Gchil3232.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3232.t1
Unique NameGchil3232.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length629
Homology
BLAST of Gchil3232.t1 vs. uniprot
Match: A0A2V3IVL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVL8_9FLOR)

HSP 1 Score: 689 bits (1777), Expect = 2.110e-241
Identity = 325/478 (67.99%), Postives = 390/478 (81.59%), Query Frame = 0
Query:  147 QTYSRGDRKDRGPFSVHIEDQKFYGGLITYIHHLHPARICRVLNPCIRHDGVLVLPKWMQRHDNLLNFHCGQKKLEFSADNTSPPASMNDLDLIGLSLPRPSIPDFVRDFLPNAIVFDLIYGDRDARTSCHSRKGSSCESFPSLNESLNTAIFLPPRLEALEQKHSWVREFVKLMKPPNAGRQAKVLYNYPDADEDN--GMKCFRSAFFTRGPFSKYHIMSDHLQELNFLKSHGISKKARHFQQSAEHGSTNSASCQLNITISNRKLNDDDPKQLIGRYITNIPNIRTEIVKQADRVPGLNVHVAAITLEGKSLWWQINAMQKTDIWVAGHGPLLTNMLFMRQNSTAIEIQPFTYYPQVYERIAQHLAHVNYDRYIANPDEEAFEKCINQVYQSGHSSYNEVRTLHDRYLRAAKKFFQSDSTHSLVLHTLEGRGLDYVRACARMQRLTTNGRNFAIAIVRQARIRCGLPPPRPFESEG 622
            Q  SR + K   PF + IEDQ FYGGLITY H LHPARICRV+N CIR+D  LVLP+WMQRHDNLL+FHCG +KL FS ++ SPP S+ +LDL+GL+ PRPS+PDFVRDF PN +VFDLIYGD + + SCHSRKG+SC+SFPSLN+SLNTAIFLP RLEA+ +K SWVREFVKLMKPPNAG+Q+++LY   D  E    GM+CFRSAFFTRGP++K+H+M+DH++ELNFLKSHGI K+AR  +Q   +     ASC LNITISNRK +D D K LIGRYITNIP +R EI+KQA+R+PGLN+ +  ITLEGKSLWWQINAMQKTD+W+AGHGPLLTNMLF+RQNS+ IE+QPF YYPQ YE +A+HLAHV Y+RYIANPD EAFE CI Q+Y S H SY + +T+ +R+ RA+ KFFQSDSTHSLVLHTL   GLDYV+ACARMQRLTT+   FA+AIVR AR+RCGLP P   E++ 
Sbjct:  134 QNNSRVEDKAVKPFQMRIEDQIFYGGLITYSHMLHPARICRVMNACIRNDDTLVLPRWMQRHDNLLSFHCGHRKLSFSLEDNSPPPSLKNLDLVGLTSPRPSMPDFVRDFAPNTVVFDLIYGDHELKQSCHSRKGTSCDSFPSLNQSLNTAIFLPSRLEAINEKRSWVREFVKLMKPPNAGKQSRILYKNIDVTESKELGMQCFRSAFFTRGPYNKFHVMNDHMRELNFLKSHGIQKEARILRQDKSNDIVEEASCDLNITISNRKADDGDSK-LIGRYITNIPTLRAEILKQAERIPGLNIKLDTITLEGKSLWWQINAMQKTDVWIAGHGPLLTNMLFLRQNSSVIELQPFAYYPQTYENLAEHLAHVRYERYIANPDVEAFETCIRQLYTSDHPSYKDAQTIFERFRRASMKFFQSDSTHSLVLHTLAEEGLDYVKACARMQRLTTDAHVFAVAIVRHARVRCGLPKPSTNEADS 610          
BLAST of Gchil3232.t1 vs. uniprot
Match: R7QSQ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSQ2_CHOCR)

HSP 1 Score: 525 bits (1352), Expect = 2.650e-177
Identity = 249/495 (50.30%), Postives = 342/495 (69.09%), Query Frame = 0
Query:  123 DSASDRNSSVVGEASKPVAVKIESQTYSRGDRKDRGP--FSVHIEDQKFYGGLITYIHHLHPARICRVLNPCIRHDGVLVLPKWMQRHDNLLNFHCGQKKLEFSADNTSPPASMNDLDLIGLSLPRPSIPDFVRDFLPNAIVFDLIYGDRDARTSCHSRKGSSCESFPSLNESLNTAIFLPPRLEALEQKHSWVREFVKLMKPPNAGRQAKVLYNYPDADEDNGMKCFRSAFFTRGPFSKYHIMSDHLQELNFLKSHGISKKARHFQQSAEHGSTNSASCQLNITISNRKLNDDDPKQLIGRYITNIPNIRTEIVKQADRVPGLNVHVAAITLEGKSLWWQINAMQKTDIWVAGHGPLLTNMLFMRQNSTAIEIQPFTYYPQVYERIAQHLAHVNYDRYIANPDEEAFEKCINQVYQSGHSSYNEVRTLHDRYLRAAKKFFQSDSTHSLVLHTLEGRGLDYVRACARMQRLTTNGRNFAIAIVRQARIRCGLPPP 615
            D + D  +++  E ++ ++ + E    + G    + P  F   I+D+K YGGLITY H  HPARICRV+N C+R DG LVLP+WM+R+D  ++FHCG  KLEFS +++ PP  ++  +L+G+   RPS+PDF++DF+ NAIVFDL+YGD     SCHSRKG+ C  FP+L +    A++L  R+E ++ + SWVR+FV+LMKPP++G+ AK+ Y   D +   GM+C+RSA FTRGP++K  +  DHLQ ++FL  H I KKAR     A+  + +   C +N+TISNRKL D    +L+GRYI NIP +R  + +QA R+P L + V+ +TLE +SL W +NAMQKTDIW+AGHGPLLTNM+FMR+NST +EIQPF YYPQ YE++A+HLAHV+YDRYIA+PDEE F+ C+   Y   H S+N+   L  ++  AA K+ QSDSTHS VL       L +V+ CA MQR+ TN  N A A+VR AR+ CGLP P
Sbjct:   87 DESVDNGTNINAERAEQLSGEREPSASAPGQESGKVPLRFFTEIDDKKVYGGLITYSHAFHPARICRVMNACVRPDGTLVLPEWMKRYDTTISFHCGHSKLEFSLEDSFPPQPLDPYELVGIHTSRPSMPDFIKDFMSNAIVFDLVYGDHHVTKSCHSRKGTDCNIFPTLTQDFRPAVYLHSRIEDMDDRVSWVRQFVRLMKPPDSGKHAKITYMEDDNENQEGMQCYRSALFTRGPYNKNFVAKDHLQNMHFLHLHEIEKKARDLVAEAKDRNHH---CSINVTISNRKLVDGTRSRLVGRYILNIPQLRKALSRQARRIPRLQLKVSTMTLESRSLRWHMNAMQKTDIWIAGHGPLLTNMIFMRENSTMMEIQPFGYYPQEYEKMAKHLAHVSYDRYIAHPDEEGFKACMMHFYPEDHRSHNDALALLAKFSAAAAKYAQSDSTHSFVLTHYRDANLRHVKTCALMQRIDTNAGNLATAVVRHARLLCGLPKP 578          
BLAST of Gchil3232.t1 vs. uniprot
Match: A0A1X6NUQ6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUQ6_PORUM)

HSP 1 Score: 107 bits (268), Expect = 8.100e-21
Identity = 102/367 (27.79%), Postives = 160/367 (43.60%), Query Frame = 0
Query:  268 GDRDARTSCHSRKGSSCESFPSLNESLNTAIFLPPRLEALEQKHSWVREFVKLMKPPNAGRQAKVLYNYPDADEDNGMKCFRSAFFTRGPFSKYH------IMSDHLQELNFLKSHGISKKARHFQQSAEHGSTNSASCQLNITISNRKLNDDDPKQL--------IGRYITNIPNIRTEIVKQADRVPGLNV--HVAAITLEGKSLWWQINAMQKTDIWVAGHGPLLTNMLFMRQNSTAIEIQPFTYYPQVYERIAQHLAHVNYDRYIANPDEEAFEKCINQVY--QSGHSSYNEVRTLHDRYLRAAKKFFQS--DSTHSLVLHTLEGRGLDYVRACARMQRLTTNGRNFAIAIVRQARIRCGLPP 614
            G  DA T   SR+G      P +      A   P  + A+      +   V+ M  P+ GR                + CFRSA  T G   K        +  + L +L    ++ + K  R     +        +C+L +T+ NR       KQL         GR+I  + +++  I+ +A   P L++   +     EG +L  Q+  MQ TD+ V  HG  L+N LFMR NS+ +E+ PF YY  V+E +A   A + Y R+IA PD+  F  C+   +   +G S+      L  R+ +AA  F  +   +TH+L LH ++ +   + R CAR Q L  + +  A  +V  A  +C   P
Sbjct:  259 GVEDANTQRQSRRGGWMWRIPEVLRRARRA--RPASVSAV------LDSLVRQMGGPSGGR--------------GQLACFRSA--TVGTIRKRRGHRQKALSDEALNQLILYTANDLVKDPRTPLLGSPTSGGTVPTCKLRVTVLNRVA--PPKKQLAKAKDPFAFGRHIPRVRDVKQAILAEAAADPRLDLTLDIRLRFFEGMTLDEQVAVMQATDVLVGAHGAGLSNALFMRTNSSLVELAPFAYYATVFEELALTQASLRYTRFIAKPDDAQFAACMTHHHPASAGPSAVAMSEELVRRFKKAANGFRDTLGGNTHALQLH-VDSKADFWARVCARSQSLRVDEKQLAKVVVEAAVAQCLAAP 598          
BLAST of Gchil3232.t1 vs. uniprot
Match: A0A5J4ZAV2_PORPP (Cytidine deaminase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAV2_PORPP)

HSP 1 Score: 66.2 bits (160), Expect = 1.470e-7
Identity = 81/362 (22.38%), Postives = 139/362 (38.40%), Query Frame = 0
Query:  246 RPSIPDFVRDFLPNAIVFDLIYGDRDART---SCHSRKGSSCESFPSLNESLNTAIFLPPRLEALEQKHSWVREFVKLMKPPNAGRQAKVLYNYPDADEDNGMKCFRSAFFTRGPFSKYHIMSDHLQELNFLKSHGISKKARHFQQSAEHGSTNSASCQLNITISNRKLNDDDPKQLI-----GRYITNIPNIRTEIVKQADRVPGLNVHVAAITLEGKSLWWQINAMQKTDIWVAGHGPLLTNMLFMRQNSTAIEIQPFTYYPQVYERIAQHLAHVNYDRYI---ANPDEEAFEKCINQVYQSGHSSYNEVRTLHDRYLRAAKKFFQSDS----THSLVLHTLEGRGLDYVRACARMQRLT 592
            R  +P F++DF+P  ++ + +    +  T    C +  G  C   P     L  AIFL     + +   SWVR F++   P   G  A     Y  + ++       +      P     +     +     +S+G+S + R               C   + I NR      P         GR +       + +++ A     + + V     E  +   Q++AMQ+TD  V GHG   TN +F+R N   +EI PF Y P ++E++ + +      RY    A PD  +  +C+  +  +        +    ++   A+K+  S S        V  T++G      R C R Q+LT
Sbjct:  601 RHHMPHFMQDFIPVLMLLEPLLDAMEGSTVSYRCITPTGGDCVRIP-----LRPAIFLDDGARS-QGPLSWVRRFLQNSPPAEFGVAAV----YVSSRKELQRPAIGARSILTFPRKTLDVFGAISKSGRVFRSNGLSAEPR-------------KQCPAIVRIVNR------PPAFYRYRKGGRNLNQTAEWNSTLLELAQH-QSIAMEVQETFFEDLTYEEQLHAMQETDFLVIGHGAAATNAIFVRDNVPVLEIFPFLYQPNLFEKMVKQVG--TESRYFLMDAEPDLRSVRECLRMMGTTDVGMKTRQQDFVAKFASIAEKYAVSPSRTINNDKAVDWTVDGS-----RMCVRSQQLT 925          
The following BLAST results are available for this feature:
BLAST of Gchil3232.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IVL8_9FLOR2.110e-24167.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSQ2_CHOCR2.650e-17750.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NUQ6_PORUM8.100e-2127.79Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4ZAV2_PORPP1.470e-722.38Cytidine deaminase n=1 Tax=Porphyridium purpureum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..628
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1189496..1191382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3232.t1Gchil3232.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1189496..1191382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3232.t1 ID=Gchil3232.t1|Name=Gchil3232.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=629bp
MFTIVNKPHFVHVCLLLYILILSPTLFPTHVTAGTVRSKPISSRNGNSPT
DNMKRMLADEAKKKKYYTTPLAIDELDSLKMVENATNSAPRNISSESSIS
VNSFERSKQERNGSIYQKQDREDSASDRNSSVVGEASKPVAVKIESQTYS
RGDRKDRGPFSVHIEDQKFYGGLITYIHHLHPARICRVLNPCIRHDGVLV
LPKWMQRHDNLLNFHCGQKKLEFSADNTSPPASMNDLDLIGLSLPRPSIP
DFVRDFLPNAIVFDLIYGDRDARTSCHSRKGSSCESFPSLNESLNTAIFL
PPRLEALEQKHSWVREFVKLMKPPNAGRQAKVLYNYPDADEDNGMKCFRS
AFFTRGPFSKYHIMSDHLQELNFLKSHGISKKARHFQQSAEHGSTNSASC
QLNITISNRKLNDDDPKQLIGRYITNIPNIRTEIVKQADRVPGLNVHVAA
ITLEGKSLWWQINAMQKTDIWVAGHGPLLTNMLFMRQNSTAIEIQPFTYY
PQVYERIAQHLAHVNYDRYIANPDEEAFEKCINQVYQSGHSSYNEVRTLH
DRYLRAAKKFFQSDSTHSLVLHTLEGRGLDYVRACARMQRLTTNGRNFAI
AIVRQARIRCGLPPPRPFESEGEVNLTI*
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