Gchil2579.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2579.t1
Unique NameGchil2579.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length641
Homology
BLAST of Gchil2579.t1 vs. uniprot
Match: A0A2V3IEJ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ4_9FLOR)

HSP 1 Score: 754 bits (1948), Expect = 9.120e-267
Identity = 381/639 (59.62%), Postives = 475/639 (74.33%), Query Frame = 0
Query:    1 MASIRQP-TSKRRRSSEKTGRRFSVKDSRKQPILPTSHIASRKPSYSSNVVRVLAIAAMALLFFSASSMFRRARRSRQLAATPLDTNQVVRDVDMQNHDPESKPEPDNNESDDAKDTESKVEEHTVENAETEKPPAEDAHVQSDAEHEQK------PTQLSPDAVRHDAPEESVPMEEPLESIEWYTRSDYMEGNRPMCRISKPYLLSNGTLLVPAWMSNYEKLLDRCGLGKYGFYP-ITGPEGLEKVDMIDADFALTIHPERFQEPTHAPAVFLTEHILKPSYLFDVFGGKAAIVPGITEHHCHTTASESKCEQLRPSKAGMKPAIFVPHRIESAPSGSWSRKYVDMFGVAHGHGNGVLHLNTSSLLRKEHEGQSENIFATRFRTIMVTPGMFRHLPDSSLKRGNLFSLKNGIEKTPKPKGSGACSVTIGIANGKDPASHGIEGASDLKDKIEELGKYAMPEASMEVKTVDIGPEVDLDTHIKEMQTLDLYVAGSGDDMSSIGFLRSQSTAVELMPFALQPVVHKNLARILGIHYESFKSKPHDDDFKRCIDGEIFSLRKRGQLDLTGKPEWFEPLMNAWDAAVRQYALSGSSDFDIIGADKPVNNYHSRTCALKQRIEIAIDDIARRVINTVKESCS 631
            M S+RQP TSKRRRSSEK GRRFSVKDSRKQPILPT H  SRK + +   VR++A+AAMA+L  S SSM RRA RSR   +  +  +    D   +  +         + +D AK   S  +  T   ++   P A++ + ++D E +          + S DA      ++   ME   E IEWY+R DYMEG+RP+CRISKPY+LSNGT+L+P W+S++EK+LDRCGLG +GFY   TGP+GL   + IDAD  LT+HPERFQEPTH P+V+LTEHILK SYLF VFGG    V GI EHHC+TTASE+KC++ RP+   +KPAIFVP RIE AP G WSRKYV++ G AHG+GNG+ HLNTSSLL K H+GQ E++  TRFR++M+TPGMFRHLPD+ LK    FS+K GI K  + K SG CS+TIGIA GK+ + HGIEG SDLKDKIEELGKYA+PE S+EVK++D+GP++  D H+K+MQ LD+Y+AGSGDDMSSIGFL SQ+++ ELMPFA +P+VHKNLARILG+ Y SF SKP D DFKRCIDGEIFSLRKRGQL L+ KP+W+ PLM AW+ AV+ YALSGSSDFDIIGA+KPVNNYHSR CALKQR+E+  D+IAR+++  VKE C+
Sbjct:    1 MPSVRQPPTSKRRRSSEKNGRRFSVKDSRKQPILPTFHTGSRKSNLTFTFVRIMAVAAMAILIISVSSMIRRAARSRNFTSRYIVPSGSKGDKGNEQTEIPKAESDGTDGNDQAKSVSSDDDVKTDVTSDASAPSADETNTKADEEGQDNVQSGHASLENSNDAGESSEQKKVPYMERASEYIEWYSRDDYMEGSRPICRISKPYVLSNGTILLPDWLSSHEKVLDRCGLGNHGFYSGSTGPQGLSTQNEIDADLVLTVHPERFQEPTHVPSVYLTEHILKSSYLFGVFGGSVRSVDGIGEHHCYTTASETKCDESRPAPDQLKPAIFVPTRIEQAPEGCWSRKYVELLGDAHGNGNGIRHLNTSSLLIKSHKGQIEDLMGTRFRSVMMTPGMFRHLPDNGLKMSRFFSMKTGIHKELESKSSGKCSITIGIATGKEGSPHGIEGGSDLKDKIEELGKYALPEVSLEVKSIDVGPDISFDDHVKQMQILDMYIAGSGDDMSSIGFLHSQASSFELMPFASKPLVHKNLARILGLQYMSFSSKPQDGDFKRCIDGEIFSLRKRGQLPLSEKPDWYAPLMKAWNDAVKDYALSGSSDFDIIGAEKPVNNYHSRACALKQRVEVETDEIARKLVQAVKEKCN 639          
BLAST of Gchil2579.t1 vs. uniprot
Match: R7QJ50_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ50_CHOCR)

HSP 1 Score: 486 bits (1251), Expect = 1.710e-164
Identity = 231/423 (54.61%), Postives = 307/423 (72.58%), Query Frame = 0
Query:  211 MSNYEKLLDRCGLGKYGFYPIT-GPEGLEKVDMIDADFALTIHPERFQEPTHAPAVFLTEHILKPSYLFDVFGGKAAIVPGITEHHCHTTASESKCEQLRPSKAGMKPAIFVPHRIESAPSGSWSRKYVDMFGVAHGHGNGVLHLNTSSLLRKEHEGQSENIFATRFRTIMVTPGMFRHLPDSSLKRGNLFSLKNGIEKTPKPKG-SGACSVTIGIANGKDPASHGIEGASDLKDKIEELGKYAMPEASMEVKTVDIGPEVDLDTHIKEMQTLDLYVAGSGDDMSSIGFLRSQSTAVELMPFALQPVVHKNLARILGIHYESFKSKPHDDDFKRCIDGEIFSLRKRGQLDLTGKPEWFEPLMNAWDAAVRQYALSGSSDFDIIGADKPVNNYHSRTCALKQRIEIAIDDIARRVINTVKESCS 631
            M +YEKLL RCGLG + +Y    GPEGL  +  + ADF LTIHPERFQEPTH  +V+LTEHILK SYLFDVFGG A  V  + EHHC+T+  +S C   RP    +KPAIFVP RIE+ P+  WS++ +DM G AHGHG  ++HLN S++L KEH+G+ EN+  T FR+IM T GMFRHLP + L+  N++SLKN I+K+PK +  +GAC++TIGIA+  D    GI+G  DL++KIE + K A+P +++E KT+       L  HIKEMQ LD++V GSGD+MSS+GFLRS+S A+ELMPF ++P  H+++AR+LGI Y + + KP D  FK C++GEIF+LRK+G L  T  P+W EP + AWDAAV ++ LSGSS FD++ A +PVNNY++R CA KQ IE+AIDD AR++    KE C+
Sbjct:    1 MRDYEKLLKRCGLGTHSYYSSQKGPEGLASIQDVGADFVLTIHPERFQEPTHVASVYLTEHILKSSYLFDVFGGDAQFVEEVKEHHCYTSEKDSTCALPRPVHTILKPAIFVPKRIENGPNALWSKQLLDMLGKAHGHGQDLIHLNASTVLLKEHKGELENLIGTGFRSIMTTDGMFRHLPTNGLQHSNMYSLKNRIDKSPKEREVNGACAITIGIASSHD-RDGGIQGVDDLREKIEAVSKLAIPGSAIEAKTIIFSSVGSLQDHIKEMQQLDIFVGGSGDEMSSMGFLRSKSVAIELMPFGIKPNTHESMARVLGIGYNNIRGKPQDS-FKNCLEGEIFNLRKKGTLSYTELPDWEEPTVKAWDAAVGEFVLSGSSAFDVLTAQRPVNNYYARVCAQKQNIEVAIDDTARKIAAMAKEKCT 421          
The following BLAST results are available for this feature:
BLAST of Gchil2579.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEJ4_9FLOR9.120e-26759.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJ50_CHOCR1.710e-16454.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..640
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1652828..1654750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2579.t1Gchil2579.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 1652828..1654750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2579.t1 ID=Gchil2579.t1|Name=Gchil2579.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=641bp
MASIRQPTSKRRRSSEKTGRRFSVKDSRKQPILPTSHIASRKPSYSSNVV
RVLAIAAMALLFFSASSMFRRARRSRQLAATPLDTNQVVRDVDMQNHDPE
SKPEPDNNESDDAKDTESKVEEHTVENAETEKPPAEDAHVQSDAEHEQKP
TQLSPDAVRHDAPEESVPMEEPLESIEWYTRSDYMEGNRPMCRISKPYLL
SNGTLLVPAWMSNYEKLLDRCGLGKYGFYPITGPEGLEKVDMIDADFALT
IHPERFQEPTHAPAVFLTEHILKPSYLFDVFGGKAAIVPGITEHHCHTTA
SESKCEQLRPSKAGMKPAIFVPHRIESAPSGSWSRKYVDMFGVAHGHGNG
VLHLNTSSLLRKEHEGQSENIFATRFRTIMVTPGMFRHLPDSSLKRGNLF
SLKNGIEKTPKPKGSGACSVTIGIANGKDPASHGIEGASDLKDKIEELGK
YAMPEASMEVKTVDIGPEVDLDTHIKEMQTLDLYVAGSGDDMSSIGFLRS
QSTAVELMPFALQPVVHKNLARILGIHYESFKSKPHDDDFKRCIDGEIFS
LRKRGQLDLTGKPEWFEPLMNAWDAAVRQYALSGSSDFDIIGADKPVNNY
HSRTCALKQRIEIAIDDIARRVINTVKESCSLPQAQGSGI*
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