Gchil2784.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2784.t1
Unique NameGchil2784.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length137
Homology
BLAST of Gchil2784.t1 vs. uniprot
Match: A0A2V3IGS0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGS0_9FLOR)

HSP 1 Score: 196 bits (499), Expect = 2.620e-62
Identity = 98/120 (81.67%), Postives = 108/120 (90.00%), Query Frame = 0
Query:   17 QSTAARRLPVTNSEPSKRRLVRNKADVTSDVYADARAGDMVGAPEVGTGLGPRRGRNEKKVTRAAAIQKSQSFADAWAEQNQGRVDVWLIIGAITLLTPLLILAWAVATGVIPTGGLFDD 136
            +S   ++LPVTNS PSKR+LVRNK++    VYADARAGDMVGAP+VG GLGPRRG  EKKVTRAAAIQKSQ FADAWAEQNQGRVDVWLIIGA+TLLTPL+ILAWAVATGVIPTGGLF+D
Sbjct:   34 ESQPPKKLPVTNSPPSKRKLVRNKSETGPSVYADARAGDMVGAPQVGEGLGPRRGAKEKKVTRAAAIQKSQGFADAWAEQNQGRVDVWLIIGALTLLTPLIILAWAVATGVIPTGGLFED 153          
BLAST of Gchil2784.t1 vs. uniprot
Match: A0A7J7IF34_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IF34_9RHOD)

HSP 1 Score: 80.9 bits (198), Expect = 5.390e-17
Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 0
Query:   29 SEPSKRRLVRNKADVTSDVYADARAGDMVGAPEVGTGLGPRRGRNEKKVTRAAAIQKSQSFADAWAEQNQGRVDVWLIIGAITLLTPLLILAWAVATGVIP 129
            SEP  +R  R +A +        R  D     +  T   P R   +KKVTRAAA+Q+S SF+DAWA +N+GR+DVW +IG + +L PL IL W VATGVIP
Sbjct:   32 SEPGVKRAARRRAVLALQDEPGKRLDD-----KQATVPSPNR---KKKVTRAAALQESLSFSDAWAARNRGRIDVWFVIGLLFILLPLGILIWGVATGVIP 124          
BLAST of Gchil2784.t1 vs. uniprot
Match: A0A7S1THP7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THP7_9RHOD)

HSP 1 Score: 72.4 bits (176), Expect = 2.190e-13
Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   63 GTGLGPRRG-RNEKKVTRAAAIQKSQSFADAWAEQNQGRVDVWLIIGAITLLTPLLILAWAVATGVIP 129
            G  +G R G R  KKVT+AAA Q S  FADAWA   + R DVW  IG  TLL P+ ILAW +ATG IP
Sbjct:   90 GDPVGKREGTRKNKKVTKAAAAQGSLGFADAWAASGRNRFDVWFFIGLATLLAPIGILAWGIATGRIP 157          
The following BLAST results are available for this feature:
BLAST of Gchil2784.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IGS0_9FLOR2.620e-6281.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7J7IF34_9RHOD5.390e-1747.52Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S1THP7_9RHOD2.190e-1357.35Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..124
NoneNo IPR availableTMHMMTMhelixcoord: 103..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:497990..498400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2784.t1Gchil2784.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 497990..498400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2784.t1 ID=Gchil2784.t1|Name=Gchil2784.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=137bp
MCERDATGNNDPKDKQQSTAARRLPVTNSEPSKRRLVRNKADVTSDVYAD
ARAGDMVGAPEVGTGLGPRRGRNEKKVTRAAAIQKSQSFADAWAEQNQGR
VDVWLIIGAITLLTPLLILAWAVATGVIPTGGLFDD*
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