Gchil2575.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2575.t1
Unique NameGchil2575.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length154
Homology
BLAST of Gchil2575.t1 vs. uniprot
Match: R7QK48_CHOCR (Eukaryotic translation initiation factor 5A n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK48_CHOCR)

HSP 1 Score: 261 bits (668), Expect = 9.240e-88
Identity = 127/153 (83.01%), Postives = 144/153 (94.12%), Query Frame = 0
Query:    1 MSEHDSGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKEVQ 153
            MSEHDSGSSGASNT+PVQAGALKKG+HVVIKGF CKI++YSTSKTGKHGHAKANIVG+DIF+G+KYEDISPSSHNMMSP+VTRKD+QL+DIDEEG+VT+MDDKNETRSDLRLD   D+IHKK +EDF+ GKDL LTVLSAL  EK+IAVKE+Q
Sbjct:    1 MSEHDSGSSGASNTVPVQAGALKKGSHVVIKGFPCKIIDYSTSKTGKHGHAKANIVGIDIFTGKKYEDISPSSHNMMSPVVTRKDFQLIDIDEEGYVTIMDDKNETRSDLRLDFENDDIHKKAKEDFEEGKDLLLTVLSALDTEKVIAVKELQ 153          
BLAST of Gchil2575.t1 vs. uniprot
Match: A0A2V3IEI9_9FLOR (Eukaryotic translation initiation factor 5A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEI9_9FLOR)

HSP 1 Score: 246 bits (629), Expect = 8.130e-82
Identity = 124/153 (81.05%), Postives = 138/153 (90.20%), Query Frame = 0
Query:    1 MSEHDSGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKEVQ 153
            MSEHDSGSSGAS +IPVQAGALKKG+HVVIKGF CKIVEYSTSKTGKHGHAKANIVGVDIF+GRKYEDISPSSHNMMSPIV RKD+QL+DIDEEGFVTLMDDK+ETRSDLR+    ++IH K +E+FD  K L +TVLSA+G EKIIA KE+Q
Sbjct:    1 MSEHDSGSSGASQSIPVQAGALKKGSHVVIKGFPCKIVEYSTSKTGKHGHAKANIVGVDIFTGRKYEDISPSSHNMMSPIVNRKDFQLIDIDEEGFVTLMDDKHETRSDLRIFPETEDIHAKCKEEFDDDKSLLVTVLSAMGTEKIIAYKELQ 153          
BLAST of Gchil2575.t1 vs. uniprot
Match: A0A5J4YTQ6_PORPP (Eukaryotic translation initiation factor 5A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTQ6_PORPP)

HSP 1 Score: 223 bits (567), Expect = 2.860e-72
Identity = 108/146 (73.97%), Postives = 127/146 (86.99%), Query Frame = 0
Query:    7 GSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKEV 152
            G SGAS+T+P+QAGALKKG+ VV+KGF CKIV+YSTSKTGKHGHAKANI G+DIF+ +KYED+ P+SHNM  PIV RKDYQL+D+DEE FV+LMDDKNETR DLRLD   D++HKK+ EDF A KDL +TVLSA+G EKIIAVKEV
Sbjct:   14 GGSGASDTVPIQAGALKKGSFVVLKGFPCKIVDYSTSKTGKHGHAKANITGIDIFTNKKYEDVCPTSHNMQQPIVNRKDYQLIDVDEENFVSLMDDKNETREDLRLDEQ-DDVHKKISEDFKAEKDLVVTVLSAMGTEKIIAVKEV 158          
BLAST of Gchil2575.t1 vs. uniprot
Match: A0A1X6PCW2_PORUM (Eukaryotic translation initiation factor 5A n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PCW2_PORUM)

HSP 1 Score: 221 bits (564), Expect = 6.290e-72
Identity = 104/149 (69.80%), Postives = 132/149 (88.59%), Query Frame = 0
Query:    5 DSGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKEVQ 153
            D+  SGAS+ IP+QAGALKKG+HVV+KGF CKIV+YSTSKTGKHGHAKANI G+DIF+ RKYEDISP+SHNM+ P+V RKDYQL+DID+E ++TLMDDKN+TR+DL+LD   D++HKK++E+FD GKDL +TVL+A+  EK+IA KE+Q
Sbjct:    4 DASGSGASDCIPIQAGALKKGSHVVLKGFPCKIVDYSTSKTGKHGHAKANITGIDIFTQRKYEDISPTSHNMLQPLVNRKDYQLVDIDDEAYLTLMDDKNDTRADLKLDLDGDDVHKKIKEEFDNGKDLVVTVLAAMKTEKVIAWKELQ 152          
BLAST of Gchil2575.t1 vs. uniprot
Match: A0A7S0G3H6_9RHOD (Eukaryotic translation initiation factor 5A n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3H6_9RHOD)

HSP 1 Score: 221 bits (563), Expect = 1.020e-71
Identity = 105/145 (72.41%), Postives = 132/145 (91.03%), Query Frame = 0
Query:    7 GSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDK-NETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVK 150
            G SG+S+TIPVQAGALKKGAHVVIKGF CKIV+YSTSKTGKHGHAKANI G+DIF+G+KYEDISP+SHNM+ PIV+R+D+QL+DID+EGF+T+MDDK NETRSDLR+++  +E+HKK++E+FD GKDL +TVLSA+  EK++  K
Sbjct:    9 GDSGSSDTIPVQAGALKKGAHVVIKGFPCKIVDYSTSKTGKHGHAKANITGIDIFTGKKYEDISPTSHNMLQPIVSRRDFQLIDIDDEGFITVMDDKTNETRSDLRIETDKEEVHKKLKEEFDEGKDLAVTVLSAMKIEKVVTYK 153          
BLAST of Gchil2575.t1 vs. uniprot
Match: A0A7S1T553_9RHOD (Eukaryotic translation initiation factor 5A n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T553_9RHOD)

HSP 1 Score: 217 bits (553), Expect = 3.180e-70
Identity = 105/150 (70.00%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    3 EHDSGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKEV 152
            EH +G SGAS+T+P+QAGALKK A+ V+KGF CKIV+YSTSKTGKHGHAKANI G+DIFSG+KYED+ P+SHNMM PIVTR D QL+DIDEEGFV+LM+DK+E RSDL+LD + DE H+K++  FD GK+L +TVL A+G EKIIA+KE+
Sbjct:    4 EHAAGDSGASDTVPIQAGALKKNAYCVLKGFPCKIVDYSTSKTGKHGHAKANITGIDIFSGKKYEDVCPTSHNMMQPIVTRNDLQLVDIDEEGFVSLMNDKSEMRSDLKLDDS-DETHQKIRTAFDEGKELMVTVLGAMGTEKIIALKEI 152          
BLAST of Gchil2575.t1 vs. uniprot
Match: M2Y544_GALSU (Eukaryotic translation initiation factor 5A n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y544_GALSU)

HSP 1 Score: 197 bits (502), Expect = 1.910e-62
Identity = 90/142 (63.38%), Postives = 122/142 (85.92%), Query Frame = 0
Query:   10 GASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKE 151
            GA+   P+QAG++KK + VV+KGF CK+V+ STSKTGKHGHAKANIVGVDIF+G+KYE++ P+SHN++ P+V RKDYQL+DI+++GFV LMD+ NETRSDL+LD   D++HKK++++F+ GK+L +TVLSA+  EKIIA KE
Sbjct:   11 GAAEATPIQAGSVKKNSFVVLKGFPCKVVDISTSKTGKHGHAKANIVGVDIFTGKKYEEMCPTSHNILQPVVNRKDYQLVDIEDDGFVVLMDENNETRSDLKLDLESDDVHKKIKQEFNEGKELLVTVLSAMKTEKIIASKE 152          
BLAST of Gchil2575.t1 vs. uniprot
Match: A0A7S0MKK1_9CRYP (Eukaryotic translation initiation factor 5A n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MKK1_9CRYP)

HSP 1 Score: 197 bits (501), Expect = 2.890e-62
Identity = 91/150 (60.67%), Postives = 123/150 (82.00%), Query Frame = 0
Query:    3 EHDSGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKEV 152
            + +SG +GAS TIPVQAG++KKG+H+V+KG  CK++E STSKTGKHGHAKA+I G+DIF+G+KY+DISP+SHNMM P+V RK+YQL++I E+ F+TLMDD+   R DL +D   D+ HKK++ DFD+ K+L LTVL  + KEKIIA +E+
Sbjct:    6 DFNSGDAGASETIPVQAGSVKKGSHIVLKGCPCKVIEVSTSKTGKHGHAKASITGIDIFTGKKYQDISPTSHNMMQPVVNRKEYQLVEIAEDSFLTLMDDEGNIREDLSIDINNDDTHKKIKGDFDSNKNLMLTVLKCMQKEKIIASREI 155          
BLAST of Gchil2575.t1 vs. uniprot
Match: A9BK60_HEMAN (Eukaryotic translation initiation factor 5A n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BK60_HEMAN)

HSP 1 Score: 192 bits (487), Expect = 3.900e-60
Identity = 92/151 (60.93%), Postives = 125/151 (82.78%), Query Frame = 0
Query:    3 EHDSGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKEVQ 153
            + +SG +GAS TIP+QAG++KKG HVVIKG  CK++E STSKTGKHGHAKA+I G+DIF+G+KY+DISP+SHN+M PIVTRKDYQLL+I E+GF++LMD++ + R DL   +  D I++K++EDF   K+L +TVL ++ KEKII+ KEV+
Sbjct:    6 DFNSGDAGASETIPIQAGSVKKGIHVVIKGNPCKVIEISTSKTGKHGHAKASITGIDIFTGKKYQDISPTSHNIMQPIVTRKDYQLLEIAEDGFLSLMDEEGQIREDLCFGNDNDTIYEKIKEDFFLNKNLNVTVLKSMQKEKIISYKEVE 156          
BLAST of Gchil2575.t1 vs. uniprot
Match: A0A7J7IKU8_9RHOD (Eukaryotic translation initiation factor 5A n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IKU8_9RHOD)

HSP 1 Score: 192 bits (487), Expect = 4.300e-60
Identity = 92/157 (58.60%), Postives = 122/157 (77.71%), Query Frame = 0
Query:    1 MSEHD------SGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGHAKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLMDDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVKE 151
            M+EH       +G +GAS+T+P+QAG++KKG ++V+KG  CK V+ STSKTGKHGHAKANIVG+DIF+G+KYED++P+SH M  P+V R +YQL+DID E F +LMDDK ETR DL+LD   D +H K++EDFDAGK L + VL A+ +EKI+  KE
Sbjct:    1 MAEHHDLEVLATGDAGASDTVPIQAGSVKKGVYIVLKGQPCKCVDVSTSKTGKHGHAKANIVGLDIFTGKKYEDVAPTSHTMYQPVVVRSEYQLIDIDAENFCSLMDDKGETREDLKLDPDNDPVHAKIKEDFDAGKHLTVVVLKAMKQEKIMQSKE 157          
The following BLAST results are available for this feature:
BLAST of Gchil2575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QK48_CHOCR9.240e-8883.01Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A2V3IEI9_9FLOR8.130e-8281.05Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A5J4YTQ6_PORPP2.860e-7273.97Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A1X6PCW2_PORUM6.290e-7269.80Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A7S0G3H6_9RHOD1.020e-7172.41Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A7S1T553_9RHOD3.180e-7070.00Eukaryotic translation initiation factor 5A n=1 Ta... [more]
M2Y544_GALSU1.910e-6263.38Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A7S0MKK1_9CRYP2.890e-6260.67Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A9BK60_HEMAN3.900e-6060.93Eukaryotic translation initiation factor 5A n=1 Ta... [more]
A0A7J7IKU8_9RHOD4.300e-6058.60Eukaryotic translation initiation factor 5A n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020189Translation elongation factor, IF5A C-terminalSMARTSM01376eIF_5a_2coord: 80..150
e-value: 2.7E-27
score: 106.7
IPR020189Translation elongation factor, IF5A C-terminalPFAMPF01287eIF-5acoord: 80..150
e-value: 6.5E-23
score: 80.6
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..79
e-value: 4.2E-35
score: 121.5
IPR001884Translation elongation factor IF5A-likePIRSFPIRSF003025Transl_init_eIF5Acoord: 1..153
e-value: 7.3E-61
score: 202.2
IPR001884Translation elongation factor IF5A-likeTIGRFAMTIGR00037TIGR00037coord: 12..150
e-value: 1.3E-38
score: 129.7
IPR001884Translation elongation factor IF5A-likePANTHERPTHR11673TRANSLATION INITIATION FACTOR 5A FAMILY MEMBERcoord: 4..152
NoneNo IPR availableGENE3D2.40.50.140coord: 81..153
e-value: 1.9E-24
score: 87.5
NoneNo IPR availablePANTHERPTHR11673:SF6EUKARYOTIC TRANSLATION INITIATION FACTOR 5Acoord: 4..152
NoneNo IPR availableCDDcd04468S1_eIF5Acoord: 81..151
e-value: 1.16691E-27
score: 96.0672
IPR019769Translation elongation factor, IF5A, hypusine sitePROSITEPS00302IF5A_HYPUSINEcoord: 45..52
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 10..88
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 81..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1640697..1641599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2575.t1Gchil2575.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 1640697..1641599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2575.t1 ID=Gchil2575.t1|Name=Gchil2575.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=154bp
MSEHDSGSSGASNTIPVQAGALKKGAHVVIKGFACKIVEYSTSKTGKHGH
AKANIVGVDIFSGRKYEDISPSSHNMMSPIVTRKDYQLLDIDEEGFVTLM
DDKNETRSDLRLDSTVDEIHKKVQEDFDAGKDLFLTVLSALGKEKIIAVK
EVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020189Transl_elong_IF5A_C
IPR014722Rib_L2_dom2
IPR001884IF5A-like
IPR019769Trans_elong_IF5A_hypusine_site
IPR008991Translation_prot_SH3-like_sf
IPR012340NA-bd_OB-fold