Gchil2954.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2954.t1
Unique NameGchil2954.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length315
Homology
BLAST of Gchil2954.t1 vs. uniprot
Match: A0A2V3J4L9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L9_9FLOR)

HSP 1 Score: 246 bits (627), Expect = 8.560e-77
Identity = 135/292 (46.23%), Postives = 187/292 (64.04%), Query Frame = 0
Query:   35 LRAMQPSAAN-PLAVRLAPNIDSLLTDEALLDEIA-ANKQFAYFPSADLLLASVAKAGSTSMFRWLYSGITGNKEYSNDVCGTNVQDIQSDCWNSKAVYLKDISMAERRRILSSKSTLRVAIQRNPFDRLISAFNDKFACVTEQFNADL-TYSMIVPYLRDLAELPESPKKCMNISEFAEALDLVRE-----------KKVVPLQQLDVHIRPQQLHFDYIPYDIIVDVKRLSNVSLLQPVVDRLPFGDLVKEGIEHRHAVKRAELMIPEKTAKRLYLFASESDMGEERFPV 312
            L  + PSA+  P + RL      L  D+ALL  I   N+ F Y PSAD+LLA++AK GSTS+F+ +++G+TG   YS   CG+ V ++ S CWN++A YL ++S+  RR++L+  +TLRVAIQRNP+DRL+SAF  KF C T  +  D+     +VP LR  A LP +   CMNISEFAEALD  R+            K+  L++LD+HIRPQQ  F+YI Y I++DV  LSNV+ L P++ RLPF DLV +G+   HA K   L++PE  A +L+ FA ES +G  ++P 
Sbjct:   12 LHLLLPSASIVPGSARLT---SPLADDDALLKLITDKNRDFVYIPSADILLATLAKGGSTSLFQCIFAGVTGVPRYSVKQCGSYVHNVHSPCWNNQATYLYNLSLPHRRKVLTGATTLRVAIQRNPYDRLLSAFKSKFTCNTTLYGTDVRNRESMVPTLRRQAALPLTQPNCMNISEFAEALDRCRQIVTSNRTLPFASKLKHLRKLDIHIRPQQFFFEYISYHIVLDVDDLSNVTNLTPLLRRLPFVDLVSDGVRQEHASKSYNLLVPELAAGQLHRFALESKVGAIKYPT 300          
BLAST of Gchil2954.t1 vs. uniprot
Match: R7QUW9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUW9_CHOCR)

HSP 1 Score: 162 bits (410), Expect = 9.330e-44
Identity = 85/235 (36.17%), Postives = 138/235 (58.72%), Query Frame = 0
Query:   70 NKQFAYFPSADLLLASVAKAGSTSMFRWLYSGITGNKEYSNDVCGTNVQDIQSDCWNSKAVYLKDISMAERRRILSSKSTLRVAIQRNPFDRLISAFNDKFACVTEQFNADLTY-SMIVPYLRDLAELPESPKKCMNISEFAEALDLVR---EKKVVPLQQLDVHIRPQQLHFDYIPYDIIVDVKRLSNVSLLQPVVDRLPFGDLVKEGIEHRHAVKRAELMIPEKTAKRLYLFA 300
            +  FAY P + + + + +K GST+++ WL+ G++G K    +  G+ V + Q+ CW  K ++  +++  ER +IL+    LR+AI RNPF+R++SA+  K AC ++ F  D+     ++P +   A++ +    C++I+ FAE LD +R   E+    +  LD H RPQ+ HFD I Y  I+DV  L NV+ LQP+V R+PF +L+ EG     + + A   + E TA  LY FA
Sbjct:  107 DSDFAYIPESKIFMTTTSKVGSTTLWTWLHKGLSG-KSSDKECKGSQVTNFQAPCWQGKVLHPHNMTDLERWKILNDPEVLRIAITRNPFERILSAWKSKAACESDDFGTDVRERDRLIPGMLRQAQMRKGAS-CLSITSFAEVLDKLRRMSERDDFDMTLLDKHFRPQEFHFDIINYQYILDVSMLDNVTALQPIVRRMPFPELLTEGPTKLSSSRPAYQTLSEPTAALLYKFA 339          
BLAST of Gchil2954.t1 vs. uniprot
Match: A0A2V3ISN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN0_9FLOR)

HSP 1 Score: 150 bits (379), Expect = 4.250e-39
Identity = 85/241 (35.27%), Postives = 132/241 (54.77%), Query Frame = 0
Query:   65 DEIAANKQFAYFPSADLLLASVAKAGSTSMFRWLYSGITGNKEYSNDVCGTN-VQDIQSDCWNSKAVYLKDISMAERRRILSSKSTLRVAIQRNPFDRLISAFNDKFACVTEQFNADLTYSM-IVPYLRDLAELPESPKKCMNISEFAEALDLVR---EKKVVPLQQLDVHIRPQQLHFDYIPYDIIVDVKRLSNVSLLQPVVDRLPFGDLVKEGIEHRHAVKRAELMIPEKTAKRLYLFA 300
            D   A   F Y P   LL+ + AK  ST+++ WL+  I G++  S + C T  +Q     CW  K ++  ++S  ++  +L S S LRVAI R+PF RL+SA+  K AC +  F  D+   +  VP L   A +  +  +C++++ FA+ LD +R   E+    L+ L++H RPQ  +F  I YDII+D+  +SN S+  P++ RL F  L  +     HA  +    IPE TA +L+ FA
Sbjct:  110 DIFDATSDFIYIPYGRLLITTTAKVASTALWTWLHPAIVGHR--SQNPCNTTYIQHFAHPCWQGKPIHPSNLSRHQKYSLLKSASVLRVAITRDPFQRLLSAWKSKVACDSHDFGTDVQDRVKFVPRLLRQAGMNRTQDQCLSLAGFAQVLDRLRIKAEQNRFDLRTLNIHFRPQLSYFSVIDYDIIMDISHVSNASVFAPILRRLQFPALADDQPAKMHASSQRLQAIPETTAVQLFKFA 348          
BLAST of Gchil2954.t1 vs. uniprot
Match: A0A7S0QSV2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QSV2_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 2.360e-20
Identity = 74/282 (26.24%), Postives = 122/282 (43.26%), Query Frame = 0
Query:   75 YFPSADLLLASVAKAGSTSMFRWLYSGITGNKEYS-----------NDVCGTNVQDIQSDCWNSKAVYLKDISMAERRRILSSKSTLRVAIQRNPFDRLISAFNDKFACVTEQFNADLTYSMIVPYLRDLAEL------------------PESPKK--------------------CMNISEFAEALDLVREKKVVPLQQLDVHIRPQQLHFDYIPYDIIVDVKRLSNVSLLQPVVDRLPFGDLVKEGIE--HRHAVKRAELMIPEKTAKRLYLFASESDM 305
            Y P ADL++    K G+TS+F W+Y G+ G +              +  C   VQ  +  CW  + ++     +   +  L + +T +VAI R+P+DRL+SA+  K AC       D     I  Y R L  L                  P +P +                    C+++ ++  ALDL+R K     ++++ H RPQ   FD I YD  +++  LS+   L+P+ + L F     + I   H+ A    +L +P +  K+L  FA+ + M
Sbjct:   35 YIPEADLVICIAPKGGTTSLFNWIYRGMFGREHGLPGDPDPPGVPWDQNCKFGVQHFEEPCWKGRVIHYNQSGVQANKWRLKNAAT-KVAIFRDPYDRLLSAYKSKIAC------DDGALIDIEGYARGLLGLAGLNTSALAWTKYGPSCRPGNPCEGGLRQEMTNLYGPLWHYGYPCLSMHDYVRALDLIRTKHRA--REINAHFRPQDCFFDQIDYDYHLNITGLSSAQALRPIAESLHFSAANAQPIPIMHQTAPGTVKLWMPPEDQKKLTQFAALTGM 307          
The following BLAST results are available for this feature:
BLAST of Gchil2954.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J4L9_9FLOR8.560e-7746.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUW9_CHOCR9.330e-4436.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ISN0_9FLOR4.250e-3935.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0QSV2_9CHLO2.360e-2026.24Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 72..246
e-value: 1.7E-11
score: 44.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:431825..432769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2954.t1Gchil2954.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 431825..432769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2954.t1 ID=Gchil2954.t1|Name=Gchil2954.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=315bp
MYFEQYCPKIARNKSLYLMFVTVLLFTSLVAAFFLRAMQPSAANPLAVRL
APNIDSLLTDEALLDEIAANKQFAYFPSADLLLASVAKAGSTSMFRWLYS
GITGNKEYSNDVCGTNVQDIQSDCWNSKAVYLKDISMAERRRILSSKSTL
RVAIQRNPFDRLISAFNDKFACVTEQFNADLTYSMIVPYLRDLAELPESP
KKCMNISEFAEALDLVREKKVVPLQQLDVHIRPQQLHFDYIPYDIIVDVK
RLSNVSLLQPVVDRLPFGDLVKEGIEHRHAVKRAELMIPEKTAKRLYLFA
SESDMGEERFPVHS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase