Gchil2893.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2893.t1
Unique NameGchil2893.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length414
Homology
BLAST of Gchil2893.t1 vs. uniprot
Match: A0A2V3J475_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J475_9FLOR)

HSP 1 Score: 423 bits (1088), Expect = 1.380e-143
Identity = 215/400 (53.75%), Postives = 279/400 (69.75%), Query Frame = 0
Query:    1 MFQAFIIPFALCSSSNPIGHSASPTRLGPNRRIPEHGGEHSDLLEEVSKAVEMWQIRTNSPSNWLPSNSIVRRCEVARDLHLNTLITKAGGHRYVQHMLNLDPPSTAVKSYQEQEVREMACLLSTACQANGFPPPEERFPTRHQIRQLSPTLANRIAAFPGRGGYGKLAEYIKSS--SSTSTGDFFYSSEEQHTLGTWGIWTSTDLILKELRQHQSHPRIMPRLCSLPSSIACAIQRKGGAAQFAQQTNLILEKDMLKMIRFASVVRWLDQMVQTSNPNDCPYIDLVRLQMENPPQFPSSREVHKWGMETNLARCGGRRYLALRLGFSPNCGINGLRMEPFSVHFAADILGFAISEVLVSMDGNLAMPSINFLVQNGKFNLAEATELLGGEAAVGRRIGL 398
            M Q F++P A   +S  +      T+    R   ++   H+D+L +++ AV  WQ RT SPS WLP++S+ RRC+VAR+L L+ LI KAGG+R VQ++LNL P +++ ++YQ  E+ EMA LL +  Q NG PP EE FP+R QIRQ+SPTLANRIA+FPGRGGYG+L EY+K     STST +    S ++  L  WG+WTS +LIL+ L   QSH R++PRLCSLPSSI+CA+QR+GGAA FAQQ NLILEKD  KM R ++VVRWL  +V+   P   PY D +RLQ E PP FPSS  V K GME N+ RCGGRR LALRLGF+    I GLRM P SV FAAD+L FA+  V+VS DG++A+PS ++L + GK +L +  +L GGE  VGRR+GL
Sbjct:    1 MHQGFVLPPASRLNSYSLRRGFVQTKRYQIRATSDNPA-HTDVLVQLANAVRAWQCRTKSPSTWLPTDSLTRRCDVARELQLSYLIKKAGGYRQVQNLLNLRPATSSTQTYQINELEEMAILLRSLSQQNGLPPLEEYFPSRRQIRQMSPTLANRIASFPGRGGYGRLLEYVKDGIHPSTSTQNVSQWSTDRGELREWGVWTSKELILERLATFQSHSRVLPRLCSLPSSISCAVQRQGGAALFAQQHNLILEKDFEKMSRLSTVVRWLSDVVEEDYPAHLPYGDRIRLQAETPPTFPSSNYVRKCGMEVNIQRCGGRRSLALRLGFASEYAIKGLRMGPLSVRFAADLLDFAMDTVIVSKDGSIAIPSADYLREAGKSHLVDGIQLFGGEDTVGRRLGL 399          
BLAST of Gchil2893.t1 vs. uniprot
Match: R7QJB7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJB7_CHOCR)

HSP 1 Score: 305 bits (781), Expect = 1.100e-96
Identity = 171/393 (43.51%), Postives = 240/393 (61.07%), Query Frame = 0
Query:   23 SPTRLGPNRRIPEH---GGEHSDLLEEVSKAVEMWQIRTNSPSNWLPSNSIVRRCEVARDLHLNTLITKAGGHRYVQHMLNLDPPSTAVKSYQEQEVREMACLLSTACQANGFPPPEERFPTRHQIRQLSPTLANRIAAFPGRGGYGKLAEYIKSSSSTS----TGDFFYSSEEQHTLGTWGIWTSTDLILKELRQHQSHPRIMPRLCSLPSSIACAIQRKGGAAQFAQQTNLILEKDMLKMIRFASVVRWLDQMV-------QTSNPNDCP-YIDLVRLQMENPPQFPSSREVHKWGMETNLARCGGRRYLALRLGFSPNCGINGLRMEPFSVHFAADILGFAISEVLVSMDGNLAMPSINFLVQNGKFNLAEATELLGGEAAVGRRIGLVP 400
            +P R   +R  P       E   LL +V+ A+  W   T  P   LPS+S +RRCE+AR L L  L+T+AGGHR VQ  L L P  +++ + +E+E+ E+A  L   C  +    P E FP +  IR+LSP L NRIAAFPGR GY +LAEYI++ ++ S      D F S++       WG+ T+   +  EL  +Q+HP+++PRL SLPS IA AIQR+GGAA FA+   ++L++D   ++RF+ ++RWL   V         SN N    Y+ +V+ QM++PP FPS  EV + G   ++ R GGR+ LA RLGFS   GI  + M PFSV FAAD+L  A+ +V VS D ++AMP++  +V +G+ +LA A   LGGE AVGRR+GLVP
Sbjct:   40 APPRFAEHRSTPRRWRAADEKDALLRQVTTALNQWYQETGHPKGSLPSDSHLRRCEIARRLRLQRLVTRAGGHRAVQASLGLRPIQSSLNAVKEKELAELAQSLYMLCADHDLVHPSEEFPDKKLIRKLSPPLGNRIAAFPGRNGYNRLAEYIRAKANKSFEKPVRDEFKSTKR------WGLRTNPHELRMELLAYQTHPQVLPRLNSLPSEIAGAIQRQGGAAVFARAHGMVLDRDWGNLLRFSGLIRWLSDQVFPLIDVPNGSNANTAESYLLMVQYQMKHPPNFPSPVEVARAGFTNDVLRYGGRKSLAGRLGFSRTYGIRDVFMGPFSVLFAADLLEHAVKQVHVSADCSIAMPAMECMVADGRSDLAGAVGFLGGEGAVGRRVGLVP 426          
The following BLAST results are available for this feature:
BLAST of Gchil2893.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J475_9FLOR1.380e-14353.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJB7_CHOCR1.100e-9643.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..413
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:47411..48652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2893.t1Gchil2893.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 47411..48652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2893.t1 ID=Gchil2893.t1|Name=Gchil2893.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=414bp
MFQAFIIPFALCSSSNPIGHSASPTRLGPNRRIPEHGGEHSDLLEEVSKA
VEMWQIRTNSPSNWLPSNSIVRRCEVARDLHLNTLITKAGGHRYVQHMLN
LDPPSTAVKSYQEQEVREMACLLSTACQANGFPPPEERFPTRHQIRQLSP
TLANRIAAFPGRGGYGKLAEYIKSSSSTSTGDFFYSSEEQHTLGTWGIWT
STDLILKELRQHQSHPRIMPRLCSLPSSIACAIQRKGGAAQFAQQTNLIL
EKDMLKMIRFASVVRWLDQMVQTSNPNDCPYIDLVRLQMENPPQFPSSRE
VHKWGMETNLARCGGRRYLALRLGFSPNCGINGLRMEPFSVHFAADILGF
AISEVLVSMDGNLAMPSINFLVQNGKFNLAEATELLGGEAAVGRRIGLVP
DMSKSDECESVIL*
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