Gchil3006.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3006.t1
Unique NameGchil3006.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length396
Homology
BLAST of Gchil3006.t1 vs. uniprot
Match: R7QBJ4_CHOCR (GRAM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBJ4_CHOCR)

HSP 1 Score: 228 bits (581), Expect = 1.620e-68
Identity = 121/223 (54.26%), Postives = 159/223 (71.30%), Query Frame = 0
Query:  155 PAADRPAARTPDLKATAAHLAHAASAELQHASEAAQHTFGKAAQELGKGWGTLNSFLDDMLAPAASSTASHRAAPSSDAQR----VLKHFHQHFPTLPERDDVVDHFECTLIQKYRCQLNDATPEKVFPLSGTMFVTTSHIAMYIVDRHTVFSSESFGVTIPLADVAKIQKGAKSMLRLLTVDKHSYIFAQFESNTHFNAAISLLEHMT----APPQALSEPP 369
            P A   A  + ++ ATA ++A+AA+AEL+HAS+AA  TFGKAAQE+GKGWGTLN+FLDD+LA          A P SD       +   F + FP + + D+VVDHF+CTL+QKYRC LN++TPEK +PL G +FV+TSHIA+Y+ D    F  + FGV++P ADV KIQKGAKSMLRL+T  + SYIFA+FES++H++ A+SLLEHMT    APP+A    P
Sbjct:   96 PKASHAADHSDEIGATATNIANAATAELEHASKAAHETFGKAAQEIGKGWGTLNTFLDDILA----------AKPDSDKDDEDMDIHASFRELFPDIEKDDEVVDHFKCTLLQKYRCYLNNSTPEKTYPLRGRLFVSTSHIALYVTDDGGAFGGKPFGVSVPFADVGKIQKGAKSMLRLVTKSQSSYIFAEFESDSHYSGALSLLEHMTGAGAAPPKAADRAP 308          
BLAST of Gchil3006.t1 vs. uniprot
Match: A0A2V3IUQ4_9FLOR (AB hydrolase superfamily protein YdjP n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUQ4_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 1.300e-60
Identity = 113/185 (61.08%), Postives = 138/185 (74.59%), Query Frame = 0
Query:  199 ELGKGWGTLNSFLDDMLAPAASSTASHRAAPSSDAQRVLKHFHQHFPTLPERDDVVDHFECTLIQKYRCQLNDATPEKVFPLSGTMFVTTSHIAMYIVDRHTVFSSESFGVTIPLADVAKIQKGAKSMLRLLTVDKHSYIFAQFESNTHFNAAISLLEHMTAPPQALSEPPRAQTPPSPADQPSH 383
            ++GKGWGTLN+FLDDMLAP +SS+ +  + P   +Q + + FH++FP L   D VVDHFEC LIQKYRC LN+ATPEKVF L GT++VTT+HIAMY+ D H  FS + FG+TI L DVAK QKGAKSMLRLLT+   SYIFAQF+S+T F AAI+LLEHM A  Q L++P  A  PPS  D   H
Sbjct:  506 QIGKGWGTLNTFLDDMLAPDSSSS-NPTSLPDDTSQHLSQAFHRYFPHLDPHDQVVDHFECALIQKYRCYLNNATPEKVFILRGTLYVTTTHIAMYVTDNHAHFSPDPFGITIALKDVAKFQKGAKSMLRLLTLHHSSYIFAQFQSDTKFTAAITLLEHMAAASQPLAQPNPA--PPSAPDNEPH 687          
BLAST of Gchil3006.t1 vs. uniprot
Match: A0A7S3E9T6_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9T6_9RHOD)

HSP 1 Score: 125 bits (313), Expect = 3.520e-29
Identity = 71/178 (39.89%), Postives = 97/178 (54.49%), Query Frame = 0
Query:  181 ELQHASEAAQHTFGKAAQELGKGWGTLNSFLDDMLAPAASSTASHRAAPSSDAQRVLKHFHQHFPTLPERDDVVDHFECTLIQKYRCQLNDATPEKVFPLSGTMFVTTSHIAMYIVDRHTVFSSESFGVTIPLADVAKIQKGAKSMLRLLTVDKHSYIFAQFESNTHFNAAISLLEHM 358
            +L+  S+          +ELGKGW  L++F+D +L               S ++RV   F   FP L + +DVVD F C+L+QKYRC  N  TPEK +   GT++VT +  A +  D    F S +F V +    V KIQ+G   MLRLL   K S++F  FES TH+  AIS+LEHM
Sbjct:   88 DLESVSQGVTKNVALVGEELGKGWVGLHNFIDGVL----------NENSLSQSERVRAQFLARFPDLKD-EDVVDSFNCSLVQKYRCYHNSGTPEKHYTFDGTLYVTITSAAFWAEDDEAGFGSANFPVVLKFNAVEKIQRGQPGMLRLLLNSKASFVFNSFESETHYMGAISMLEHM 254          
BLAST of Gchil3006.t1 vs. uniprot
Match: A0A7S2ZHK2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZHK2_9RHOD)

HSP 1 Score: 81.6 bits (200), Expect = 5.000e-14
Identity = 48/149 (32.21%), Postives = 76/149 (51.01%), Query Frame = 0
Query:  181 ELQHASEAAQHTFGKAAQELGKGWGTLNSFLDDMLAPAASSTASHRAAPSSDAQRVLKHFHQHFPTLPERDDVVDHFECTLIQKYRCQLNDATPEKVFPLSGTMFVTTSHIAMYIVDRHTVFSSESFGVTIPLADVAKIQKGAKSMLRL 329
            +L+  S+          +ELGKGW  L++F+D +L               S ++RV   F   FP L + +DVVD F C+L+QKYRC  N  TPEK +   GT++VT +  A +  D    F S +F V+  + ++ + Q     ++R+
Sbjct:   88 DLESVSQGVTKNVALVGEELGKGWVGLHNFIDGVL----------NENSLSQSERVRAQFLARFPDLKD-EDVVDSFNCSLVQKYRCYHNSGTPEKHYTFDGTLYVTITSAAFWAEDDEAGFGSANFPVSQEIQNLKRHQNLRSMLIRV 225          
The following BLAST results are available for this feature:
BLAST of Gchil3006.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7QBJ4_CHOCR1.620e-6854.26GRAM domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A2V3IUQ4_9FLOR1.300e-6061.08AB hydrolase superfamily protein YdjP n=1 Tax=Grac... [more]
A0A7S3E9T6_9RHOD3.520e-2939.89Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZHK2_9RHOD5.000e-1432.21Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 23..44
score: 24.55
coord: 47..63
score: 38.82
coord: 135..160
score: 28.46
coord: 4..16
score: 46.15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR48148KERATINOCYTE PROLINE-RICH PROTEINcoord: 6..386
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 238..323
e-value: 8.0E-5
score: 32.0
IPR004182GRAM domainPFAMPF02893GRAMcoord: 239..358
e-value: 3.3E-8
score: 33.4
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 236..359
e-value: 9.9E-10
score: 40.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:969620..970807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3006.t1Gchil3006.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 969620..970807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3006.t1 ID=Gchil3006.t1|Name=Gchil3006.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=396bp
MPTDLPPAAPPSSPPPERRPDAPADAPADAPAVEPAIEPAIEPAIEPAAA
PKPTTPSAEPQPPSSPFGGWAALDRLHLRTLFSAPDAVDADEADDADDAD
DANHVTGTTAVRPASSAKATPTTTATATAATTATTAEQPPSPSSPPSSPP
SSQHPAADRPAARTPDLKATAAHLAHAASAELQHASEAAQHTFGKAAQEL
GKGWGTLNSFLDDMLAPAASSTASHRAAPSSDAQRVLKHFHQHFPTLPER
DDVVDHFECTLIQKYRCQLNDATPEKVFPLSGTMFVTTSHIAMYIVDRHT
VFSSESFGVTIPLADVAKIQKGAKSMLRLLTVDKHSYIFAQFESNTHFNA
AISLLEHMTAPPQALSEPPRAQTPPSPADQPSHAPTAQTGTVRLH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
IPR011993PH-like_dom_sf