Gchil2941.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A2V3J4A4_9FLOR (DNA polymerase III subunit epsilon n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4A4_9FLOR) HSP 1 Score: 392 bits (1008), Expect = 2.450e-133 Identity = 202/343 (58.89%), Postives = 248/343 (72.30%), Query Frame = 0
Query: 3 RPIFIWDSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKILAKADDHLRNLSVRMGNGEAAVGIQIRHMIENAAMNRRESMEPKRKNSAAVMTKGGAPTSISTN----GAMMTRSRARMQKVP---SSKEQADLKAQELSDHFLTA-VSIEDSKGDVEGEKT-QPKYVTRMGHLWHALRSCQCLEMAVSIRRVTSVPQGLQPCVWCVSSVQNRR 336
RPI IWD+ETTGLSP+K+HIVEIA+MEL CTS T +FSSLVHPPG SAPRAASRVHGITN MMQDAPSF+KVW+GVLEY+ YV H+RG PI +AHNLSFDL FL+ EL RIGE LPDWDFACSLRD+A+I+WPGHSASLASL +LL + NEEAHRALSDVETTS+I+ KAD+HLR +++RMG E AVG QIR+MIE AA RRES+ PK +N + +T+ AP N G++ TRS +R Q+ S E D+ + LT + + G EGE Y+T MG LWH R C CL++A++IR+V+SVP L+ C+ C S +R
Sbjct: 14 RPIIIWDTETTGLSPSKNHIVEIAMMELECTSPKSTPYTFSSLVHPPGESAPRAASRVHGITNDMMQDAPSFDKVWDGVLEYISYVSHQRGKPILVAHNLSFDLSFLKSELRRIGESLPDWDFACSLRDIAKIVWPGHSASLASLGQLLSIQNEEAHRALSDVETTSRIIGKADEHLRKVTMRMGAPEVAVGSQIRNMIEAAARRRRESILPKAENQRSTVTR--APMEAERNEPVDGSVTTRSMSRRQRESTRESRHEAGDIVQMQAPSALLTLNEGVSEGNGVREGEDVVHAIYITPMGQLWHTSRDCHCLDLALTIRKVSSVPPSLRRCMSCTSGPSGKR 354
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A1H9B3A1_9GAMM (DNA polymerase III subunit epsilon n=2 Tax=Ectothiorhodospira magna TaxID=867345 RepID=A0A1H9B3A1_9GAMM) HSP 1 Score: 103 bits (256), Expect = 3.820e-22 Identity = 68/188 (36.17%), Postives = 99/188 (52.66%), Query Frame = 0
Query: 5 IFIWDSETTGLSPAK-HHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRD---VARIIWPGHSASLASLCKLLRVHNE--EAHRALSDVETTSKILAKADDHLRNLSVRM 186
I I D+ETTGL PA+ H I+EI +E+ + T SF +HP A +HGITN+ + D P F +V E +E+V RG + I HN FD+GF+ HELAR+G + C++ D +AR + PG SL +LCK ++ N E H AL D +++ ++LS+ M
Sbjct: 16 IVILDTETTGLDPAEGHRIIEIGCVEM--VRRRHTARSFHQYLHPD-REVDAGAVEIHGITNEFLADKPRFAEVAEAFIEFV------RGAELII-HNAPFDVGFINHELARLGGDWGQLEDHCTITDSLVLARKMHPGQRNSLDALCKRYQIDNSGRELHGALLDARILAEVYLAMTGGQKSLSLGM 193
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A2S9D9A0_9MICC (DEAD/DEAH box helicase n=1 Tax=Arthrobacter sp. MYb23 TaxID=1848603 RepID=A0A2S9D9A0_9MICC) HSP 1 Score: 106 bits (265), Expect = 1.170e-21 Identity = 61/170 (35.88%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 4 PIFIWDSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKILA 173
P + D ETTG SP + IVEIAI+ H Q + ++S+LV P + P S VHGI++ +++AP F ++ + ++ + +AHN +FDLGFLR E R G+ +P W C+++ + + PG SASLA CK L V +AH A +D + +L+
Sbjct: 777 PYAVIDVETTGFSPQRDRIVEIAIV--HVNEQGTVQGTWSTLVDPEQATGP---SHVHGISDHDVRNAPRF-------IDVLPHIQQKLAGRTVVAHNAAFDLGFLRSEFQRAGKMIPHWPLVCTMQ-LTKSYHPGESASLADTCKRLNVETGKAHTAAADALAAAGVLS 933
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A2S5IUZ4_9MICC (DEAD/DEAH box helicase n=2 Tax=Arthrobacter pityocampae TaxID=547334 RepID=A0A2S5IUZ4_9MICC) HSP 1 Score: 105 bits (262), Expect = 2.910e-21 Identity = 59/169 (34.91%), Postives = 95/169 (56.21%), Query Frame = 0
Query: 4 PIFIWDSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKIL 172
P + D ETTG SP +H +VEIAI+ L+ + + S+++L++ + P S +HGIT+ + DAP F +V + E + + +AHN++FDLGFL E R G P W C+++ ++R PG A+LA++C+ L + AH AL+D ++IL
Sbjct: 784 PFAVIDVETTGFSPQRHRVVEIAIIRLN--AHGVRERSWTTLIN---SHQPTGPSHIHGITSADIADAPGFAEVLNEIAEQL-------SGAVVVAHNVAFDLGFLTAEFERAGMSAPAWPVLCTMQ-LSRAFEPGSPATLAAVCQRLGIDTGTAHTALADAAAAAEIL 939
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A6I3D1F3_9ACTN (Exonuclease domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A6I3D1F3_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 6.590e-21 Identity = 61/172 (35.47%), Postives = 86/172 (50.00%), Query Frame = 0
Query: 2 SRPIFIWDSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKILA 173
S P + D ETTGLSPAK I+EIA++ C +S+LV P P + +HGIT ++ AP+FE + E + + + AHNLSFD GFL E R G PD C+L+ ++ SLA+ L + + AHRAL+D T+ +LA
Sbjct: 49 SLPFAVLDVETTGLSPAKDRIIEIAVVR--CAPDGSFLDEWSTLVDPGRDPGP---THIHGITASDLEGAPAFEDIAEELRARL-------AGSMVAAHNLSFDAGFLAAEFQRAGSTTPDQPAVCTLQLARHVLKGNEGYSLAACAAALGIDHPNAHRALADTRVTASVLA 208
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A3D1A2J9_9BACT (Exonuclease domain-containing protein n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A3D1A2J9_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 4.690e-20 Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 0
Query: 9 DSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKI 171
D ETTGLSP + E+A + ++ T S LV+P G P S++HGIT+ M++D+PSF +V +L+ + + +AHN FDLGFLR E R+G P +L +AR W S L ++ L + ++ HRAL+DVE T KI
Sbjct: 19 DVETTGLSPRSARVCEVAAVSFLGAARVGT---LSELVNP-GVPIPAEVSKIHGITDAMVKDSPSFGQVAPRLLDLLE-------NAVVVAHNADFDLGFLREEFKRVGLKFPKLHVVDTLA-IARKNWKFQSNRLGNIAAELNISSQGWHRALADVEMTRKI 169
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A7V8AH58_9BACT (DNA polymerase III subunit epsilon n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A7V8AH58_9BACT) HSP 1 Score: 95.1 bits (235), Expect = 1.350e-19 Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = 0
Query: 9 DSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKI 171
D ETTGLSP + E+A + + T + LV+P G P A S +HGIT++M++D+PSF V +L + + + HN FD+ FLR E R+G P +L +AR W S SL S+ L + +E HRAL+DVETT K+
Sbjct: 22 DVETTGLSPRSARVCEVAAVSFRGAERLGT---LAELVNPGGP-IPPACSAIHGITDEMVRDSPSFGAVAPRLLAMLE-------NTVIVGHNADFDIRFLRAEFERVGLKFPGLPVVDTLA-IARKNWKFQSNSLGSIAAELSISSEGWHRALTDVETTRKV 172
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A3M1UT18_9GAMM (DNA polymerase III subunit epsilon n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1UT18_9GAMM) HSP 1 Score: 95.9 bits (237), Expect = 1.610e-19 Identity = 75/203 (36.95%), Postives = 100/203 (49.26%), Query Frame = 0
Query: 7 IWDSETTGLSPAK-HHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRD---VARIIWPGHSASLASLCKLLRVHNE--EAHRALSDVETTSKI-LAKADDHLRNLSVR----MGNGEAAVGIQIR 198
+ D+ETTGL PA+ H I+EI +EL + PT+ +F + P A VHGITN+ +QD P F + + L +V G + I HN FD+GFL HELA +GE + C + D +AR + PG SL +LCK V N E H AL D E + + LA L V G G AV +IR
Sbjct: 5 VLDTETTGLDPAEGHRIIEIGCVEL--VDRRPTRRTFHVYLQPD-REIDEGAVEVHGITNEFLQDKPRFADIVDEFLAFVE------GAELII-HNAPFDVGFLNHELALLGEDRGRIEDHCRILDTLALARRMHPGQRNSLDALCKRYGVDNSGRELHGALLDAEILADVYLAMTGGQASLLPVEEAEASGGGAEAVPDRIR 197
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A7K1A381_9ACTN (Exonuclease domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1A381_9ACTN) HSP 1 Score: 95.9 bits (237), Expect = 1.710e-19 Identity = 59/172 (34.30%), Postives = 85/172 (49.42%), Query Frame = 0
Query: 2 SRPIFIWDSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKILA 173
S P + D ETTGLSPA+ ++EIA++ C +S+LV P P + +HGI+ + AP+FE + E + E + + AHNLSFD GFL E R G PD C+L+ ++ SLA+ L + + AHRAL D T+ +LA
Sbjct: 64 SLPFAVLDVETTGLSPARDRVIEIAVVR--CAPDGSFIDEWSTLVDPGRDPGP---THIHGISAADLNGAPTFEDIAEELRERL-------AGSMVAAHNLSFDAGFLAAEFQRAGSATPDQPAVCTLQLARYVLKDNEGYSLAACAAALGIDHPNAHRALPDTRVTASVLA 223
BLAST of Gchil2941.t1 vs. uniprot
Match: A0A1J4SMH4_9BACT (Exonuclease domain-containing protein n=1 Tax=Elusimicrobia bacterium CG1_02_56_21 TaxID=1805132 RepID=A0A1J4SMH4_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 1.740e-19 Identity = 62/163 (38.04%), Postives = 85/163 (52.15%), Query Frame = 0
Query: 9 DSETTGLSPAKHHIVEIAIMELHCTSQSPTKLSFSSLVHPPGTSAPRAASRVHGITNQMMQDAPSFEKVWEGVLEYVHYVCHERGTPIFIAHNLSFDLGFLRHELARIGEPLPDWDFACSLRDVARIIWPGHSASLASLCKLLRVHNEEAHRALSDVETTSKI 171
D ETTGLSP + E+A + C ++ LS L++P G P SR+HGIT+ M++D+PSF V +L + + +AHN FDLGFL+ E R+G P + +AR W S L ++ L + NE HRALSDVE T KI
Sbjct: 19 DVETTGLSPRSARVCEVAAIGF-CGAERVGTLS--ELINP-GLPIPPEVSRIHGITDSMVKDSPSFGTVAPRLLAMLE-------GSVLVAHNADFDLGFLKAECERVGLRFPKL-YVVDTLVIARKSWKFQSNRLGNIAGELNISNENWHRALSDVEMTRKI 169 The following BLAST results are available for this feature:
BLAST of Gchil2941.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil2941.t1 ID=Gchil2941.t1|Name=Gchil2941.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=340bpback to top |