Gchil2842.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2842.t1
Unique NameGchil2842.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length560
Homology
BLAST of Gchil2842.t1 vs. uniprot
Match: A0A2V3IHU9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHU9_9FLOR)

HSP 1 Score: 202 bits (515), Expect = 2.630e-57
Identity = 121/291 (41.58%), Postives = 159/291 (54.64%), Query Frame = 0
Query:  318 MIEIDRIRRNARLGRYIRIPEHWAAIESPRGCPVKLPPAISYIGSALVNNPFSEYWKVVYTEFIAKMAVFLL-----------------------------------------------VDWFGVPADQSARGTRAIHHDHSPGRTASAGDFVWYDPWTRQLITSEQARFLRENPRDMPPNQLTGYVYDATP------SENGEELHEEAPGAEAELGYEDKPELAGVATSVDQSAAAGVAQENFHGFTQQPSAVPVEDPG-LDPLRQFPLDAGFPVDQVEGDRAQLLANLR 554
            M+E+DR+R +ARLGRY+ IP+HWAAIE+PRGCP ++PP I+Y+GS LVN+P+   W V  TEFIAKMAVF+L                                               ++W  VPADQ+ARG R+   ++SPGRTA AGDFVWYDPWTRQ +TSEQA +LR+NPR  P  Q TGY+++         SE+G+  + E P       YE   E    A   ++         N  G+ QQP     +D   L+ LR+F  +AG P+  V+GDR  LL  LR
Sbjct:    1 MVEVDRVRASARLGRYVPIPDHWAAIEAPRGCPAEIPPVITYLGSHLVNDPYCGLWVVACTEFIAKMAVFILWDAYDTYRVSYMSPTAREYARNLDLSLVLGSRANQEDFRHLMNVMDQINWDLVPADQAARGNRSRQREYSPGRTADAGDFVWYDPWTRQHLTSEQAPYLRQNPRAQPATQPTGYIFEPYAAVMDYMSEDGDADYSEGP-------YEMDTE----APIPEEDTTVNPLPVNL-GY-QQPQQNSADDESELELLRRFLEEAGVPLTYVQGDRQHLLGLLR 278          
BLAST of Gchil2842.t1 vs. uniprot
Match: A0A2V3IC93_9FLOR (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC93_9FLOR)

HSP 1 Score: 154 bits (388), Expect = 2.150e-36
Identity = 122/395 (30.89%), Postives = 178/395 (45.06%), Query Frame = 0
Query:  123 YTGFRSVPLP--------------QPTVAPMPNAAY----VASAGVIRSPSRRFQRSYPPPAYFYGRYPLYNVELFAQ------------APWFDPVAIRDDALIQQYVRG-GYFPDGIPEHAIYSDDWASHIALPDNAIARYSTETL---------------SEAP----------------RTDGEGYSYIETLVEVDVSGWRGVRGVRDAALCFQQPLLRAEFRFLRK--RDIPYRDYPGWERRTRSRLGYLVPYQMIEIDRIRRNARLGRYIRIPEHWAAIESPRGCPVKLPPAISYIGSALVNNPFSEYWKVVYTEFIAKMAVFLLVD-------WFGVPADQSARGTRAIH----HDHSPGRTASAGDFVWYDPWTRQLITSEQARFLR 442
            +TGFRSVPLP              QP   P   AA      AS    R  +  F    PPP +     PLY+  + A             APWF P+A+RD+ LI  Y       P  +P     S DW   IA+P + + R S E+                  AP                RT GE   Y + L +++   WR V   R  ALC+ +P+LRAEFRFL +  R    +D+   +RR R+R GY VPYQ  EI+RI    R GRY+ +PE W+++E   GC V+LPP ++Y+GS+++ +P S  W VV +E+   +A ++L +       W+  P  ++A  +  +      + +     S  D++    WT   + + Q   LR
Sbjct:   60 FTGFRSVPLPNSSAPPASRDHSPPQPVQNPXXXAAASSQGAASGYADRPIAGIFPGQTPPPVW-----PLYDALIGADPSTRRGCLMLRHAPWFHPLAVRDEDLIASYADSVNTLPGDLPGIVTMSWDWRQRIAIPVHHVRRNSGESAVTAHAAFVCVSHLRQRRAPFEFPIREEQTFDVLMYRTRGE-MGYCDRLADLETFAWRNVPVARQEALCWVRPILRAEFRFLPQTTRSAFLQDFIRDQRRWRARFGYFVPYQNTEIERIAARHRRGRYVTLPEWWSSLEVCWGCFVELPPVLTYLGSSMLWDPRSGLWSVVVSEWAVHVAAYILAEAYDQYRLWYIQPRVRAAIRSLDLRVPLGGEANVEEMLSLLDYIEGVDWTAVPLANAQRNHLR 448          
BLAST of Gchil2842.t1 vs. uniprot
Match: A0A2V3IQI4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI4_9FLOR)

HSP 1 Score: 134 bits (338), Expect = 2.340e-33
Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 0
Query:  275 LCFQQPLLRAEFRFLRKRDIPYRDYPGWERRTRSRLGYLVPYQMIEIDRIRRNARLGRYIRIPEHWAAIESPRGCPVKLPPAISYIGSALVNNPFSEYWKVVYTEFIAKMAVFLLVD 391
            L +  P  RAEFRFL KRDI Y D P WE+R RS+LGYLVPYQM+EID++R  + + RY  I   W  IES RGC V+L PA++ +GSAL N+PFS YW VVYT+ IAK+A+++L D
Sbjct:   25 LIWISPQFRAEFRFLCKRDILYWDVPRWEQRARSQLGYLVPYQMLEIDQVRFRSPVRRYTPILRQWHKIESLRGCAVELLPALTDVGSALTNDPFSGYWIVVYTKVIAKVALYVLWD 141          
BLAST of Gchil2842.t1 vs. uniprot
Match: A0A2V3IJI8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJI8_9FLOR)

HSP 1 Score: 99.0 bits (245), Expect = 6.300e-20
Identity = 59/154 (38.31%), Postives = 74/154 (48.05%), Query Frame = 0
Query:  318 MIEIDRIRRNARLGRYIRIPEHWAAIESPRGCPVKLPPAISYIGSALVNNPFSEYWKVVYTEFIAKMAVFLLVD-----------------------------------------------WFGVPADQSARGTRAIHHDHSPGRTAS-AGDFV 423
            M EID  RR AR GRY+ IP HW  IESPRGCP +L P ++Y  S L  +P+S YW VVY EFIAK A ++L D                                               W  VP +  ARG+ A+  DH+PGRT++  GDF+
Sbjct:    1 MFEIDSNRRFARDGRYVIIPAHWNTIESPRGCPTELLPVLTYYVSELEKSPYSGYWVVVYREFIAKTACYILCDVYDTYLLWYMTPVARQLARSLDCSVVLGSSVNQADFHHLLDVMDQVNWDLVPNEHRARGSLALSADHAPGRTSNQGGDFI 154          
The following BLAST results are available for this feature:
BLAST of Gchil2842.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IHU9_9FLOR2.630e-5741.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IC93_9FLOR2.150e-3630.89Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3IQI4_9FLOR2.340e-3358.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJI8_9FLOR6.300e-2038.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:878551..880535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2842.t1Gchil2842.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 878551..880535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2842.t1 ID=Gchil2842.t1|Name=Gchil2842.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=560bp
MYLASWHPTRNHRNAEVVEYYIPPSLSANHGGRKKRLYAVGRVFRVLIVI
TNSSPPDQLLQFSTAFCSSPLFSSISRDGSNAGSNPFQPSSEDVPSGAPS
NTAGYASQPTAQLGPYRSFSTPYTGFRSVPLPQPTVAPMPNAAYVASAGV
IRSPSRRFQRSYPPPAYFYGRYPLYNVELFAQAPWFDPVAIRDDALIQQY
VRGGYFPDGIPEHAIYSDDWASHIALPDNAIARYSTETLSEAPRTDGEGY
SYIETLVEVDVSGWRGVRGVRDAALCFQQPLLRAEFRFLRKRDIPYRDYP
GWERRTRSRLGYLVPYQMIEIDRIRRNARLGRYIRIPEHWAAIESPRGCP
VKLPPAISYIGSALVNNPFSEYWKVVYTEFIAKMAVFLLVDWFGVPADQS
ARGTRAIHHDHSPGRTASAGDFVWYDPWTRQLITSEQARFLRENPRDMPP
NQLTGYVYDATPSENGEELHEEAPGAEAELGYEDKPELAGVATSVDQSAA
AGVAQENFHGFTQQPSAVPVEDPGLDPLRQFPLDAGFPVDQVEGDRAQLL
ANLRARTSL*
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