Gchil3218.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3218.t1
Unique NameGchil3218.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length176
Homology
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A2V3IXE9_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXE9_9FLOR)

HSP 1 Score: 237 bits (604), Expect = 2.440e-77
Identity = 115/171 (67.25%), Postives = 137/171 (80.12%), Query Frame = 0
Query:    1 MMSAFSISTPLRLSPTVLPPHSKCHRRPLQLSVATPPPPLRPSDKSSS-HEHASPAQPLVGAESLQRALLTTPPGKLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGPFGVKRLVEHLEKQSQSG 170
            M  AF+  T LR++         CHRRPL+ SVATPPPPLRPSDKSSS HEHASPA P++GAE+LQR L T P  K V VMFHARWCRVCKTL+ KL+RV ++FP+++WL+VDFAE+PNK LS+QLGV+LLPTFRFY P ANIDDA+DHFT+GPFG KRL+E LE Q  +G
Sbjct:    1 MQPAFTSPTSLRIASVSQTCIQTCHRRPLRASVATPPPPLRPSDKSSSPHEHASPALPVIGAEALQRELNTVPADKFVVVMFHARWCRVCKTLSSKLYRVTQRFPNILWLAVDFAEVPNKQLSSQLGVRLLPTFRFYQPGANIDDALDHFTSGPFGAKRLIERLEDQRSAG 171          
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A2V3IXB2_9FLOR (Thioredoxin-like 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXB2_9FLOR)

HSP 1 Score: 236 bits (603), Expect = 3.140e-77
Identity = 115/169 (68.05%), Postives = 134/169 (79.29%), Query Frame = 0
Query:    1 MMSAFSISTPLRLSPTVLPPHSKCHRRPLQLSVATPPPPLRPSDKSSSHEHASPAQPLVGAESLQRALLTTPPGKLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGPFGVKRLVEHLEKQSQS 169
            M  AF+  +PLR   +  P    CHRRP QLS+A+PPPPLRPSDK    EHASPA+PL+GA++L+ AL   P  KLV VMFHARWCRVC+TL+ KL RVAE FP+V+W SVDFAELPNKPL A+L VKLLPTFRFY P+A+ID+A+DHFTTGPFG KRLVEHLEKQ  S
Sbjct:    1 MQPAFTNPSPLRNVTSFGPLSPTCHRRPPQLSIASPPPPLRPSDKGLPQEHASPAEPLMGADALRTALNAAPTDKLVVVMFHARWCRVCRTLSSKLFRVAEDFPNVVWFSVDFAELPNKPLCARLNVKLLPTFRFYKPKADIDEALDHFTTGPFGAKRLVEHLEKQRSS 169          
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A843W776_COLES (Thioredoxin domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843W776_COLES)

HSP 1 Score: 71.2 bits (173), Expect = 6.380e-12
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0
Query:   75 KLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGPFGVKRLVEHLEKQS 167
            KLV   F+  WC  C+ L PKL R+AE+ PDV++L V+F +  NKP+  +L V++LP F FY      D  ++ F+      K+L E + K S
Sbjct:  105 KLVVADFYGTWCASCRALYPKLCRIAEENPDVVFLKVNFDK--NKPMCKRLNVRVLPYFHFYR---GADGLLESFSCSLAKFKKLKEAIAKHS 192          
BLAST of Gchil3218.t1 vs. uniprot
Match: A4S468_OSTLU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S468_OSTLU)

HSP 1 Score: 68.6 bits (166), Expect = 1.220e-11
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   75 KLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGPFGVKRLVEHLEKQS 167
            KLV V  +ARWC  C+ L PKL ++A ++PDV+++ V+F    NK L   LGVK+LP F+FY      +  V  F+     +K L   L + S
Sbjct:   50 KLVVVDVYARWCGACRALYPKLCKIAAEYPDVVFVKVNFDA--NKDLCKSLGVKVLPYFKFYR---GTEGCVAQFSASIAKIKILRAALNEHS 137          
BLAST of Gchil3218.t1 vs. uniprot
Match: A4RQI8_OSTLU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RQI8_OSTLU)

HSP 1 Score: 67.4 bits (163), Expect = 1.390e-11
Identity = 29/82 (35.37%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   67 ALLTTPPGKLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDH 148
            AL+  P  K V V F A WC  C+ +AP++ ++ +Q+PDV++   D A     PLS +LG++ +PTF+FY     +++ + +
Sbjct:   12 ALIAGP--KPVVVDFMASWCGKCRQIAPEVDKLIDQYPDVVFAKFDTAHADLAPLSKELGIEAMPTFKFYKDGKEVNEVIGY 91          
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A090MBN3_OSTTA (Thioredoxin, conserved site n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090MBN3_OSTTA)

HSP 1 Score: 69.7 bits (169), Expect = 1.570e-11
Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   68 LLTTPPGKLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGPFGVKRLVEHLEKQS 167
            LL     KL+ V  +ARWC  C+ L PKL ++A ++P+V+++ V+F +  NK L   LGVK+LP F+FY      D  V  F+     +K L   L++ S
Sbjct:   66 LLNVHSDKLIVVDVYARWCGACRALYPKLCKLAREYPEVVFVKVNFDD--NKLLCKSLGVKVLPYFKFYRGS---DGCVAAFSASIAKIKLLRAALDEHS 160          
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A1X6NXU9_PORUM (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXU9_PORUM)

HSP 1 Score: 70.1 bits (170), Expect = 2.030e-11
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   68 LLTTPPGKLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGP 153
            +L    G +  + F+A WCR C+ +APK+ R+A +FP++ +  +D+    NK L  +LGVK LPTF FY+  A     V+ F  GP
Sbjct:   99 MLQASSGGVAVLKFYAPWCRSCRAIAPKVARLAHEFPEIRFYEIDYEA--NKELCWRLGVKNLPTFHFYSGAAG---RVEDFNAGP 179          
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A1X2HGA5_SYNRA (Thioredoxin n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HGA5_SYNRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.220e-11
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 0
Query:   75 KLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAV 146
            KLV V F+A WC  CK +APKL ++AE +PDVI+  VD  E  +  ++ ++GV+ +PTF +Y     + + V
Sbjct:   21 KLVLVDFYATWCGPCKLIAPKLEKLAEAYPDVIFAKVDVDEAAD--IAGEVGVRAMPTFMYYKAGEKVGEVV 90          
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A022Q005_ERYGU (Thioredoxin domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q005_ERYGU)

HSP 1 Score: 69.3 bits (168), Expect = 2.330e-11
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   75 KLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGPFGVKRLVEHLEKQSQS 169
            +LV V F   WC  C+ L PK+ R+AEQ P++I+L V+F E  NKPL   L +K+LP F FY      D  +D F+     +++L + +   +++
Sbjct:  103 RLVIVEFFGAWCASCRALFPKICRIAEQHPEIIFLKVNFDE--NKPLCKSLNIKVLPYFHFYRGS---DGLLDSFSCSLAKLQKLKDAIAAHNKA 192          
BLAST of Gchil3218.t1 vs. uniprot
Match: A0A7S0KQK5_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KQK5_9CHLO)

HSP 1 Score: 68.9 bits (167), Expect = 3.470e-11
Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 0
Query:   68 LLTTPPGKLVAVMFHARWCRVCKTLAPKLHRVAEQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFTTGPFGVK----RLVEH 162
            LL      LV V  +ARWC  C+ L PKL ++A+++PDVI++ V+F    NK L   LGVK+LP F+FY      +  V  F+     +K     LVEH
Sbjct:   71 LLNEHADALVVVDVYARWCGACRALYPKLSKIAKEYPDVIFVKVNFDA--NKELCRSLGVKVLPYFKFYRGN---EGCVAQFSASIAKIKLLRSALVEH 164          
The following BLAST results are available for this feature:
BLAST of Gchil3218.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXE9_9FLOR2.440e-7767.25Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracil... [more]
A0A2V3IXB2_9FLOR3.140e-7768.05Thioredoxin-like 2, chloroplastic n=1 Tax=Gracilar... [more]
A0A843W776_COLES6.380e-1239.78Thioredoxin domain-containing protein n=1 Tax=Colo... [more]
A4S468_OSTLU1.220e-1139.78Thioredoxin domain-containing protein (Fragment) n... [more]
A4RQI8_OSTLU1.390e-1135.37Thioredoxin domain-containing protein (Fragment) n... [more]
A0A090MBN3_OSTTA1.570e-1138.00Thioredoxin, conserved site n=2 Tax=Ostreococcus t... [more]
A0A1X6NXU9_PORUM2.030e-1139.53Thioredoxin domain-containing protein n=1 Tax=Porp... [more]
A0A1X2HGA5_SYNRA2.220e-1141.67Thioredoxin n=1 Tax=Syncephalastrum racemosum TaxI... [more]
A0A022Q005_ERYGU2.330e-1136.84Thioredoxin domain-containing protein n=1 Tax=Eryt... [more]
A0A7S0KQK5_9CHLO3.470e-1140.40Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 47..174
e-value: 3.4E-17
score: 64.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..57
NoneNo IPR availablePANTHERPTHR43601THIOREDOXIN, MITOCHONDRIALcoord: 59..169
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 59..169
NoneNo IPR availableCDDcd02947TRX_familycoord: 74..136
e-value: 3.23729E-17
score: 70.6648
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 74..146
e-value: 2.4E-12
score: 46.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 31..168
score: 12.733473
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 56..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1049148..1049675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3218.t1Gchil3218.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1049148..1049675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3218.t1 ID=Gchil3218.t1|Name=Gchil3218.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=176bp
MMSAFSISTPLRLSPTVLPPHSKCHRRPLQLSVATPPPPLRPSDKSSSHE
HASPAQPLVGAESLQRALLTTPPGKLVAVMFHARWCRVCKTLAPKLHRVA
EQFPDVIWLSVDFAELPNKPLSAQLGVKLLPTFRFYNPQANIDDAVDHFT
TGPFGVKRLVEHLEKQSQSGVTESS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf