Gchil3032.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3032.t1
Unique NameGchil3032.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length238
Homology
BLAST of Gchil3032.t1 vs. uniprot
Match: A0A2V3IGI9_9FLOR (Membrin-12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI9_9FLOR)

HSP 1 Score: 226 bits (575), Expect = 5.440e-71
Identity = 130/237 (54.85%), Postives = 178/237 (75.11%), Query Frame = 0
Query:    1 MDDAYRDTRRVLLEARNQLETLEAACANAQLDPQASAVVATAFRHNLARLTDHSARLRTLVPAQAATTTTRRMWDARVKDLDDQIGELRAGDARCTRRFRCIRSDYMLRDELFQRRGAGVGHMGXXXXXXXXXDAVLRLGMVEEKRALKQSGTMLSGVVNTGASTLEQLIAQRGRLNKVKNNVVGVMKQVGVDGRLIASIERRQFSDTVVLYSLMVVMVLLLALAVLYKYQRHKHSG 237
            ++ AYR+ RRV+++ARNQLETLEAA AN QLDPQASA V++AF  N+A L   +++LR+++ ++  +   R++W AR++DLDDQI E RAG ARCT R R IR++  +RDELFQRR        XXXXXXX  DAVLR+GMVEE R L  S    S ++NTG   LE+L+ Q+GRL  +K  ++ VM Q+GVD R+IASIERR++SDT+++Y+LMV+M++LLALAVL+KY R + +G
Sbjct:    4 IESAYREARRVIMDARNQLETLEAASANTQLDPQASAPVSSAFSENVAVLAAKASQLRSMLLSEPPSR--RQVWKARLRDLDDQIAEFRAGHARCTARLRHIRNERDMRDELFQRRAGAQXXXXXXXXXXXRGDAVLRVGMVEEARVLDDSTGTASAILNTGRGALEKLLFQKGRLRSMKKRMLDVMNQIGVDRRIIASIERREYSDTLLVYALMVLMLVLLALAVLWKYHRKREAG 238          
BLAST of Gchil3032.t1 vs. uniprot
Match: A0A5J4YZX6_PORPP (Golgi SNAP receptor complex member 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZX6_PORPP)

HSP 1 Score: 82.4 bits (202), Expect = 1.520e-15
Identity = 64/232 (27.59%), Postives = 114/232 (49.14%), Query Frame = 0
Query:    1 MDDAYRDTRRVLLEARNQLETLEAACANAQLDPQASAVVATAFRHNLARLTDHSARLRTLVPAQAATTTTRRMWDARVKDLDDQIGELRAGDARCTRRFRCIRSDYMLRDELFQRRGAGVGHMGXXXXXXXXXDAVLRLGMVE---EKRALKQSGTMLSGVVNTGASTLEQLIAQRGRLNKVKNNVVGVMKQVGVDGRLIASIERRQFSDTVVLYSLMVVMVLLLALAVLYK 229
            M+D +R  RR++++AR++L TLE A  ++Q + Q            +A L   S +   +V  +   T  R  W  R+  LD++I E++   A   R+      +  +R +L + R +  G            DA + +G +    E ++L QS +M+  ++ TG S LEQL  QR  L   K  ++ V  ++GV   +I  IE+++    +++Y  M ++ LLL L  ++K
Sbjct:    1 MEDGFRVGRRLIVDARSKLNTLEYASGDSQTELQLG------LEQVVAALEAQSLQAHGMVTHEP--TNKREYWRLRLAQLDEEIAEVKRAHAAIMRKRHIQVREEQMRTDLLRERISATG------------DASIPIGSLSFEHETQSLNQSSSMVDDILRTGRSALEQLQVQRVSLKGTKTKMLDVANKIGVGKDIIRMIEKKENETALIVYGGMFILTLLLLLLFIWK 212          
The following BLAST results are available for this feature:
BLAST of Gchil3032.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IGI9_9FLOR5.440e-7154.85Membrin-12 n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
A0A5J4YZX6_PORPP1.520e-1527.59Golgi SNAP receptor complex member 2 n=1 Tax=Porph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..32
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 144..203
e-value: 2.3E-8
score: 34.2
NoneNo IPR availablePANTHERPTHR21230:SF1GOLGI SNAP RECEPTOR COMPLEX MEMBER 2coord: 3..229
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 3..229
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..228
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..237
NoneNo IPR availableTMHMMTMhelixcoord: 209..228
IPR027027GOSR2/Membrin/Bos1PIRSFPIRSF028865Membrin-2coord: 1..232
e-value: 8.9E-26
score: 89.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:1204521..1205234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3032.t1Gchil3032.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 1204521..1205234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3032.t1 ID=Gchil3032.t1|Name=Gchil3032.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=238bp
MDDAYRDTRRVLLEARNQLETLEAACANAQLDPQASAVVATAFRHNLARL
TDHSARLRTLVPAQAATTTTRRMWDARVKDLDDQIGELRAGDARCTRRFR
CIRSDYMLRDELFQRRGAGVGHMGQTGQTGQTGDAVLRLGMVEEKRALKQ
SGTMLSGVVNTGASTLEQLIAQRGRLNKVKNNVVGVMKQVGVDGRLIASI
ERRQFSDTVVLYSLMVVMVLLLALAVLYKYQRHKHSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027027GOSR2/Membrin/Bos1