Gchil2638.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2638.t1
Unique NameGchil2638.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length145
Homology
BLAST of Gchil2638.t1 vs. uniprot
Match: A0A2V3IEG3_9FLOR (Chromo domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEG3_9FLOR)

HSP 1 Score: 84.3 bits (207), Expect = 8.550e-17
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   15 SDGFAPLDHTLLPED----------EQQPEYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRRISQSGRGLQEGATIGANN 102
            +D +APLD   LPE+              E  I+R+ +AG+ +DG ++YRVRW+GY P EDTW+  + +P  F+  +WRR+  + R L+EGA +  +N
Sbjct:  193 NDDYAPLDEMDLPEEWPVDVPKDAASLPKESAIDRVVNAGIDDDGVVKYRVRWYGYKPSEDTWEPRENIPEKFVLRFWRRMGHTERDLKEGAYVLKSN 290          
BLAST of Gchil2638.t1 vs. uniprot
Match: A0A2V3J6Y2_9FLOR (Chromo domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Y2_9FLOR)

HSP 1 Score: 71.6 bits (174), Expect = 1.130e-13
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   34 EYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRRISQSGRGLQEGATI 98
            E  I+R+ +AG  +DG ++YRVRW+GY P +DTW+  + +P NF+  +W  + ++   L+EGA I
Sbjct:   21 ESTIDRVVNAGFDDDGVVKYRVRWYGYPPSQDTWKPRENIPKNFILRFWHPMGRTELDLKEGAYI 85          
BLAST of Gchil2638.t1 vs. uniprot
Match: A0A2V3IGI6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI6_9FLOR)

HSP 1 Score: 72.4 bits (176), Expect = 2.730e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   16 DGFAPLDHTLLPEDEQQPEYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRRISQSGRGLQEG 95
            DG+   +   LPE  ++ EYVI+ I S G+ E   + Y+VRW+GY PE+  W  P+++PANF+  YW ++    R L++G
Sbjct:  225 DGYVDFEDMYLPEKNRR-EYVIDCIVSTGVDEKVEVLYKVRWYGYGPEDGRWIPPESIPANFINRYWTKMGYKQRDLRKG 303          
BLAST of Gchil2638.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 67.4 bits (163), Expect = 2.640e-10
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
Query:    9 PSLPTDSDGFAPLDHTLLPEDEQQPEYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRR 84
            P++  D D   P+ H    E E   E+ I+RI + G  +DG++ Y VRWFGY+P+EDTW+    LP NF+  Y  R
Sbjct:  747 PTVSIDPDSEVPV-HQDPAEAEADTEHAIDRIVAHGEADDGSLLYHVRWFGYSPKEDTWERADNLPENFIRRYRAR 821          
BLAST of Gchil2638.t1 vs. uniprot
Match: R7Q2U6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2U6_CHOCR)

HSP 1 Score: 65.5 bits (158), Expect = 1.110e-9
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   14 DSDGFAPLDHTLLPEDEQQPEYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRR 84
            D D   P+ H    E E   E+ I+RI + G  +DG+  YRVRWFGY+P+EDTW+    LP NF+  Y  R
Sbjct:  368 DPDSEVPV-HQDPAEAEADTEHAIDRIVAHGEADDGSPLYRVRWFGYSPKEDTWERADNLPENFIRRYRAR 437          
BLAST of Gchil2638.t1 vs. uniprot
Match: UPI001E1D71BC (uncharacterized protein LOC123543955 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D71BC)

HSP 1 Score: 63.5 bits (153), Expect = 4.300e-9
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   34 EYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRRI 85
            E+V ERIT      DGT+RY+VRW+GY PEEDTW+    LPA  L  Y R++
Sbjct:  272 EFVFERITGMKKLNDGTLRYKVRWYGYGPEEDTWEPSSHLPAASLRRYHRKV 323          
BLAST of Gchil2638.t1 vs. uniprot
Match: UPI001E1DBA9F (uncharacterized protein LOC123544262 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBA9F)

HSP 1 Score: 62.4 bits (150), Expect = 6.870e-9
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   34 EYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRRI 85
            E+V ERIT      DGT+RY+VRW+GY PE+DTW+    LPA  L  Y R++
Sbjct:  193 EFVFERITGMKKLNDGTLRYKVRWYGYGPEDDTWEPSSHLPAASLRRYHRKV 244          
BLAST of Gchil2638.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 58.5 bits (140), Expect = 3.280e-7
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    9 PSLPTDSDGFAPLDHTLLPEDEQQPEYVIERITSAGMGEDGTMRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRR 84
            P + T+ DG    +   +  +E   EYV ERIT      DG+++Y+VRW+GY P +DTW+    LP + L  Y RR
Sbjct:  958 PPVNTEDDGVMTPEKNNIALEE---EYVFERITGMRQRNDGSVQYKVRWYGYGPGDDTWEPSAHLPKDALRRYHRR 1030          
The following BLAST results are available for this feature:
BLAST of Gchil2638.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IEG3_9FLOR8.550e-1738.78Chromo domain-containing protein n=1 Tax=Gracilari... [more]
A0A2V3J6Y2_9FLOR1.130e-1341.54Chromo domain-containing protein n=1 Tax=Gracilari... [more]
A0A2V3IGI6_9FLOR2.730e-1240.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QR94_CHOCR2.640e-1042.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q2U6_CHOCR1.110e-945.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D71BC4.300e-953.85uncharacterized protein LOC123543955 n=1 Tax=Merce... [more]
UPI001E1DBA9F6.870e-951.92uncharacterized protein LOC123544262 n=1 Tax=Merce... [more]
UPI001E1E14073.280e-739.47uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 22..87
e-value: 1.5E-10
score: 42.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..144
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 35..73
score: 10.566501
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 22..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:2090453..2090887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2638.t1Gchil2638.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 2090453..2090887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2638.t1 ID=Gchil2638.t1|Name=Gchil2638.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=145bp
MVNANYYDPSLPTDSDGFAPLDHTLLPEDEQQPEYVIERITSAGMGEDGT
MRYRVRWFGYTPEEDTWQEPQTLPANFLACYWRRISQSGRGLQEGATIGA
NNPTIGPNKPKPPLKPLPDTTVRRSTTVRRSSRIREQSQSFGDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf