Gchil2990.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2990.t1
Unique Name	Gchil2990.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	511

Homology

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BLAST of Gchil2990.t1 vs. uniprot
Match: A0A2V3IUN8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUN8_9FLOR)

HSP 1 Score: 461 bits (1187), Expect = 1.650e-155
Identity = 299/510 (58.63%), Postives = 399/510 (78.24%), Query Frame = 0

Query:    2 VEVNCHDLSSVESLISSLQTKLRQAHNKNNRNEAQILSYQRRLFKLLRKQKQTQTQISSSPSKRGDPNVQHTPSKQAPLQSPPSVDKFARLAADLDVSRSKVRQLTEQNLILSKQLKDRDETIASDATEMAKLRQQDLQLRDVQXXXXXXXXEKEALEIQTSSLSSESNLRMTIGEQNVRFLQKEVKRLNEELATTRCEADAAAASSSSALRTANELQNNLSQQVLQVRSTNARMEQYIADLEKQLSSVRTAAEQQRSTSEQEIARLGEIADIQKQMTSQAEQRVKDYEAIIETLQQELQQNE-QPTTIRSVQSHTEVLLKSMEQTLDAKQAELRQMHLEQQKLKAAHGSMVQNEQHLKRTAEEAREEAKQAQREILRLKAIMKEDSVRRGRSEPKGSALRGSHETRRLSFGTTSGAGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDFDDPEIGPRSTIPLHPPHQNANLADVDAHLQELFNIRMRHQKILAALQDRRNARMSTE 510
            ++++ + +++V +L+S+LQT+L+ A+ +N + EA I+SYQR+L KL+RK+ ++ T   + P K  + N + +    +P +  P+ D+ ARL ADL ++RSK +QL+++NL LS+QLK RD+ +ASD  E+++LRQ +L++RD++        E  +L+++  +L +E+NLR+ +GE++ R LQKEVKRLNEELAT RCEADAAAASSSSALRTANELQ NL+QQ+   ++TN  MEQYIA++EKQLS+VRT AEQQ+ T E+E  RL +IADIQK+MT QAEQR+KD+EAI+ETLQQE+Q+ + QP T+RSVQSHTEVLLKSMEQ LDAKQA+LRQ+ L+QQKLK++H  M+QNEQ LKR A+EAR+EA+QAQRE++RLKAI++E S ++GR  P  +A   + E +RLSF T S   R     XXXXXXXXXXXXXXXXXXXXXXXXX   F+DPEIGPRSTIPLHPP Q+    DVD+ LQELFNIRMRHQKIL A+Q+ +N RMSTE
Sbjct:    1 MDIDKNRIAAVYNLVSALQTQLQTANLQNQKYEAIIVSYQRKLSKLIRKRNRSPTNQLAPPKKPQNDNEKTSTPTHSPSKQTPATDRLARLTADLHLARSKNKQLSDENLSLSRQLKSRDDALASDTAELSRLRQDNLKMRDLEMRINVLEAENASLKLRDQTLQNENNLRLNLGEESTRVLQKEVKRLNEELATARCEADAAAASSSSALRTANELQINLTQQLTDAKTTNTHMEQYIANIEKQLSAVRTEAEQQKLTFEEEADRLKQIADIQKEMTIQAEQRLKDFEAIVETLQQEVQEKDRQPKTVRSVQSHTEVLLKSMEQALDAKQAQLRQISLDQQKLKSSHSKMLQNEQQLKRIADEARQEARQAQREVVRLKAIIQEMSKQKGR--PVDTAEEAT-EAKRLSFETGSIPLRNSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNDPEIGPRSTIPLHPPRQDEVPMDVDSQLQELFNIRMRHQKILRAMQETKNMRMSTE 507

The following BLAST results are available for this feature:

BLAST of Gchil2990.t1 vs. uniprot

BLAST of Gchil2990.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IUN8_9FLOR	1.650e-155	58.63	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..161
None	No IPR available	COILS	Coil	Coil	coord: 320..347
None	No IPR available	COILS	Coil	Coil	coord: 9..43
None	No IPR available	COILS	Coil	Coil	coord: 352..382
None	No IPR available	COILS	Coil	Coil	coord: 215..260
None	No IPR available	COILS	Coil	Coil	coord: 279..299
None	No IPR available	COILS	Coil	Coil	coord: 173..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 407..430
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..472

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000106_pilon	contig	tig00000106_pilon:706583..708115 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2990.t1	Gchil2990.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000106_pilon 706583..708115 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2990.t1 ID=Gchil2990.t1|Name=Gchil2990.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=511bp
MVEVNCHDLSSVESLISSLQTKLRQAHNKNNRNEAQILSYQRRLFKLLRK
QKQTQTQISSSPSKRGDPNVQHTPSKQAPLQSPPSVDKFARLAADLDVSR
SKVRQLTEQNLILSKQLKDRDETIASDATEMAKLRQQDLQLRDVQMQLKL
VQSEKEALEIQTSSLSSESNLRMTIGEQNVRFLQKEVKRLNEELATTRCE
ADAAAASSSSALRTANELQNNLSQQVLQVRSTNARMEQYIADLEKQLSSV
RTAAEQQRSTSEQEIARLGEIADIQKQMTSQAEQRVKDYEAIIETLQQEL
QQNEQPTTIRSVQSHTEVLLKSMEQTLDAKQAELRQMHLEQQKLKAAHGS
MVQNEQHLKRTAEEAREEAKQAQREILRLKAIMKEDSVRRGRSEPKGSAL
RGSHETRRLSFGTTSGAGRESGSGRFSGFGRSSAFGQDPAFGRESGMGRH
SDFDDPEIGPRSTIPLHPPHQNANLADVDAHLQELFNIRMRHQKILAALQ
DRRNARMSTE*