Gchil2804.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2804.t1
Unique NameGchil2804.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length248
Homology
BLAST of Gchil2804.t1 vs. uniprot
Match: A0A2V3IQ46_9FLOR (Vacuolar-sorting protein SNF8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ46_9FLOR)

HSP 1 Score: 400 bits (1029), Expect = 1.050e-139
Identity = 201/247 (81.38%), Postives = 219/247 (88.66%), Query Frame = 0
Query:    1 MPPGRRPGVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTAEPSYWILGLMPGSSAFT 247
            MPPGRRPG A+IRE+VRRREEMAKRGAMISAETAQHMK+QL+TF   LEQFA+ HK EIQ D AFRAKFH+MCASIGVDPLTSRKG WSDLL VGDYYYEL VRIIEVCV+TRPTNGGIIS  ELVSALR RR TYTENVSSDDVERAL KL+VL GGFK MMIGHRK+VQSVPVELSVDHT ALA+ EETG+ +ASAL + LKW+ +RI  TLRFLL+HEIAWLDLQT+EP+YWILGLM GSS FT
Sbjct:    1 MPPGRRPGRASIREDVRRREEMAKRGAMISAETAQHMKMQLRTFSTKLEQFAIDHKDEIQRDPAFRAKFHSMCASIGVDPLTSRKGKWSDLLGVGDYYYELAVRIIEVCVATRPTNGGIISLRELVSALRIRRTTYTENVSSDDVERALAKLNVLEGGFKVMMIGHRKVVQSVPVELSVDHTNALAISEETGYISASALREKLKWEKERIMTTLRFLLEHEIAWLDLQTSEPTYWILGLMSGSSTFT 247          
BLAST of Gchil2804.t1 vs. uniprot
Match: A0A7S0ZAI5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAI5_9RHOD)

HSP 1 Score: 258 bits (658), Expect = 2.420e-83
Identity = 118/237 (49.79%), Postives = 166/237 (70.04%), Query Frame = 0
Query:    8 GVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTAEPSYWILGLMPGSS 244
            GV+ ++E   R+    +RGA + AET + MKLQ+  F+++LE FA +HKKEIQ++  FR +FH MCA+ GVDPLTS KG+WS++L VG+YYYEL +R  E+C++TR  NGG++  +E    L  +R TYTE+VS DD+ERA+ KL VL GGF  + +G + ++QS+P+ELS DHT  L L E TG  T S+    LKW   R+R+   + L+HEIAW+D QT E +YW LGL+ G++
Sbjct:    6 GVSGLQEEAMRQRAFEERGAALEAETVEKMKLQMIEFQKNLEIFAKNHKKEIQTNPEFRTQFHKMCATAGVDPLTSTKGVWSEVLGVGNYYYELAIRTAEICINTRVLNGGMLEVSECKKRLEQKRFTYTEHVSEDDIERAVKKLKVLQGGFDIVRLGKKSVIQSIPMELSPDHTTILRLAENTGFLTLSSTVNALKWQENRVRDAFEYFLQHEIAWIDTQTKESTYWFLGLVKGAA 242          
BLAST of Gchil2804.t1 vs. uniprot
Match: R7Q541_CHOCR (Vacuolar sorting protein SNF8 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q541_CHOCR)

HSP 1 Score: 246 bits (628), Expect = 9.250e-80
Identity = 113/176 (64.20%), Postives = 146/176 (82.95%), Query Frame = 0
Query:   72 MCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTAEPSYWILGLMPGSSAFT 247
            MCA+IGVDPLTS+KG+WSDLL VGD+YYEL VRIIE+CV+TRP NGGI+S  EL+  L+T+R+TYTE +SSDDVERA+ KLDVLG GFK M +G+ ++V+SVPVEL+ DHT+AL  C   G+T AS L+++  WD  R R TL+FLL++EIAWLD Q++EP+YWILGL+ G+S+ T
Sbjct:    1 MCATIGVDPLTSKKGVWSDLLGVGDFYYELAVRIIEICVATRPINGGIMSLRELLPVLQTKRITYTEKISSDDVERAVAKLDVLGSGFKIMDVGNNRLVRSVPVELNPDHTKALTACGTKGYTNASELQRLTNWDAYRTRTTLQFLLQNEIAWLDAQSSEPTYWILGLVAGASSQT 176          
BLAST of Gchil2804.t1 vs. uniprot
Match: A0A5J4Z4U0_PORPP (Vacuolar-sorting protein SNF8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4U0_PORPP)

HSP 1 Score: 236 bits (601), Expect = 1.280e-74
Identity = 113/240 (47.08%), Postives = 162/240 (67.50%), Query Frame = 0
Query:    8 GVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTA--EPSYWILGLMPGSSA 245
            GV+ +    + +    + GA ++AE    MK+Q++ F+ +LE FA+ HKK+IQ++A FRAKFHAMC ++GVDPL S KG+W+  L VGDYYYEL VR  E+C++TR  NGGI+   E    L+ +R T+TE++S DDV RA+ KL VL GGF+ + +  + ++QS+PVELS D   A+ LCE+ G    S L     W  +R+   ++FLL +E+ WLDLQ A  EP+YWILGL+ G++A
Sbjct:    6 GVSGLHAQQQHKAAYEQAGAALNAELTASMKVQMEQFQHNLESFAVKHKKDIQNNAVFRAKFHAMCLTVGVDPLVSSKGVWASTLGVGDYYYELAVRTAEICITTRVLNGGILDVEECRQRLKRKRFTFTEDISHDDVLRAVEKLKVLQGGFRLVQLDKKTVIQSMPVELSRDQVTAMQLCEDNGILLKSKLASKTGWKKERVDAAVKFLLDYEMCWLDLQYAGGEPAYWILGLVKGAAA 245          
BLAST of Gchil2804.t1 vs. uniprot
Match: A0A7S0XMQ4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XMQ4_9RHOD)

HSP 1 Score: 224 bits (571), Expect = 9.800e-70
Identity = 117/252 (46.43%), Postives = 154/252 (61.11%), Query Frame = 0
Query:    5 RRPGVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEET--------GHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTAE-PSYWILGLMPGSSAFT 247
            R  G+A I    +R+  +   GA + +E    M  QL  FR+SLE FA +HK EIQ+D AFRAKFH MCA++GVDPLTS KG W   L VGD+YYEL VR +EVC+ TR  NGG+++  E    L+ +R TYTE +SSDD+ERA+ KL VL GGF  + +G   +++SVP+E S+D TR L L            G  +   + K L+W   R ++ L  LL  EIAWLD Q    P YW LGL+ G++  T
Sbjct:   16 RNVGIAGIHAAQQRQAALNSAGAALDSELTASMHQQLGEFRKSLESFARNHKHEIQNDPAFRAKFHQMCATVGVDPLTSAKGSWMAALGVGDFYYELAVRTVEVCIQTRVLNGGVLNVDECRKRLQQKRFTYTEKISSDDIERAIRKLRVLQGGFDVIKLGESSVIKSVPLEFSIDQTRVLQLATRATSAGAPVDGALSVPIVAKALEWPEHRAQDALVLLLNAEIAWLDSQARPLPLYWFLGLVSGAATST 267          
BLAST of Gchil2804.t1 vs. uniprot
Match: F2U2T5_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2T5_SALR5)

HSP 1 Score: 213 bits (541), Expect = 1.360e-65
Identity = 107/242 (44.21%), Postives = 149/242 (61.57%), Query Frame = 0
Query:    3 PGRRPGVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTAEPSYWILGLMPGSS 244
            P +  GV  ++    R+ E    G     E AQ M  QL  F+ +LE+FA  +KKEI+    FR  F  MC  IGVDPL S KG WS LL VGD+YYELGV+++E C++TR  NGG+I  AEL++A+ TRR ++ + V++ DVE A+ +L VLG GF+ + + +R++V S P EL+ DH       ++ G+ TA AL   LKW N R +  L  L++  +AW+D Q A   YW+ GLM GSS
Sbjct:    2 PRKVKGVRGLKMREARKAEAQALGEKSKQEQAQEMHKQLGIFKENLEEFARKYKKEIKRSPDFRGDFQRMCHQIGVDPLASNKGFWSQLLGVGDFYYELGVQVVEACMATRGLNGGVIDIAELLNAVNTRRGSHVQRVATGDVEEAVARLQVLGSGFRVVKVDNRRVVVSQPKELNADHMAIFNRAKDCGYVTAEALCADLKWTNDRAQTALGELVQRGVAWVDEQAAPHEYWVPGLMAGSS 243          
BLAST of Gchil2804.t1 vs. uniprot
Match: A0A7K6V6S6_9PASS (Vacuolar-sorting protein SNF8 (Fragment) n=23 Tax=Passeriformes TaxID=9126 RepID=A0A7K6V6S6_9PASS)

HSP 1 Score: 211 bits (538), Expect = 3.410e-65
Identity = 105/219 (47.95%), Postives = 144/219 (65.75%), Query Frame = 0
Query:   24 KRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQT-AEPSYWILGLMP 241
            +RG +++ +    M  QL+TFR +L++FA  HK+EI+    FR +F  MCA+IGVDPL S KG WS+LL VGD+YYELGV+IIEVC++ R  NGG+I+  EL   +   R  + ++VS DD+ RA+ KL VLG GF  + +G   +VQSVP EL++DHT  L L E+ G  T S +   LKW+ +R +  L  LLK  +AWLD Q  AEP +W+  L P
Sbjct:    6 ERGTVLAEDQLAQMSKQLETFRTNLQEFASKHKQEIRKSPEFRLQFQDMCATIGVDPLASGKGFWSELLGVGDFYYELGVQIIEVCLALRHRNGGLITLEELQQQVLKGRGKFAQDVSQDDLLRAIKKLKVLGSGFGIIPVGGTFLVQSVPAELNMDHTVVLQLAEKKGFVTVSEIRDSLKWETERAKQVLEHLLKEGMAWLDAQAPAEPQFWLPALFP 224          
BLAST of Gchil2804.t1 vs. uniprot
Match: H2TYV4_TAKRU (Vacuolar-sorting protein SNF8 n=79 Tax=Actinopteri TaxID=186623 RepID=H2TYV4_TAKRU)

HSP 1 Score: 211 bits (538), Expect = 5.790e-65
Identity = 107/233 (45.92%), Postives = 152/233 (65.24%), Query Frame = 0
Query:    8 GVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTA-EPSYWILGL 239
            G  AI +      +  +RG +I+ +    M  QL+TF+ +LE+FA  HK+EI+ ++ FR +F  MCA+IGVDPL S KG WS++L VGD+YYELGV+IIEVC++ +  NGG+I+  EL   +   R  Y ++VS DD+ RA+ KL V+G GF  + +G   +VQSVP EL++DHT  L L E+ G+ T S ++  LKW+ +R  + L  LLK  +AWLD Q A EP YW+  L
Sbjct:    7 GAGAIAKKKLAEAKYKERGTVIAEDQIAQMSKQLETFKSNLEEFASKHKQEIRKNSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLDELHHRVLKGRGKYAQDVSQDDLMRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDHTVVLQLAEKKGYVTVSEIKDGLKWERERACHVLDHLLKEGLAWLDSQAAGEPQYWLPAL 239          
BLAST of Gchil2804.t1 vs. uniprot
Match: A0A8J4PYB5_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PYB5_9MYCE)

HSP 1 Score: 211 bits (536), Expect = 7.510e-65
Identity = 105/236 (44.49%), Postives = 151/236 (63.98%), Query Frame = 0
Query:    8 GVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLDLQTAEPSYWILGLMPGS 243
            G+ A++++  +++++   G  I+ ++   +K QL  F+ +LEQFA+ HKK+IQ +  FR  F+ MC  IGVDPL S KG WS +L VGD+YYELGV+IIEVC+  R +NGG+I    L+  +R  R   +  +S DD+E A+ KL VLG GF  + I  +KIVQSVP EL+ DHT  L + ++ G TT S ++  LKW+ +R  + L FLL+  IAW+D Q+ E  YW   L   S
Sbjct:    6 GIQAVQKHTLQQKQLQTIGEQINQDSVNKIKDQLVVFKENLEQFAIKHKKDIQKNPEFRKHFNDMCLMIGVDPLASGKGFWSQVLGVGDFYYELGVQIIEVCLKYRSSNGGLIEMNLLLEYIRKMRGKNSIEISCDDIESAIGKLKVLGNGFNILKIDSKKIVQSVPCELNKDHTDVLVVAQQKGFTTVSIIQSELKWNLERTNSVLNFLLQEGIAWIDDQSTEVMYWFPSLWGNS 241          
BLAST of Gchil2804.t1 vs. uniprot
Match: A0A199UTT2_ANACO (Vacuolar protein sorting-associated protein n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A199UTT2_ANACO)

HSP 1 Score: 210 bits (534), Expect = 1.820e-64
Identity = 107/243 (44.03%), Postives = 152/243 (62.55%), Query Frame = 0
Query:    5 RRPGVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQFALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYELGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALMKLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALEKILKWDNQRIRNTLRFLLKHEIAWLD--LQTAEPSYWILGLMPGSSA 245
            RRPG+A ++     R++    G  ++   A  MK QL TFR  LE+FA  HK +I+ +  FRA+FH MCA +GVDPL S KG+W++LL +GD+YYELGV+I+++C++TR  NGG+I+  EL S L  +R T  E VS DD  RA+ KL VLG GF+ + IG RK+V+SVP EL+ DH   L + +  G+ T   ++K L W + R  + L  LLK  +A +D   +  +  YW   + P S A
Sbjct:    3 RRPGIAGLQSAAAARDQYRLVGENVAKIRADLMKEQLATFRSHLEEFARKHKNDIRKNPTFRAQFHEMCAKVGVDPLASNKGVWAELLGIGDFYYELGVQIVDICMATRSHNGGLINLQELCSLLAQKRKTAREAVSEDDCLRAISKLKVLGSGFEVISIGKRKLVRSVPTELNKDHNEILEVAQVQGYVTVEQVQKALSWSSGRATDALETLLKEGLAMIDDGHRDGKRRYWFPCVAPISVA 245          
The following BLAST results are available for this feature:
BLAST of Gchil2804.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ46_9FLOR1.050e-13981.38Vacuolar-sorting protein SNF8 n=1 Tax=Gracilariops... [more]
A0A7S0ZAI5_9RHOD2.420e-8349.79Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
R7Q541_CHOCR9.250e-8064.20Vacuolar sorting protein SNF8 n=1 Tax=Chondrus cri... [more]
A0A5J4Z4U0_PORPP1.280e-7447.08Vacuolar-sorting protein SNF8 n=1 Tax=Porphyridium... [more]
A0A7S0XMQ4_9RHOD9.800e-7046.43Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
F2U2T5_SALR51.360e-6544.21Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7K6V6S6_9PASS3.410e-6547.95Vacuolar-sorting protein SNF8 (Fragment) n=23 Tax=... [more]
H2TYV4_TAKRU5.790e-6545.92Vacuolar-sorting protein SNF8 n=79 Tax=Actinopteri... [more]
A0A8J4PYB5_9MYCE7.510e-6544.49Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A199UTT2_ANACO1.820e-6444.03Vacuolar protein sorting-associated protein n=4 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.180coord: 27..86
e-value: 3.8E-22
score: 79.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 174..245
e-value: 2.1E-17
score: 64.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 93..173
e-value: 4.6E-27
score: 95.7
IPR040608Snf8/Vps36 familyPFAMPF04157EAP30coord: 8..226
e-value: 1.0E-62
score: 211.5
IPR016689ESCRT-2 complex, Snf8PANTHERPTHR12806EAP30 SUBUNIT OF ELL COMPLEXcoord: 5..241
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 28..176
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 177..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:588229..589073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2804.t1Gchil2804.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 588229..589073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2804.t1 ID=Gchil2804.t1|Name=Gchil2804.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=248bp
MPPGRRPGVAAIRENVRRREEMAKRGAMISAETAQHMKLQLQTFRRSLEQ
FALSHKKEIQSDAAFRAKFHAMCASIGVDPLTSRKGIWSDLLNVGDYYYE
LGVRIIEVCVSTRPTNGGIISFAELVSALRTRRMTYTENVSSDDVERALM
KLDVLGGGFKTMMIGHRKIVQSVPVELSVDHTRALALCEETGHTTASALE
KILKWDNQRIRNTLRFLLKHEIAWLDLQTAEPSYWILGLMPGSSAFT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR040608Snf8/Vps36
IPR016689ESCRT-2_cplx_Snf8
IPR036390WH_DNA-bd_sf