Gchil2990.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2990.t1
Unique NameGchil2990.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length511
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:706583..708115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2990Gchil2990Gracilaria chilensis NLEC103_M9 malegenetig00000106_pilon 706583..708115 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2990.t1.start1Gchil2990.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000106_pilon 706583..706585 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2990.t1.CDS1Gchil2990.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000106_pilon 706583..708115 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2990.t1.exon1Gchil2990.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000106_pilon 706583..708115 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2990.t1.stop1Gchil2990.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000106_pilon 708113..708115 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2990.t1Gchil2990.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000106_pilon 706583..708115 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2990.t1 ID=Gchil2990.t1|Name=Gchil2990.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=511bp
MVEVNCHDLSSVESLISSLQTKLRQAHNKNNRNEAQILSYQRRLFKLLRK
QKQTQTQISSSPSKRGDPNVQHTPSKQAPLQSPPSVDKFARLAADLDVSR
SKVRQLTEQNLILSKQLKDRDETIASDATEMAKLRQQDLQLRDVQMQLKL
VQSEKEALEIQTSSLSSESNLRMTIGEQNVRFLQKEVKRLNEELATTRCE
ADAAAASSSSALRTANELQNNLSQQVLQVRSTNARMEQYIADLEKQLSSV
RTAAEQQRSTSEQEIARLGEIADIQKQMTSQAEQRVKDYEAIIETLQQEL
QQNEQPTTIRSVQSHTEVLLKSMEQTLDAKQAELRQMHLEQQKLKAAHGS
MVQNEQHLKRTAEEAREEAKQAQREILRLKAIMKEDSVRRGRSEPKGSAL
RGSHETRRLSFGTTSGAGRESGSGRFSGFGRSSAFGQDPAFGRESGMGRH
SDFDDPEIGPRSTIPLHPPHQNANLADVDAHLQELFNIRMRHQKILAALQ
DRRNARMSTE*
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spliced messenger RNA

>Gchil2990.t1 ID=Gchil2990.t1|Name=Gchil2990.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1533bp|location=Sequence derived from alignment at tig00000106_pilon:706583..708115+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGAGGTCAACTGCCATGATTTATCTTCTGTCGAGAGCCTCATATC
GTCCCTTCAGACCAAACTGCGACAGGCGCACAATAAGAACAACAGGAATG
AGGCTCAAATCCTGTCCTACCAACGCCGACTCTTCAAACTACTTCGCAAA
CAAAAGCAAACCCAAACCCAAATCTCGTCGTCTCCATCGAAGCGGGGCGA
TCCGAATGTACAACACACCCCTTCTAAACAAGCCCCGCTTCAATCACCGC
CCTCCGTAGACAAATTCGCCCGGCTCGCCGCCGATTTGGATGTATCGCGC
TCAAAAGTCAGGCAGCTCACCGAACAAAACCTTATTCTTTCCAAGCAGCT
CAAAGACCGCGACGAAACTATCGCTTCTGATGCCACCGAAATGGCCAAAC
TACGTCAACAAGACCTGCAGCTACGCGACGTGCAAATGCAACTCAAGCTC
GTTCAATCGGAGAAGGAGGCGTTAGAAATTCAAACCTCGTCCTTGAGCAG
TGAAAGCAATCTACGTATGACAATAGGAGAACAGAACGTTCGATTCTTGC
AGAAAGAGGTCAAGCGATTGAACGAGGAGCTGGCCACCACTCGTTGTGAG
GCCGATGCAGCGGCTGCATCATCATCATCGGCGTTGAGGACTGCTAATGA
ACTGCAAAACAATTTGAGTCAGCAAGTGCTTCAAGTCAGATCAACAAATG
CGCGTATGGAACAATACATTGCCGATCTTGAGAAGCAATTAAGCTCTGTT
CGCACCGCGGCGGAGCAACAGAGGAGTACAAGCGAGCAAGAGATAGCTCG
TCTTGGAGAAATTGCGGATATTCAAAAGCAAATGACCTCCCAAGCAGAAC
AAAGGGTCAAAGACTACGAAGCAATTATAGAAACTCTGCAACAAGAATTG
CAACAAAATGAACAACCGACCACAATCAGATCGGTTCAATCCCACACAGA
GGTGTTGCTCAAAAGCATGGAACAGACTTTGGACGCCAAACAAGCTGAGT
TACGCCAAATGCATCTCGAGCAACAAAAGCTCAAGGCTGCCCATGGCTCT
ATGGTGCAGAATGAACAGCATCTCAAGCGCACAGCCGAAGAAGCGCGCGA
AGAAGCTAAACAGGCGCAGAGGGAAATCCTCCGTCTGAAGGCCATCATGA
AGGAGGACTCAGTACGAAGGGGACGTAGCGAACCAAAAGGAAGTGCTCTG
AGAGGGTCACACGAAACTCGTCGTCTGAGCTTTGGAACAACAAGTGGTGC
AGGTAGGGAATCGGGTTCGGGACGATTCTCTGGGTTTGGGCGTAGTTCGG
CGTTTGGACAGGATCCTGCATTTGGCAGGGAATCAGGCATGGGAAGGCAT
TCTGATTTCGATGACCCAGAGATTGGTCCTCGCTCGACCATCCCACTCCA
CCCTCCTCATCAGAATGCGAATCTCGCAGATGTTGATGCTCATCTGCAAG
AGTTGTTTAACATCCGCATGCGTCATCAGAAGATTTTGGCCGCGTTGCAG
GATAGGAGAAATGCGAGAATGTCAACGGAGTGA
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protein sequence of Gchil2990.t1

>Gchil2990.t1 ID=Gchil2990.t1|Name=Gchil2990.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=511bp
MVEVNCHDLSSVESLISSLQTKLRQAHNKNNRNEAQILSYQRRLFKLLRK
QKQTQTQISSSPSKRGDPNVQHTPSKQAPLQSPPSVDKFARLAADLDVSR
SKVRQLTEQNLILSKQLKDRDETIASDATEMAKLRQQDLQLRDVQMQLKL
VQSEKEALEIQTSSLSSESNLRMTIGEQNVRFLQKEVKRLNEELATTRCE
ADAAAASSSSALRTANELQNNLSQQVLQVRSTNARMEQYIADLEKQLSSV
RTAAEQQRSTSEQEIARLGEIADIQKQMTSQAEQRVKDYEAIIETLQQEL
QQNEQPTTIRSVQSHTEVLLKSMEQTLDAKQAELRQMHLEQQKLKAAHGS
MVQNEQHLKRTAEEAREEAKQAQREILRLKAIMKEDSVRRGRSEPKGSAL
RGSHETRRLSFGTTSGAGRESGSGRFSGFGRSSAFGQDPAFGRESGMGRH
SDFDDPEIGPRSTIPLHPPHQNANLADVDAHLQELFNIRMRHQKILAALQ
DRRNARMSTE*
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mRNA from alignment at tig00000106_pilon:706583..708115+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2990.t1 ID=Gchil2990.t1|Name=Gchil2990.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1533bp|location=Sequence derived from alignment at tig00000106_pilon:706583..708115+ (Gracilaria chilensis NLEC103_M9 male)
ATGGTGGAGGTCAACTGCCATGATTTATCTTCTGTCGAGAGCCTCATATC
GTCCCTTCAGACCAAACTGCGACAGGCGCACAATAAGAACAACAGGAATG
AGGCTCAAATCCTGTCCTACCAACGCCGACTCTTCAAACTACTTCGCAAA
CAAAAGCAAACCCAAACCCAAATCTCGTCGTCTCCATCGAAGCGGGGCGA
TCCGAATGTACAACACACCCCTTCTAAACAAGCCCCGCTTCAATCACCGC
CCTCCGTAGACAAATTCGCCCGGCTCGCCGCCGATTTGGATGTATCGCGC
TCAAAAGTCAGGCAGCTCACCGAACAAAACCTTATTCTTTCCAAGCAGCT
CAAAGACCGCGACGAAACTATCGCTTCTGATGCCACCGAAATGGCCAAAC
TACGTCAACAAGACCTGCAGCTACGCGACGTGCAAATGCAACTCAAGCTC
GTTCAATCGGAGAAGGAGGCGTTAGAAATTCAAACCTCGTCCTTGAGCAG
TGAAAGCAATCTACGTATGACAATAGGAGAACAGAACGTTCGATTCTTGC
AGAAAGAGGTCAAGCGATTGAACGAGGAGCTGGCCACCACTCGTTGTGAG
GCCGATGCAGCGGCTGCATCATCATCATCGGCGTTGAGGACTGCTAATGA
ACTGCAAAACAATTTGAGTCAGCAAGTGCTTCAAGTCAGATCAACAAATG
CGCGTATGGAACAATACATTGCCGATCTTGAGAAGCAATTAAGCTCTGTT
CGCACCGCGGCGGAGCAACAGAGGAGTACAAGCGAGCAAGAGATAGCTCG
TCTTGGAGAAATTGCGGATATTCAAAAGCAAATGACCTCCCAAGCAGAAC
AAAGGGTCAAAGACTACGAAGCAATTATAGAAACTCTGCAACAAGAATTG
CAACAAAATGAACAACCGACCACAATCAGATCGGTTCAATCCCACACAGA
GGTGTTGCTCAAAAGCATGGAACAGACTTTGGACGCCAAACAAGCTGAGT
TACGCCAAATGCATCTCGAGCAACAAAAGCTCAAGGCTGCCCATGGCTCT
ATGGTGCAGAATGAACAGCATCTCAAGCGCACAGCCGAAGAAGCGCGCGA
AGAAGCTAAACAGGCGCAGAGGGAAATCCTCCGTCTGAAGGCCATCATGA
AGGAGGACTCAGTACGAAGGGGACGTAGCGAACCAAAAGGAAGTGCTCTG
AGAGGGTCACACGAAACTCGTCGTCTGAGCTTTGGAACAACAAGTGGTGC
AGGTAGGGAATCGGGTTCGGGACGATTCTCTGGGTTTGGGCGTAGTTCGG
CGTTTGGACAGGATCCTGCATTTGGCAGGGAATCAGGCATGGGAAGGCAT
TCTGATTTCGATGACCCAGAGATTGGTCCTCGCTCGACCATCCCACTCCA
CCCTCCTCATCAGAATGCGAATCTCGCAGATGTTGATGCTCATCTGCAAG
AGTTGTTTAACATCCGCATGCGTCATCAGAAGATTTTGGCCGCGTTGCAG
GATAGGAGAAATGCGAGAATGTCAACGGAGTGA
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Coding sequence (CDS) from alignment at tig00000106_pilon:706583..708115+

>Gchil2990.t1 ID=Gchil2990.t1|Name=Gchil2990.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1533bp|location=Sequence derived from alignment at tig00000106_pilon:706583..708115+ (Gracilaria chilensis NLEC103_M9 male)
ATGGTGGAGGTCAACTGCCATGATTTATCTTCTGTCGAGAGCCTCATATC
GTCCCTTCAGACCAAACTGCGACAGGCGCACAATAAGAACAACAGGAATG
AGGCTCAAATCCTGTCCTACCAACGCCGACTCTTCAAACTACTTCGCAAA
CAAAAGCAAACCCAAACCCAAATCTCGTCGTCTCCATCGAAGCGGGGCGA
TCCGAATGTACAACACACCCCTTCTAAACAAGCCCCGCTTCAATCACCGC
CCTCCGTAGACAAATTCGCCCGGCTCGCCGCCGATTTGGATGTATCGCGC
TCAAAAGTCAGGCAGCTCACCGAACAAAACCTTATTCTTTCCAAGCAGCT
CAAAGACCGCGACGAAACTATCGCTTCTGATGCCACCGAAATGGCCAAAC
TACGTCAACAAGACCTGCAGCTACGCGACGTGCAAATGCAACTCAAGCTC
GTTCAATCGGAGAAGGAGGCGTTAGAAATTCAAACCTCGTCCTTGAGCAG
TGAAAGCAATCTACGTATGACAATAGGAGAACAGAACGTTCGATTCTTGC
AGAAAGAGGTCAAGCGATTGAACGAGGAGCTGGCCACCACTCGTTGTGAG
GCCGATGCAGCGGCTGCATCATCATCATCGGCGTTGAGGACTGCTAATGA
ACTGCAAAACAATTTGAGTCAGCAAGTGCTTCAAGTCAGATCAACAAATG
CGCGTATGGAACAATACATTGCCGATCTTGAGAAGCAATTAAGCTCTGTT
CGCACCGCGGCGGAGCAACAGAGGAGTACAAGCGAGCAAGAGATAGCTCG
TCTTGGAGAAATTGCGGATATTCAAAAGCAAATGACCTCCCAAGCAGAAC
AAAGGGTCAAAGACTACGAAGCAATTATAGAAACTCTGCAACAAGAATTG
CAACAAAATGAACAACCGACCACAATCAGATCGGTTCAATCCCACACAGA
GGTGTTGCTCAAAAGCATGGAACAGACTTTGGACGCCAAACAAGCTGAGT
TACGCCAAATGCATCTCGAGCAACAAAAGCTCAAGGCTGCCCATGGCTCT
ATGGTGCAGAATGAACAGCATCTCAAGCGCACAGCCGAAGAAGCGCGCGA
AGAAGCTAAACAGGCGCAGAGGGAAATCCTCCGTCTGAAGGCCATCATGA
AGGAGGACTCAGTACGAAGGGGACGTAGCGAACCAAAAGGAAGTGCTCTG
AGAGGGTCACACGAAACTCGTCGTCTGAGCTTTGGAACAACAAGTGGTGC
AGGTAGGGAATCGGGTTCGGGACGATTCTCTGGGTTTGGGCGTAGTTCGG
CGTTTGGACAGGATCCTGCATTTGGCAGGGAATCAGGCATGGGAAGGCAT
TCTGATTTCGATGACCCAGAGATTGGTCCTCGCTCGACCATCCCACTCCA
CCCTCCTCATCAGAATGCGAATCTCGCAGATGTTGATGCTCATCTGCAAG
AGTTGTTTAACATCCGCATGCGTCATCAGAAGATTTTGGCCGCGTTGCAG
GATAGGAGAAATGCGAGAATGTCAACGGAGTGA
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