Gchil2749.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2749.t1
Unique NameGchil2749.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length524
Homology
BLAST of Gchil2749.t1 vs. uniprot
Match: A0A7S1XF58_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF58_9RHOD)

HSP 1 Score: 202 bits (515), Expect = 5.620e-55
Identity = 146/515 (28.35%), Postives = 258/515 (50.10%), Query Frame = 0
Query:   12 LFLAFSADGRETSPNSSLLFEQDQFARDTFD----ANLISPGLFVVNENEENLSNIKLIRSIDEMLGQIKESTDRKLFPTSTAWKFFRSNLAGHIDNFVIRSRALELHYLYANSSGLIPSTIIVLRRGNSKDRLPRR----AYSTKDEVGLFPMPIIMHKKANGTFEIPSPFQDFSTALALGNDTFGRLGVDCSVGAPDQTVDIAGFTEARREDCMGAVAPISDWSECWHANNNNCGRKKF-----TKPCYRS----SWLDYDRRAFCAY--LRIRPLDKNDTFMDLLEEANSWSFDPPIGSGFPWQQALLISKSRKNKNSVQENAMEEARNQLDRTSDAVDQLIARIAISEEKSLSPRPTSIDLMLVCVAVLSALLAIDAVVIYKLVSRTFTRWMKNKTSSVFLDGFTIFFVAVTTSSPALITAAVVVYQETKIGTLNMLRGGNGWHARHILESLTGENIWLIRRIIITMDVSTSYGVRPLYIAVPLILAVLDFSVELCVLLKYHSHKYERQPG 507
            L L F         N S+    DQ  R  F+    A +I P LF        +S    +  ++  +G + +S  R++ P STAWK+F+     H D+  + + ++ELHYLYA S+GLIP  +   RRG+S  + P      A     E  L P+           +  PS   +      +GN ++G+   DC+       V IA F+  +  DC+G V P    ++C  A NN C    F     T P   S    +W  Y + A CA+  + +  L  N +F+DLLE+++ W+   P G+   +Q+ ++ ++S+ N+   Q++++ EA  Q   +S A +  I++ A   ++SL  RP++IDL LVC  +L+  LAID   +Y+  S    +++++  +   +    I F  + ++SP L+   +++Y E   G+L+ +   + ++ + I +   GE+IW +R + + +++ +  G RPLY+ +P+IL++ D + EL ++    SH + +Q G
Sbjct:   14 LMLWFEVLSGTFGQNLSIFQLLDQRTRARFESLNGAAIILPQLFGYEAGVAGVSED--LAQVESAIGDLTDSPSRRIAPASTAWKYFQQTFWSHPDDLRMTATSVELHYLYAPSTGLIPIALRDFRRGDSYWKTPPSEAIAAAVEPSETFLKPVLRKTQSSQGNLWSFPSHTDNLDGISVVGNASYGQTTNDCTERGVPIEVSIAQFSRFQTADCIGVVVPWKWDAQCLAAINN-CTDLAFMENDSTLPRCGSMPNLAWSAYYQNATCAWPGVSLYRLSSNVSFLDLLEDSSFWA--QPNGTQEMYQEIIVNTRSKANR---QQDSVTEATEQATSSSGATEAAISQAAWDIQRSLISRPSTIDLTLVCAGLLANALAIDGSKVYRGASYVAGKYIRSPVTLRRVRFGGIIFSTLLSASPGLVVTGILIYLEASWGSLHKVESLSTFYGQDIYQESAGEHIWWVRSVEVHLNILSGSGTRPLYVILPVILSLFDVAFELFLV----SHAFRKQYG 516          
The following BLAST results are available for this feature:
BLAST of Gchil2749.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1XF58_9RHOD5.620e-5528.35Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 312..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 357..380
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 381..399
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 423..473
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..356
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 474..495
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 496..523
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 400..422
NoneNo IPR availableTMHMMTMhelixcoord: 358..380
NoneNo IPR availableTMHMMTMhelixcoord: 473..495
NoneNo IPR availableTMHMMTMhelixcoord: 400..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:335846..337417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2749.t1Gchil2749.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 335846..337417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2749.t1 ID=Gchil2749.t1|Name=Gchil2749.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=524bp
MVPHALRYCTLLFLAFSADGRETSPNSSLLFEQDQFARDTFDANLISPGL
FVVNENEENLSNIKLIRSIDEMLGQIKESTDRKLFPTSTAWKFFRSNLAG
HIDNFVIRSRALELHYLYANSSGLIPSTIIVLRRGNSKDRLPRRAYSTKD
EVGLFPMPIIMHKKANGTFEIPSPFQDFSTALALGNDTFGRLGVDCSVGA
PDQTVDIAGFTEARREDCMGAVAPISDWSECWHANNNNCGRKKFTKPCYR
SSWLDYDRRAFCAYLRIRPLDKNDTFMDLLEEANSWSFDPPIGSGFPWQQ
ALLISKSRKNKNSVQENAMEEARNQLDRTSDAVDQLIARIAISEEKSLSP
RPTSIDLMLVCVAVLSALLAIDAVVIYKLVSRTFTRWMKNKTSSVFLDGF
TIFFVAVTTSSPALITAAVVVYQETKIGTLNMLRGGNGWHARHILESLTG
ENIWLIRRIIITMDVSTSYGVRPLYIAVPLILAVLDFSVELCVLLKYHSH
KYERQPGEALQQEIDSSLDSVTM*
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