Gchil2691.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2691.t1
Unique NameGchil2691.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length459
Homology
BLAST of Gchil2691.t1 vs. uniprot
Match: R7QNH5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNH5_CHOCR)

HSP 1 Score: 433 bits (1113), Expect = 1.160e-142
Identity = 205/406 (50.49%), Postives = 285/406 (70.20%), Query Frame = 0
Query:    9 VAAVTIQFVRQALAPASFIRSSQSAQLPAPVITVCLSQRGVPFSRLQMFDFVDSQQRNFNGTVPELDFSSQRIRPFKDVVERFWDNPADEDCPRVVGDYFPFPLRTLNAIAAGRASTRCRQCYRVGSKHRTVVNDTAFEKSAVLNMYTDNYFLQCMKSQAGLDDDSLEFLHSLIHQNLPDMLRLGILSAA--NRSLPQLAVRDVRRISWQQACNIFYFAYFPKKLNRVDPTVDVRYSYDGRRWSRTGRGPYFEPKVQHNFLPEESLQMFVSTNSTTRPGHLAPQHDVILIGPDTQTFATFRPIVVYGTDRYDISSSTSALRTDRVVPRFGYWLRYKIFYNYNRFVVDEYYRESTYPAGQWLVDLTGYASLFTGASVFSLLLLPLLRAVRRREKARLLRSRPEVYVW 412
            +A VT+ F ++ + P SFIR+  S  LPAPV+T+CLSQRG+PFSRLQ+++F D+Q  NF G  P+   + ++   F+ VV+RFWDNP +EDC + VGD++PFPL +LN + +G  +++CR CYRVG K   +   T F  S++L++YTDNYFLQCMKS   LD+ SL F H  +++    M  LG+LS+   N  +  L +    +I  +Q CNIFYF +FPK LN     VD++Y++DG  W+  G+GPYF+ K   + LPEESLQMFV  N +T    +    D++L+GP+TQT+A+F+P++ Y  +R+DISSST+ LR D V P FGYWL Y+++YN+NRFVV+E+Y +STYPAGQW VD++GYASLFTGAS+ SL+  PL RA +RRE  RL+  RPE Y W
Sbjct:  253 IAVVTVDFTKKQINPESFIRTQVSDSLPAPVVTICLSQRGIPFSRLQLYNFTDAQGVNFRGADPKGPQTDRQSPEFEAVVDRFWDNPGNEDCNKTVGDFYPFPLESLNQLTSGEKNSQCRPCYRVGRK-TVMATSTDFRDSSILDLYTDNYFLQCMKSINTLDNRSLTFWHGQLNEKKKKMEELGVLSSQVDNVKVADLELEQFEKIDSEQGCNIFYFGFFPKLLNTGTGGVDIKYAWDGSTWNPVGKGPYFKLKTTEDLLPEESLQMFVGRNVSTEENKVGENLDMLLLGPNTQTYASFQPVIDYDGERFDISSSTTNLRQDEVTPIFGYWLVYRVYYNFNRFVVEEHYLDSTYPAGQWFVDVSGYASLFTGASLLSLIFFPLWRARQRREDRRLMHERPEAYYW 657          
BLAST of Gchil2691.t1 vs. uniprot
Match: A0A1X6P7J0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7J0_PORUM)

HSP 1 Score: 266 bits (680), Expect = 1.020e-77
Identity = 159/440 (36.14%), Postives = 239/440 (54.32%), Query Frame = 0
Query:    6 VAAVAAVTIQFVRQALAPASFIRSSQSAQLPAPVITVCLSQRGVPFSRLQMFDFVDSQQRNFNGTVPELDFSSQRIRPFKDVVERFWDNPADEDCPRVVGDYFPFPLRTLNAIAAGRASTRCRQCYRVGSKHRTVV-NDTAFEKSAVLNMYTDNYFLQCMKSQAGLDDDSLEFLHSLIHQNLPDMLRLGILSAANR------SLPQLAVR--DVRRISWQQACNIFYFAYFPKKLNRVDPT-VDVRYSYDGRRWSRTGRGPYFEPKVQHNFL---PEESLQMFVST-NSTTRPGHLAPQHDVILIGPDTQTFATFRPIVVYGTDRYDISSSTSALR-TDRVVPRFGYWLRYKIFYNYNRFVVDEYYRESTYPAGQWLVDLTGYASLFTGASVFSLLLLPLLRAVRRREKARLLRSRP------EVYVWRRARLQDGVSAD 424
            +AA+  +T+QF      P S I   +  +L  P +TVC +Q GVP  RLQ F++ D+      G +P   F +     F+ VVERFWDNP  EDC R+ G++FP P+RTL  I+ G  ST+CR C+R GSK   V+   TAF  +A + +YTD+ F QCM    G+DD + + +   + +        G    A        ++P  + R   +  +  ++ CN+ YFA  P +LN   P   D++Y++DG  W+RTG GPYF P+ +       PEE LQ+F++  ++   PG +    D  L+GP+++    F    V    R+ ISS +S+ R    +    GYWL+Y +  +Y  FV ++     TYP  QWLVD+ GY  LFTGAS+FS++++PLL+ +RRR++   L +RP        +V R +R   GV  D
Sbjct:  292 IAAIVFITVQFANDVRNPESGIELVRHTELAMPTVTVCSTQTGVPLRRLQFFNYTDAAGVRVGGPLPFQKFGTTE---FEAVVERFWDNPDGEDCDRICGNFFPLPVRTLQQISNGELSTKCRPCFRTGSKGPEVIARSTAFSAAAFMELYTDHAFFQCMFRANGVDDPAQDEMRLTVGKADFAAEFFGATPLAPGDPTPVLTVPATSTRVDAIAALGSEELCNVLYFAVLPVRLNDSVPLDADIKYTFDGTGWTRTGDGPYFVPRTEGQVQTGSPEEGLQVFITARDAPLPPGGVTSLADTALLGPNSEVAILFNRRQVDDKPRFAISSISSSNRLVVNIADWSGYWLQYAVHLSYATFVEEQLRDVHTYPVTQWLVDVAGYIGLFTGASLFSIMVVPLLQLLRRRDRRESLAARPLDTLYSPYHVVRASRATPGVMGD 728          
BLAST of Gchil2691.t1 vs. uniprot
Match: A0A1X6P7D7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7D7_PORUM)

HSP 1 Score: 239 bits (609), Expect = 2.920e-70
Identity = 146/386 (37.82%), Postives = 210/386 (54.40%), Query Frame = 0
Query:   38 PVITVCLSQRGVPFSRLQMFDFVDSQQRNFNGTVPELDFSSQRIRPFKDVVERFWDNPADEDCPRVVGDYFPFPLRTLNAIAAGRASTRCRQCYRVGSKHRTVVND-TAFEKSAVLNMYTDNYFLQCMKSQAGLDDDSLEFLHSLIHQNLPDMLRLG----ILSAANRSLPQLAVRDVRRISWQQACNIFYFAYFPKKL-----NRVD-PTVDVRYSYDGRRWSRTGRGPYF-EPKVQHNFL--PEESLQMFVSTNSTTRP-GHLAPQHDVILIGPDTQTFATFRPIVVYGTDRYDISSSTSALRTDRVVPRF-GYWLRYKIFYNYNRFVVDEYYRESTYPAGQWLVDLTGYASLFTGASVFSLLLLPLLRAVRRREKARLLRSRP 407
            P++TVC +Q GVP  RLQ F +  +      G  P+    S     F+  V+RFWDNP  EDC  V GD++P PL +L AIAAG  +TRCR C++ G K   VV + TAF ++A + +YTD+ F QCM    G+D D LE + + +          G    +L+    +    AV D   +   + CN+ YFA  P++L     NR D P +   Y  DG  W++ G GPYF  P  +   +  PEE LQ+F+S      P G +    D  L+GP+++    F     +G  R+ ISS +S+ R    +  F GYWL+Y +  +Y  FV +      TYP  QWLVD+ GY  LFTGAS+FS++++PLL+ +RRR++   L +RP
Sbjct:    2 PLVTVCSTQTGVPLRRLQFFSYRAANGVTAAGPRPD---GSPASPAFEAAVDRFWDNPGGEDCGAVAGDFWPLPLGSLQAIAAGTRATRCRPCFQTGGKGEPVVAESTAFSRAAFMELYTDHAFFQCMFRAGGVDADGLESMRASVADPANTAEFFGGPTPVLTVGPGATQAAAVAD---LGSAELCNVLYFAVLPRRLLDAAANRTDLPAIAYTYGADGG-WAQAGDGPYFVSPTAEQVRVGSPEEGLQVFISERGRPLPPGGITSLSDTALLGPNSEASLLFTRRREFGRPRFAISSISSSNRLRVNIADFNGYWLQYALHLSYASFVEEVVKDIHTYPVTQWLVDVAGYVGLFTGASLFSIMVMPLLQLLRRRDRRESLAARP 380          
The following BLAST results are available for this feature:
BLAST of Gchil2691.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7QNH5_CHOCR1.160e-14250.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P7J0_PORUM1.020e-7736.14Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P7D7_PORUM2.920e-7037.82Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 370..391
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 392..458
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..369
NoneNo IPR availableTMHMMTMhelixcoord: 372..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000165_piloncontigtig00000165_pilon:171203..172579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2691.t1Gchil2691.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000165_pilon 171203..172579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2691.t1 ID=Gchil2691.t1|Name=Gchil2691.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=459bp
MVAGAVAAVAAVTIQFVRQALAPASFIRSSQSAQLPAPVITVCLSQRGVP
FSRLQMFDFVDSQQRNFNGTVPELDFSSQRIRPFKDVVERFWDNPADEDC
PRVVGDYFPFPLRTLNAIAAGRASTRCRQCYRVGSKHRTVVNDTAFEKSA
VLNMYTDNYFLQCMKSQAGLDDDSLEFLHSLIHQNLPDMLRLGILSAANR
SLPQLAVRDVRRISWQQACNIFYFAYFPKKLNRVDPTVDVRYSYDGRRWS
RTGRGPYFEPKVQHNFLPEESLQMFVSTNSTTRPGHLAPQHDVILIGPDT
QTFATFRPIVVYGTDRYDISSSTSALRTDRVVPRFGYWLRYKIFYNYNRF
VVDEYYRESTYPAGQWLVDLTGYASLFTGASVFSLLLLPLLRAVRRREKA
RLLRSRPEVYVWRRARLQDGVSADGLLVSPDDSDLDSDSDYDAFGTRIGS
VLLPGFNV*
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