclease 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6J7_PORPP)

HSP 1 Score: 163 bits (412), Expect = 3.610e-45
Identity = 89/206 (43.20%), Postives = 125/206 (60.68%), Query Frame = 0
Query:   69 SLMEISERFNLSPSLVARKVLELHLDLNRKSITQFMRDPSNITDE--RLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNK--------------------VVRWIDSKAKFGDEYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPA 252
            S++E++   + SP  + R+VLE     +++ IT   +DP  +      +   +   +E D+  +P  DRLR ALG+EYE+RL   + NLG  FETE+DLR RG  KTPD LL+VP+  + K                    +V WIDSKAKFGD  +L +DYVSS++SY+GRFGPG+V+YWFGF+ED N  ML D G+L+   FP+
Sbjct:   79 SVLEVARIASTSPCTLVRRVLEGR-GWSKREITDAFKDPERVLQRFPYIHGPLLTALEHDDIYAPAGDRLRRALGIEYEIRLQQHLENLGARFETEDDLRLRGEFKTPDALLHVPIAVQVKTRTRVGNAATTPFEEQSEIRLVTWIDSKAKFGDHDSLKQDYVSSIASYVGRFGPGLVLYWFGFVEDANVPMLSDRGVLVMDEFPS 283          
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A3M6V6U0_9STRA (CDAN1-interacting nuclease 1 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6U0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.460e-40
Identity = 101/281 (35.94%), Postives = 149/281 (53.02%), Query Frame = 0
Query:    5 EWMRICSLLRCKEDISTLAKAQPDIGYDTISLIYDQLYARQVAKTFYLVRMHS--KAFVEMFKSGLSLMEISERFNLSPSLVARKVLELHLDLNRKSITQFMRDP-----------------SNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNK------VVRWIDSKAKFGDEYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPADVGMLPGS 260
            E+  ICSL       STL   Q  +  +T S+I  QL  RQ   T  L R +   K +V  F +G S+ EI+   + SP ++ R VLE     ++ +I+   +D                  SN    R+  +++ C+E D +CSP  DR+R  +G+EYE  L+  + N  L FE+E+ LR++G  KTPD+ L VP+  ++       VV WIDSKA FGD +T   +  S +  Y+ R+GPGMVIYWFG +   +S     + + IT SFP D+ +LPG+
Sbjct:    5 EYRLICSLDTFS---STL---QLTVTNETFSVIKRQLQHRQFRSTLRLHRQNKSLKMYVARFDTGESMCEIATSVDFSPCMMVRLVLEHKYGWSKTTISNVFKDAMTDDESQRDSLLNRRGLSNEEYTRVIQEIQECIEKDVYCSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLVPIGVKDSKHGQLHVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGHVAQLDSG----SDIFITDSFPPDI-LLPGA 274          
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A4Y2LKV1_ARAVE (CDAN1-interacting nuclease 1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LKV1_ARAVE)

HSP 1 Score: 147 bits (371), Expect = 6.420e-39
Identity = 93/269 (34.57%), Postives = 148/269 (55.02%), Query Frame = 0
Query:   29 IGYDTISLIYDQLYARQVAKTFYL------VRMHSKAFVEMFKSGL----SLMEISERFNLSPSLVARKVLELHLDLN-------------RKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNKVVRWIDSKAKFGDEYTLNKDYV-SSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPADVGMLPGSNIFLACKEDDEAN 273
            I   T+S I  Q   R+  KT++       V  + K ++   +S      +L++I++  +LSP+L+AR +LE HL L+             +  I++ +++PS I D+ L  +V+LC  +D +  P  D +R   GLE E RL  ++  LG+ F  E  LR++G  KTPDI L +P+++   V+ WI+SKA FGDE   +K+Y+     SY  RFGPG+VIYW G+IE+ NS    + G++I+ S P ++  +  S +      DD  N
Sbjct:   41 IPVTTLSSIVAQEVQRKTKKTYHYHTAPHNVSKYYKKYLNELESNDEQCGALLKIADEVDLSPALMARLILEHHLKLSLEGKNSDEKEAVPKSMISEMLKNPSLIQDKYLGAEVKLCTLVDNYYGPLSDVIRNVSGLETENRLKDDLTKLGISFIDEKQLREKGYDKTPDIKLDIPIVYEGHVINWIESKASFGDEER-HKEYLRDQYWSYYNRFGPGLVIYWSGYIEELNS--FTEQGIIISDSVPTEISFMDPSVLMKKTYTDDNVN 306          
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A7S2SDJ1_9STRA (CDAN1-interacting nuclease 1 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDJ1_9STRA)

HSP 1 Score: 146 bits (368), Expect = 8.270e-39
Identity = 89/242 (36.78%), Postives = 132/242 (54.55%), Query Frame = 0
Query:   27 PDIGYDTISLIYDQLYARQVAKTFYLVRMHSKAFVEMFKSGLSLMEISERFNLSPSLVARKVLELHLDLNRKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRN------KVVRWIDSKAKFGDEYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPADVGMLPGSNI 262
            PDI  + I  +  Q++ R +      VR  S   +  ++ G  ++ I++ F   P L+AR V+E    +  K I   +R P  ITD RLR +V+   E D  C+PR D +R  +G EYE  L   +  LG+ ++TE DL+ +G  KTPD  L  PV  ++      + V WIDSKA FGD  T  K++   + SY+ RFGPG+V+YWFGF E+      LDN + I+   P  + +LPG ++
Sbjct:   34 PDIDIEAILSLRRQIHTRWIRANTPRVRGASAEILRRWQKGEHVISIAKAFRHPPFLLARGVVERVCHVTGKRIGDLVRHPERITDPRLRREVQEAAEADPDCAPRSDAIREVIGREYEFVLQRRLEALGVPYQTEEDLKTQGHSKTPDAWLRAPVAVQDPRVGEWRQVCWIDSKAMFGDVETFGKEHSMQLESYVHRFGPGLVVYWFGFDEELPR---LDN-ICISTDVPIQM-VLPGGDV 270          
BLAST of Gchil3240.t1 vs. uniprot
Match: UPI000A2A6734 (uncharacterized protein C15orf41 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6734)

HSP 1 Score: 146 bits (368), Expect = 1.060e-38
Identity = 90/248 (36.29%), Postives = 141/248 (56.85%), Query Frame = 0
Query:   29 IGYDTISLIYDQLYARQVAKTFYLVRMHSKAFVEMFKS----GLS-------LMEISERFNLSPSLVARKVLELHL--------DLNRKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNKVVRWIDSKAKFGDEYTLNKDYVSSVS-SYLGRFGPGMVIYWFGFIE--DCNSRMLLDNGLLITGSFPADV 254
            + Y+T+  IY Q Y ++  K  +  R H    +E + +    G+S       ++ I+E  +LS +L AR VLE HL        +  R  ++Q ++DPS + D+ +  +++ C+  D +  P +D ++ ++G EYEL L  ++ N  + F +E D+R RG  KTPD  L +P+     VV WI+SKA FGDEY+ N+ Y+     SY  RFG G+VIYWFGFI+  DCN     D G++I  SFP+++
Sbjct:   32 VTYNTLISIYSQDYQKKTRKNHH--RHHKPEVMEEYYNRYLQGISEKSBEPVMLRIAEEVDLSHALFARIVLERHLAHTCYNGENAPRAVVSQIIKDPSLLEDKTMAYEIQQCILNDPNYGPLVDNIKRSIGYEYELILKEKLQNRDIPFISEEDMRARGYDKTPDFKLEIPIAVDGYVVNWIESKASFGDEYS-NQTYLKEQFWSYWNRFGSGLVIYWFGFIDELDCNR----DRGIVIMDSFPSNI 272          
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A293M0D6_ORNER (CDAN1-interacting nuclease 1 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M0D6_ORNER)

HSP 1 Score: 144 bits (363), Expect = 4.330e-38
Identity = 89/255 (34.90%), Postives = 144/255 (56.47%), Query Frame = 0
Query:   15 CKEDISTLAKAQPDIGYDTISLIYDQLYARQVAKTFYLVRMHSKAFVEMFKSGLS------LMEISERFNLSPSLVARKVLELHL-----DLNRKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNKVVRWIDSKAKFGDEYTLNKDYV-SSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPADVGML 257
            C+E+   L K  P +   TI  I  Q   R   K ++ +   +    + +K+  +      L+  ++   L+PSL+AR +++ H      D +++ +++ MRD + I D +L  +V LC+  D    P MD  R ++GLEYE++L H++  LGL F  E  LR+RG  KTPD+ L VPV+  + V+ W++SKA FGD    +K Y+     SY  RFG G+VIYWFGFI++ +     ++G+LI+   PAD+ ++
Sbjct:   21 CEEE---LQKIFPAVKESTIRCIVYQERQRYTKKNYHRLTAAADKHYDFYKAVSNDETRGFLLRYADDIGLAPSLLARLIIQKHFENVGEDTSKQRLSEAMRDTTTINDGKLAVEVFLCILNDNAYGPIMDVTRHSVGLEYEIKLKHDLRELGLVFVDEEVLRERGYDKTPDVKLEVPVVIGDTVITWVESKALFGDVEN-HKTYMREQYRSYWNRFGRGLVIYWFGFIDELDRNG--EDGILISDRIPADIRLM 269          
BLAST of Gchil3240.t1 vs. uniprot
Match: A0A2P6NJE6_9EUKA (CDAN1-interacting nuclease 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NJE6_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 5.430e-38
Identity = 82/222 (36.94%), Postives = 133/222 (59.91%), Query Frame = 0
Query:   57 SKAFVEMFKSGLSLMEISERFNLSPSLVARKVLELHLDLN-------RKSITQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIHEVM-------------NLGLEFETENDLRKRGCHKTPDILLYVPVLFRNK-VVRWIDSKAKFGDEYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSFPADVGML 257
            S+++ + +  G  ++ ISER N++P L+AR +++ +L          ++ ++Q++++PS I DE+LR +V  CV  D++ SP +D+++   G EYE  L  +V+             NLG+ F  E++LR+RG  KTPD+ L VP++   K VV WIDSKA FGD+Y+ N ++    + Y+ R+GPGMVIYWFGFI++       D  + +T   P +V  L
Sbjct:    6 SQSYYQSYLMGEDMVSISERVNIAPCLLARIIIQQYLGAGTQPTKQAKQKVSQWIKNPSLIEDEKLRSNVAQCVACDDNYSPLVDKIKHTTGEEYEYILQEKVVHHPRLSTDERQLHNLGISFLGEDELRQRGYPKTPDVKLQVPIIVDEKHVVYWIDSKASFGDDYSYNMNHKEQFAGYISRYGPGMVIYWFGFIQELQRH---DESVFLTTHMPKNVTKL 224          
The following BLAST results are available for this feature:
BLAST of Gchil3240.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVI7_9FLOR4.420e-13371.10CDAN1-interacting nuclease 1 n=1 Tax=Gracilariopsi... [more]
M2X2F4_GALSU1.410e-6240.75CDAN1-interacting nuclease 1 n=1 Tax=Galdieria sul... [more]
A0A3P3YCX7_PLABS1.200e-5139.74CDAN1-interacting nuclease 1 n=1 Tax=Plasmodiophor... [more]
A0A5J4Z6J7_PORPP3.610e-4543.20CDAN1-interacting nuclease 1 n=1 Tax=Porphyridium ... [more]
A0A3M6V6U0_9STRA3.460e-4035.94CDAN1-interacting nuclease 1 n=1 Tax=Peronospora e... [more]
A0A4Y2LKV1_ARAVE6.420e-3934.57CDAN1-interacting nuclease 1 n=1 Tax=Araneus ventr... [more]
A0A7S2SDJ1_9STRA8.270e-3936.78CDAN1-interacting nuclease 1 n=2 Tax=Rhizochromuli... [more]
UPI000A2A67341.060e-3836.29uncharacterized protein C15orf41 homolog n=1 Tax=E... [more]
A0A293M0D6_ORNER4.330e-3834.90CDAN1-interacting nuclease 1 (Fragment) n=1 Tax=Or... [more]
A0A2P6NJE6_9EUKA5.430e-3836.94CDAN1-interacting nuclease 1 n=1 Tax=Planoprotoste... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029404CDAN1-interacting nuclease 1PFAMPF14811TPDcoord: 112..246
e-value: 1.7E-41
score: 141.3
IPR029404CDAN1-interacting nuclease 1PANTHERPTHR31661SIMILAR TO CDNA SEQUENCE BC052040coord: 14..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1212560..1213396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3240.t1Gchil3240.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1212560..1213396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3240.t1 ID=Gchil3240.t1|Name=Gchil3240.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=279bp
MLASEWMRICSLLRCKEDISTLAKAQPDIGYDTISLIYDQLYARQVAKTF
YLVRMHSKAFVEMFKSGLSLMEISERFNLSPSLVARKVLELHLDLNRKSI
TQFMRDPSNITDERLRDDVELCVEMDEHCSPRMDRLRTALGLEYELRLIH
EVMNLGLEFETENDLRKRGCHKTPDILLYVPVLFRNKVVRWIDSKAKFGD
EYTLNKDYVSSVSSYLGRFGPGMVIYWFGFIEDCNSRMLLDNGLLITGSF
PADVGMLPGSNIFLACKEDDEANESEDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029404CDIN1