Gchil3093.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3093.t1
Unique NameGchil3093.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length757
Homology
BLAST of Gchil3093.t1 vs. uniprot
Match: A0A2V3IVB2_9FLOR (Bromodomain-containing protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVB2_9FLOR)

HSP 1 Score: 417 bits (1071), Expect = 3.620e-131
Identity = 301/792 (38.01%), Postives = 437/792 (55.18%), Query Frame = 0
Query:    1 MSSSSQTPTQXXXXIFAQLMATGAIDRFRKSLEKLIQPLSQARHQSISNATKSFLHGLVSVEDIISNPKKLLQHAKDATMTSAREDVVKDVQQTAVSEAAVELRRTLRKAFDAIIEPPKEQPKPEPQSTRITQPQKQATNKAPPEIGKALSP--PNGQLPNPNGGQENSSEALDQTPSPLRGKAQANDQSAQRSTQGSQNSEFANGINAFKPSASGK-TPPKTKPISSIQTIPTDLFQTAHNILELKSK-KKEGDSSLAEKENRKNEPTETQAASLELSSPKPN-------TLQCLASQDRPASESPKNPPEAPSRAVDFPYSEDGLLKEDKKEAVEGEN---SHVESVDKSCSPMPQTSSANELGHACETAKMRRRSQEVAD-------------DPKRKARGGGMSEKDP-------DAETPRSSKKRVRKPRKSSDMPVADEIPTPKRRRKSQAQLDSNIEVEEGSKASRKRGRREIESDLSGRPRKAHKKSPIAASKGSERITEKRTGRKRGKGYKPVLNPAVAVLIDPQNPNRPRRYGMSNPSCVPKDYEAQVQVLEILENLLENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGSFDPVVEDMARCRVKLSLSFECL---AIGCDTATIQQGRSQTQEKNNGVKGKARAERSKHPEAASKTAREEKVKNDSENPRDLNNGRLLGKQGVIFRYVENEDGKKRKEWSPCTITEYDAASRSYTILWEDK-TETRNATIGPGCIFNIHRFR 754
            MS+S Q P      IF QLMA GAIDRFRKSLEKL+ PLS+ARHQS+S AT SFLH L S    + +PK LLQ A+ ATM S RE V+ DVQ+ AVS  A +LR +LR+AFD I+ P +++P  E    R+T+P     +  P E  K  S   P+     P+  +  +S+   Q P+ +  K+Q+  QS        +  +   GIN     +S + +  + +  + +Q+IPTDLFQTAH IL+ K K +KEG +S  + E   NE  +   + +       N        ++   +  R  ++  K   E  S A      ++ L  ++   A + +    +H ES+ +      QT + N        A  +  +++  D             D K  +R   M +K         D++  R SKK  R  RK+   P   +    KRR+KS+   + N E EE   +  +R   E   +   +PR+   ++  +  K  E++TEK T +KR K  +     +++ L+DP+NPNRPR Y ++ P CVP+DY+ Q++VL++LENLLE + A  F+EPVD G+EG S+YL+ I NPMDLGTIV RLKEG+ + G+F+TV EV+ADIELVWWNC  FNG+FDPVV DM RC+++LSL FE      + C     Q+   +T+ +  G   +  +      + +  T+  E+         DLN+G+LLGK G+IFRYV   D   RK WS C++ +Y+A++RSYTI W+D  + T NAT+GPGC+FNIHRFR
Sbjct:    1 MSTSPQQPPSSPSQIFDQLMANGAIDRFRKSLEKLMFPLSKARHQSVSKATHSFLHNLPSSSTSLPDPKLLLQQAQHATMGSVREAVINDVQRIAVSAQAADLRNSLRRAFDQIVHPRRDRPVGE---KRVTEP----CDSMPNEQNKTTSAITPSHSAKLPDVDRPVASDT--QVPASVEQKSQSK-QSKLSPLPPPRQQKVPLGINPSNSESSAQQSKEQRREPADMQSIPTDLFQTAHRILQSKEKAQKEGLASAHQGE--ANETPQIDKSEVRSEGEHENESVHSKLVVEQEQTSKRERTKQDKGLMEYKSGAGARKEEQENLGNQNHSSAEKDQQKFENHNESITEG-----QTRNVNYNTRLSSKATKKYGAKKSVDEKQTRALEHDTEKDSKHPSRADDMVKKLDTKSSQVIDSKDERGSKKEGRGRRKAQSKPAELDTTIKKRRKKSRRGDNDNFEAEEAPGSKPERYEPESAGNTEKKPRRKQGRNTASRKKNVEQVTEKATPKKRAKPVEETHTSSLSPLVDPRNPNRPRGYRVTAPFCVPEDYDEQLKVLQVLENLLEKEFADPFSEPVDPGEEGCSAYLREIANPMDLGTIVKRLKEGSEERGYFKTVQEVIADIELVWWNCTAFNGAFDPVVFDMDRCKLELSLQFEQFEQFGVTCKQPRKQRRTPKTRNRYRGYSAEKESTEVGVLKNSVSTSDGEQRNQFPPPESDLNDGQLLGKHGLIFRYVAIAD-VGRKVWSSCSVADYNASNRSYTIKWDDDGSTTENATLGPGCMFNIHRFR 774          
BLAST of Gchil3093.t1 vs. uniprot
Match: R7QC78_CHOCR (Bromo domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC78_CHOCR)

HSP 1 Score: 147 bits (372), Expect = 4.710e-33
Identity = 103/294 (35.03%), Postives = 146/294 (49.66%), Query Frame = 0
Query:  473 TEKRTGRKRGKGYKPVLNPAVAVLIDP------QNPN-----RPRRYGMSNPSCVPKDYEAQVQVLEILENLLENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGSFDPVVEDMARCRVKLSLSFECLAI--GCDTATIQQGRSQTQEKNNGVKGKARAERSKHPEAASKTAREEKVKNDSENPRDLNNGRLLGKQGVIFRYVENEDGKKRKEWSPCTITEYDAASRSYTILW-EDKTETRNATIGPGCIFNIHR 752
            TEK  G++  K  K       +    P      QNP+     RPR +  S+  CVP+D E Q  +L  L  L+E D A  F EPVD  ++G ++Y  VIK  MDLGTI  RL + TSQ  ++    ++ ADIELVW NC QFNG FDP++ D+ +C   L  + E   +  G +    Q+ RS+++      +     ER K  +   K A   K K D     DLN+GRL+GK   +F        +K K W+   + ++   S+SY + W +D   T NAT G    F + R
Sbjct:  564 TEKSQGKENFKSGKSTKRKRRSEADKPTAEEPDQNPSGSPKKRPRIHN-SDTRCVPQDLEEQKNILRALRELMEKDYAEVFLEPVDPSEKGCAAYYTVIKKAMDLGTIEKRLDQATSQNAYYAAKTDIFADIELVWSNCRQFNGMFDPIIGDVEKCMAFLDAALEKYGVESGANKDN-QRRRSRSRSLKRKFEDSQLTERPKKQQXXRKKA---KPKAD-----DLNDGRLVGKVVAVFT---RRGPRKAKAWTRVKVVDFLERSQSYKLQWLDDGKITYNATFGMNETFPVFR 844          
BLAST of Gchil3093.t1 vs. uniprot
Match: W6KVQ6_9TRYP (Bromo domain-containing protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KVQ6_9TRYP)

HSP 1 Score: 72.8 bits (177), Expect = 1.010e-10
Identity = 32/87 (36.78%), Postives = 53/87 (60.92%), Query Frame = 0
Query:  535 ENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGSFDPVVEDMARCRVKL 621
            E   + +F EPV+  + G  +Y QV++ P+ L  +++R+ EG     ++ T  +VL DIEL+W NCA+FNG   P++E+  +C   L
Sbjct:   62 EESSSLNFREPVNALETGAFNYYQVVEQPLSLREVLDRMAEGN----YYSTAEQVLQDIELIWTNCAKFNGPTSPLMEEAKKCAAAL 144          
BLAST of Gchil3093.t1 vs. uniprot
Match: A0A061JB42_TRYRA (Bromo domain-containing protein n=2 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A061JB42_TRYRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.310e-10
Identity = 49/154 (31.82%), Postives = 77/154 (50.00%), Query Frame = 0
Query:  477 TGRKRGKGYKPVLNPAVAVLIDPQNPNRPRRYGMSNPSCVPKDYEAQVQVLEILENLLENDCASS-FAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGSFDPVVEDMARCRVKLSLSFECLA 629
            TGRK        +      L  P+   + +    S+ S VP+  +    + + L  L   + AS+ F EPV   D G  +Y +V+K PM L T+++R+ EG    GH+   ++VLAD+E +W NC +FNG    +  D  +C+  L+   E LA
Sbjct:    4 TGRKAVDEINHWIAYIDCALSHPRPLPKGKHIFRSDLSTVPEVRD----IYDCLYKLYTEEIASAPFREPVHALDLGVFNYYEVVKEPMSLRTVLDRIAEG----GHYSQASQVLADVEKIWSNCEKFNGVDSALAADAKKCQGVLTKLRERLA 149          
BLAST of Gchil3093.t1 vs. uniprot
Match: A0A5J4XNE0_9CHLO (Bromo domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XNE0_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 3.680e-10
Identity = 41/120 (34.17%), Postives = 66/120 (55.00%), Query Frame = 0
Query:  493 VAVLIDPQNPNRPRRYGMSNPSCVPKDYEAQVQVLEILENLLENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGSFDPVVE 612
            V   + P+ PN+  R G  +    P + +A  + L++++ LLE + A  FAEPVD    G  +Y Q+I+ PMDLGTI + L    ++   +    +VL D++ VW NC  +N   D +V+
Sbjct:  158 VGPGMGPKGPNK--RKGGRSKKAPPNESQAMQRCLDVVDQLLEEEDAEPFAEPVDAKALGLHNYHQIIRRPMDLGTIKDNLM---AEPPSYVCSADVLRDVQQVWANCRTYNDEDDAIVD 272          
BLAST of Gchil3093.t1 vs. uniprot
Match: A0A2P6TME4_CHLSO (DNA-binding bromodomain-containing n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TME4_CHLSO)

HSP 1 Score: 73.9 bits (180), Expect = 8.800e-10
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 0
Query:  486 KPVLNPAVAVLIDPQNPNRPRRYGMSNPSCVPKDYEAQVQVLEILENLLENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQ---LGHFRTVNEVLADIELVWWNCAQFNGSFDPV 610
            +P L   +   +      RP   G + P    +      + L +LE LL+++ A  F++PVD    G   Y QVI +PMDLGTI  +L  G ++   +  +++ +EVLAD++LVW NC ++N +  P+
Sbjct:  509 RPALAAQMGAAVKEAAAARPGA-GTAGPDSELRRGHPLSRCLVVLERLLQHEDAEPFSQPVDPEALGIPDYPQVITSPMDLGTIRGKLAPGHTEGWGMVAYKSTDEVLADVQLVWTNCRRYNAAGSPI 635          
BLAST of Gchil3093.t1 vs. uniprot
Match: C4M1L3_ENTHI (Bromodomain protein, putative n=8 Tax=Entamoeba TaxID=5758 RepID=C4M1L3_ENTHI)

HSP 1 Score: 72.0 bits (175), Expect = 1.280e-9
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 0
Query:  528 EILENLLENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNG 605
            ++L +LL N  + +F EPVD    G  +Y  +IK+PMDLGTI N+LK+ T     ++ VNEVL+DI+LVW N  ++N 
Sbjct:  295 KLLSSLLRNKASFAFKEPVDPQLTGAINYFDIIKHPMDLGTIKNKLKDKT-----YKNVNEVLSDIDLVWNNAFKYNA 367          
BLAST of Gchil3093.t1 vs. uniprot
Match: A0D5S1_PARTE (Bromo domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0D5S1_PARTE)

HSP 1 Score: 68.9 bits (167), Expect = 1.970e-9
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0
Query:  510 MSNPSCVPKDYEAQVQVLEILENLLENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGS 606
            M   +  P + E Q ++ +I++ LL+++ +  F +PVD        Y+ ++K PMDLGT+  +L   T     ++TV E L DI+L+W NC  +NGS
Sbjct:    1 MMKTTQTPLNKEEQRRLNQIVQQLLDSNDSVEFRQPVDYKALNLHDYITIVKKPMDLGTVQRKLNSNT-----YKTVEECLDDIQLIWDNCKLYNGS 92          
BLAST of Gchil3093.t1 vs. uniprot
Match: A0A7I4FPW2_PHYPA (Bromo domain-containing protein n=9 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4FPW2_PHYPA)

HSP 1 Score: 72.0 bits (175), Expect = 2.680e-9
Identity = 71/250 (28.40%), Postives = 109/250 (43.60%), Query Frame = 0
Query:  420 KSQAQLDSNIEVEEGSKASRKRGRREIESDLSGRPRKAHKKSPIAASKGSERITEKRTGRKRGKGYKPVL--NPAVAVLIDPQNPNRP-------------------RRYGMSNPSCVPKDYEAQVQ---------------VLEILENLLENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGSFDPVVEDMARCRVKLSLSFE--CLAIG 631
            KS  + D ++  +EG  +  K  +R   S L  RP K  +  PI++SK      E+++     K  + VL  N A+      +  NR                    ++   S P+ V KD E                   VL  L+ +++   A  F +PVD    G   Y +V+K PMDLGTI +RL++G      + TV++V  D+ LVW NC  +N   DP++E +      L  +F+  CLA G
Sbjct:  133 KSGTENDESV-TDEGVNSKEKVEKRRGSSRLRIRPSKFRESLPISSSKVKG---EEKSNEDSAKSIEVVLPVNAAIPSTAKSKENNRSTAGSSEVNTRELIARIFSKKKENKSTPTAV-KDKELSTTAPVVPTIPDTVGLKAVLSALKRIMKMKEAGPFNKPVDPVKLGIPDYFEVVKRPMDLGTIRDRLEKGEV----YNTVDDVFEDVALVWSNCRTYNDDGDPIMEFLKN----LESTFQKLCLAAG 369          
BLAST of Gchil3093.t1 vs. uniprot
Match: S9U4M1_9TRYP (Bromo domain-containing protein n=1 Tax=Strigomonas culicis TaxID=28005 RepID=S9U4M1_9TRYP)

HSP 1 Score: 68.2 bits (165), Expect = 3.540e-9
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0
Query:  535 ENDCASSFAEPVDLGDEGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNCAQFNGSFDPVVEDMAR 616
            E+ C+ +F EPV+    G   Y  VI  PM L T+++R+  G    GH+ T  +VL D++L+W NCA+FNG  D V+   AR
Sbjct:   58 EHSCSVNFREPVNALQLGALHYYDVITEPMSLRTVLDRIAAG----GHYTTTAQVLRDVDLIWSNCAKFNGG-DSVITAEAR 134          
The following BLAST results are available for this feature:
BLAST of Gchil3093.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVB2_9FLOR3.620e-13138.01Bromodomain-containing protein 4 n=1 Tax=Gracilari... [more]
R7QC78_CHOCR4.710e-3335.03Bromo domain-containing protein n=1 Tax=Chondrus c... [more]
W6KVQ6_9TRYP1.010e-1036.78Bromo domain-containing protein n=1 Tax=Phytomonas... [more]
A0A061JB42_TRYRA1.310e-1031.82Bromo domain-containing protein n=2 Tax=Trypanosom... [more]
A0A5J4XNE0_9CHLO3.680e-1034.17Bromo domain-containing protein n=1 Tax=Trebouxia ... [more]
A0A2P6TME4_CHLSO8.800e-1032.81DNA-binding bromodomain-containing n=1 Tax=Chlorel... [more]
C4M1L3_ENTHI1.280e-946.15Bromodomain protein, putative n=8 Tax=Entamoeba Ta... [more]
A0D5S1_PARTE1.970e-935.05Bromo domain-containing protein n=2 Tax=Paramecium... [more]
A0A7I4FPW2_PHYPA2.680e-928.40Bromo domain-containing protein n=9 Tax=Physcomitr... [more]
S9U4M1_9TRYP3.540e-941.46Bromo domain-containing protein n=1 Tax=Strigomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainSMARTSM00297bromo_6coord: 516..631
e-value: 1.5E-8
score: 44.4
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 527..614
e-value: 5.0E-15
score: 55.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 534..611
score: 13.5062
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 515..627
e-value: 2.1E-20
score: 74.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 507..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 641..686
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..456
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 430..676
NoneNo IPR availableCDDcd04369Bromodomaincoord: 523..613
e-value: 7.97492E-18
score: 77.4126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:48150..50420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3093.t1Gchil3093.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 48150..50420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3093.t1 ID=Gchil3093.t1|Name=Gchil3093.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=757bp
MSSSSQTPTQTPTQIFAQLMATGAIDRFRKSLEKLIQPLSQARHQSISNA
TKSFLHGLVSVEDIISNPKKLLQHAKDATMTSAREDVVKDVQQTAVSEAA
VELRRTLRKAFDAIIEPPKEQPKPEPQSTRITQPQKQATNKAPPEIGKAL
SPPNGQLPNPNGGQENSSEALDQTPSPLRGKAQANDQSAQRSTQGSQNSE
FANGINAFKPSASGKTPPKTKPISSIQTIPTDLFQTAHNILELKSKKKEG
DSSLAEKENRKNEPTETQAASLELSSPKPNTLQCLASQDRPASESPKNPP
EAPSRAVDFPYSEDGLLKEDKKEAVEGENSHVESVDKSCSPMPQTSSANE
LGHACETAKMRRRSQEVADDPKRKARGGGMSEKDPDAETPRSSKKRVRKP
RKSSDMPVADEIPTPKRRRKSQAQLDSNIEVEEGSKASRKRGRREIESDL
SGRPRKAHKKSPIAASKGSERITEKRTGRKRGKGYKPVLNPAVAVLIDPQ
NPNRPRRYGMSNPSCVPKDYEAQVQVLEILENLLENDCASSFAEPVDLGD
EGQSSYLQVIKNPMDLGTIVNRLKEGTSQLGHFRTVNEVLADIELVWWNC
AQFNGSFDPVVEDMARCRVKLSLSFECLAIGCDTATIQQGRSQTQEKNNG
VKGKARAERSKHPEAASKTAREEKVKNDSENPRDLNNGRLLGKQGVIFRY
VENEDGKKRKEWSPCTITEYDAASRSYTILWEDKTETRNATIGPGCIFNI
HRFRAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf