Gchil2504.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2504.t1
Unique NameGchil2504.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length301
Homology
BLAST of Gchil2504.t1 vs. uniprot
Match: R7QN10_CHOCR (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR)

HSP 1 Score: 346 bits (887), Expect = 8.620e-116
Identity = 174/293 (59.39%), Postives = 218/293 (74.40%), Query Frame = 0
Query:    7 NSKRKRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRDRRIVPKSAPAHGLCLEQVFYENWD 299
            N  ++R RARVAYDGT +RGWQ+Q    +VQG LE A++R+ G  IRVVGASRTD+GVHARGQA+HFD+P   A ++ +  +KF + LNQ+LP D+R+  L +AP V    +P  K      +  I  RPWH+IY + GKLYTYR S +   DP+ RLYRYHEWRA KFGFSE  LR A+ KFVGSHDFSAFTN++NPP G + PVL+NP+R I SA V+ EG  MYRI+F INGAMY+MIRNI GTIL+VSCG +++S ID  F S+DRR+VPKSAPA GLCLE+V Y+ W+
Sbjct:   50 NPDKQRIRARVAYDGTLYRGWQYQTDQPTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTV----VPC-KVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPPVLSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFASKDRRLVPKSAPAKGLCLEKVIYDEWE 337          
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A2V3J0L1_9FLOR (tRNA pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L1_9FLOR)

HSP 1 Score: 295 bits (755), Expect = 1.380e-97
Identity = 145/198 (73.23%), Postives = 170/198 (85.86%), Query Frame = 0
Query:   11 KRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGI 208
            KRFRARVAYDGT+F+GWQFQ+  RS+QGE+EKAI+R+    +RVVGASRTDSGVHARGQ++HFDVPE  A++EM +M+KF+F LNQ+LP D+ LT LELAP V   AIPMFKQASL T Q+ KLRPWHSI+CSTGKLYTYRFSIA   DPM RLYRYHEWRA++FGFSE  LR AT++F+GSHDFSAFTNAS+PP GI
Sbjct:   16 KRFRARVAYDGTNFKGWQFQQEERSIQGEIEKAIERKLCTRVRVVGASRTDSGVHARGQSIHFDVPEQKAAREMCNMQKFEFTLNQLLPNDVILTKLELAPHVIHTAIPMFKQASLKTIQEPKLRPWHSIFCSTGKLYTYRFSIATNLDPMDRLYRYHEWRASRFGFSEQRLREATERFLGSHDFSAFTNASHPPPGI 213          
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A5J4YW71_PORPP (tRNA pseudouridine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW71_PORPP)

HSP 1 Score: 224 bits (570), Expect = 1.580e-67
Identity = 123/295 (41.69%), Postives = 181/295 (61.36%), Query Frame = 0
Query:   12 RFRARVAYDGTHFRGWQFQKACR-SVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKD-----MKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDD--MYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRDRRIVPKSAPAHGLCLEQVFYENW 298
            R R  VAYDGT FRGWQ+Q   R SVQ  LEK   RR     RVVGASRTD+GVHARGQ  HFD+PE +  ++++      + + +F +N++LP ++++  +E+AP  +   +P  +          +L+PWHSIYC+  K+Y+Y+   A   DP+ RLYR+HE++A      E    AA ++FVG+HDFS+F N  +  E     V+ NPVRT+ S  V+ +  D  +  ++  + GA+YKM+RN+ G  L V+   +    ID    +RDRRI PK+APA GLCL+++FY ++
Sbjct:   97 RCRMTVAYDGTEFRGWQYQINTRNSVQATLEKVFSRRLNGFTRVVGASRTDTGVHARGQVAHFDIPEEIPKEDLQQDDSSGLSRLEFQVNRMLPANLQVLRMEVAPPPSLVKLPSGE----------RLKPWHSIYCAQHKIYSYKIMFATCMDPLERLYRHHEYQACDTDLFE----AALQRFVGTHDFSSFANRLSHGE-----VVRNPVRTVHSVRVIRDERDPRLMTVEVDLQGALYKMVRNMIGAALHVARHDMPPEHIDVLLGARDRRIAPKAAPARGLCLDRIFYADY 372          
BLAST of Gchil2504.t1 vs. uniprot
Match: M2WXR7_GALSU (tRNA pseudouridine synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXR7_GALSU)

HSP 1 Score: 216 bits (549), Expect = 6.570e-65
Identity = 115/287 (40.07%), Postives = 173/287 (60.28%), Query Frame = 0
Query:   12 RFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRDRRIVPKSAPAHGLCLEQVFYENW 298
            R+R RVAYDGT F GWQFQ+  RSVQG LE+ + +R  + IR++GA RTDSGVHARGQ  HFD      +    D    ++ LN++L  DIR+ +L+    ++ D                    WH+I+ +  K+Y+YRFSIA   DP+ R +R+H +R          L  ATK F+G+HDF++F + +      +  +  N  RTI+  D+V+E  D YR+++ +NGA+Y+MIRNI  ++  V+  +L L  +++   ++DRR  PK+APAHGLCLE+V Y+++
Sbjct:   73 RYRLRVAYDGTDFSGWQFQEKRRSVQGVLEQVLSKRLNRSIRIIGAGRTDSGVHARGQVAHFD------TVSFSDCPHLEYTLNRMLSGDIRVYDLQQKEPISSDP----------------RNNWHAIFSARKKVYSYRFSIAKELDPLERRFRFHFYRRCNLE----RLYDATKVFLGTHDFTSFCSRNTE----MKEMEKNMCRTIYRIDLVHESGDSYRLEYELNGALYRMIRNITSSLFFVASDELTLDDLNEILHAKDRRRAPKAAPAHGLCLERVIYDDY 329          
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A8J2SCD1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.770e-54
Identity = 120/304 (39.47%), Postives = 171/304 (56.25%), Query Frame = 0
Query:    1 MDTTSDNSKRKRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRA-GKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHY--PDPMRRLYRYHE-WRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRD-RRIVP-KSAPAHGLCLEQVFYENW 298
            + T +  ++  R+  RVAYDGTHF GWQ Q   R+V+GEL KA   R  G  + ++GASRTDSGVHARGQA H D+PE     E+ D+   +  LN++LP D+R+  +  AP   +                   +PWH+I CSTGK Y+YR + A Y   DP+ RLYR H  +    F     AL+    +F    DF AF N + P +    P+  + +R I S +  +EG   Y +   ++GA+Y+M+RN+ G  +A   G+L+L  +D+    R  RR  P KSAPA GLCLE+VFY+++
Sbjct:    6 LATIAHTTRAARYALRVAYDGTHFNGWQHQPNARTVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPE-----EVADVDLLKHQLNRMLPDDVRINCVREAPPGGE-------------------KPWHAIACSTGKRYSYRMT-ARYGSQDPLERLYRAHVCYEDLDFALLSNALQRCRGRF----DFKAFANNA-PTQN---PLEMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPTKSAPARGLCLEEVFYDDF 276          
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A7J7INL2_9RHOD (tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INL2_9RHOD)

HSP 1 Score: 189 bits (480), Expect = 8.670e-54
Identity = 128/312 (41.03%), Postives = 183/312 (58.65%), Query Frame = 0
Query:    3 TTSDNSKRKRFRARVAYDGTHFRGWQFQKACRS---VQGELEKAIQRRAGKL---IRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTS-QDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAA-KFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVV--NEGD--DMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFES--RDRRIVP---KSAPAHGLCLEQVFYEN 297
            T + +++  R+RA VAYDGT F G+Q Q   R+   +Q +LE  +QRR G      +VVGA RTD+GVHARGQ VHFD+PE +A     +  + Q  +NQ+LP+ I++  LE+APL          Q  L+   Q+ K+ PWH+IY + GKLY YR     + DP+ + Y Y E R+  ++  +E  L+A    FVG+HDF AF + S P +     VL + VRTI    +V  +EG    +++  F ++GA+Y+MIRN+ G  LAV+ G LE   + K  E   R R ++    K APA GLCLEQV+Y +
Sbjct:   65 TRAQHTELVRYRAVVAYDGTDFHGFQRQSNSRAYPTIQSQLELVLQRRLGCCQWRCQVVGAGRTDAGVHARGQVVHFDIPESMAESVAFEPLQLQHAMNQLLPRTIQIRALEVAPL---------PQLCLIRHIQEYKILPWHAIYHARGKLYVYRMFAGQWRDPLHQRYVYSEHRSLPRWTDAESLLQA----FVGTHDFGAFAH-SPPNKADRQRVLHSTVRTIRRIVLVPRDEGGIVPVWQFHFELDGALYRMIRNLIGAFLAVAKGDLEPELVLKALEQGLRGRALIAARVKPAPAQGLCLEQVYYAD 362          
BLAST of Gchil2504.t1 vs. uniprot
Match: D7FS62_ECTSI (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.290e-53
Identity = 115/298 (38.59%), Postives = 175/298 (58.72%), Query Frame = 0
Query:    9 KRKRFRARVAYDGTHFRGWQFQ-KACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTN-----ASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESR--DRRIVPKSAPAHGLCLEQVFYENW 298
            K+ RF +RV YDGT+++G+Q Q     +VQG LEKA+  R    + VV A RTD+GVH+ GQAVHFD+P        +D+ +  + +NQ++P+D+R+ N+ +AP     + P          Q  K  PW S+  + GK Y+YR  +     P+ RLYR H  +AA    +   L     K VG HDF+ F+N     A+   E  +     N VRT++SA++++EG    R+DF ++GA+Y+M+RN+ G +LAV+ G+LE   ID+ F +R  D R++  +APAHGL L+ V Y+ +
Sbjct:  135 KKTRFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNA-----NEDLSQLAYSMNQMMPEDVRVWNMSVAP----PSSPW---------QVEKGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEF--NTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLI-YAAPAHGLTLDTVLYDGY 411          
BLAST of Gchil2504.t1 vs. uniprot
Match: M1VG01_CYAM1 (tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG01_CYAM1)

HSP 1 Score: 183 bits (465), Expect = 2.520e-51
Identity = 117/303 (38.61%), Postives = 180/303 (59.41%), Query Frame = 0
Query:   12 RFRARVAYDGTHFRGWQFQ---KACRSVQGELEKAIQRRAGKL---IRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAK-FGFSEYALRAATKKFVGSHDFSAFTNASNPP-EGIIAPVLANPVRTIWSADVVNEGDD----MYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFE--SRDRRIVP---KSAPAHGLCLEQVFYEN 297
            R+RA VAYDGT F G+Q Q   +A  ++QG LE A+Q+R G      +VVGA RTD+GVHARGQ +HFD+PE  A+    +  + +  LN++LP+ I++  +E++P      +P        +++  +L PWH+IY + GK Y YR S   + DP+   Y Y ++R  + +  ++  L+     FVG+HDF AF  AS+PP +     +  + VRTI    V     D    +++ +F ++GA+Y+MIRNI GT LAV+ G+L+ + +    +  SR R ++    K APAHGLCLE+V+Y +
Sbjct:   99 RYRAVVAYDGTDFHGFQRQAKSRATPTIQGRLEAALQQRLGGYPWHCQVVGAGRTDAGVHARGQVIHFDIPEQKAATSAFEPSRLEHALNRLLPRTIQVRAMEVSPPPAWYLVP--------STRTYQLLPWHAIYRAQGKRYVYRLSAGAWIDPLYHRYAYTDYRQMQHWAVAQQMLQT----FVGTHDFGAF--ASSPPGKADRHQIQRSTVRTIRRISVEPSPVDSIVPVWKFEFELDGALYRMIRNIMGTFLAVARGELDDALVVDALQQGSRGRALIAPRVKPAPAHGLCLERVYYAD 387          
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A7S4MSL3_9STRA (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 8.600e-51
Identity = 118/300 (39.33%), Postives = 171/300 (57.00%), Query Frame = 0
Query:   12 RFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDV--PEL-LASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLR-PWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFF--ESRDRRIVP--------KSAPAHGLCLEQVFYEN 297
            R+RARVAYDGT F GWQ Q   R++QG++E  + RR  + +R+VGA RTD+GVHARGQA HFD+   E+ +A  +  D++  Q  LN +L +DIR+ N   AP            +S    + I+    WH IY +  KLY+YR S A Y DP+ R  R H +           LR A + F G+HDF AF  A +  E     VL   +RT+++ ++V EG+  YR+DF + GA+YKM+RN+ GT LAV+ G+LE   + +F   +S + +++         K A   GL LE V+++ 
Sbjct:   90 RYRARVAYDGTGFNGWQTQAKGRTIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDLRADEIGVADSKCFDLQ-LQRSLNSMLRRDIRVWNTCQAP----------PPSSYKNWEGIERNHKWHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVFDPTNIEL----LRTALQHFEGTHDFRAFAGAIDANERKSGKVLGT-IRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKPAAPEGLTLEHVYFDG 373          
BLAST of Gchil2504.t1 vs. uniprot
Match: L1IVY1_GUITC (tRNA pseudouridine synthase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVY1_GUITC)

HSP 1 Score: 175 bits (444), Expect = 6.130e-50
Identity = 105/253 (41.50%), Postives = 144/253 (56.92%), Query Frame = 0
Query:    5 SDNSKRKRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAV 257
            SD  K  R+R  V YDGT++ G+Q Q    S+QG LE  + R+  +  RVVGA RTDSGVH+RGQ VHFD     +S+ + D++KFQ  +N +LP D+++  LE   +   D +P   +           R WH+IY +  KLY+YR  I    DP+ R  R+HE+R          LR     F G+HDFSAF+N       +      + VRTI+   VV EG+   R+DF ++GA+YKM+RNI GTILAV
Sbjct:   26 SDLDKTFRYRCNVMYDGTNYNGFQLQHYQPSIQGLLETVLSRKLQRRTRVVGAGRTDSGVHSRGQVVHFD-----SSENITDLQKFQHGMNLMLPLDVKICGLE--HVQDLDFVPHLNET----------RKWHAIYSARKKLYSYRIFIGKVQDPITRHSRHHEYRNVDLDL----LREVAAMFEGTHDFSAFSNTRGDNSTM------DTVRTIYRVGVVFEGEGNVRLDFELDGALYKMVRNIVGTILAV 251          
The following BLAST results are available for this feature:
BLAST of Gchil2504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QN10_CHOCR8.620e-11659.39tRNA pseudouridine synthase n=1 Tax=Chondrus crisp... [more]
A0A2V3J0L1_9FLOR1.380e-9773.23tRNA pseudouridine synthase n=1 Tax=Gracilariopsis... [more]
A0A5J4YW71_PORPP1.580e-6741.69tRNA pseudouridine synthase n=1 Tax=Porphyridium p... [more]
M2WXR7_GALSU6.570e-6540.07tRNA pseudouridine synthase n=1 Tax=Galdieria sulp... [more]
A0A8J2SCD1_9STRA1.770e-5439.47Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7J7INL2_9RHOD8.670e-5441.03tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus... [more]
D7FS62_ECTSI2.290e-5338.59tRNA pseudouridine synthase n=2 Tax=Ectocarpus Tax... [more]
M1VG01_CYAM12.520e-5138.61tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzo... [more]
A0A7S4MSL3_9STRA8.600e-5139.33tRNA pseudouridine synthase n=1 Tax=Odontella auri... [more]
L1IVY1_GUITC6.130e-5041.50tRNA pseudouridine synthase n=1 Tax=Guillardia the... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001406Pseudouridine synthase I, TruAPIRSFPIRSF001430PSU-Acoord: 132..299
e-value: 2.7E-23
score: 80.5
coord: 10..113
e-value: 3.1E-26
score: 90.2
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 8..295
IPR001406Pseudouridine synthase I, TruAHAMAPMF_00171TruAcoord: 11..295
score: 28.269279
IPR001406Pseudouridine synthase I, TruACDDcd02570PseudoU_synth_EcTruAcoord: 15..295
e-value: 2.55234E-79
score: 238.912
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 185..295
e-value: 7.3E-19
score: 68.3
coord: 17..114
e-value: 1.2E-6
score: 28.9
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 145..293
e-value: 3.5E-30
score: 106.6
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 9..115
e-value: 2.1E-25
score: 91.0
NoneNo IPR availablePANTHERPTHR11142:SF0TRNA PSEUDOURIDINE SYNTHASE-LIKE 1coord: 8..295
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 10..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1399936..1400838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2504.t1Gchil2504.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 1399936..1400838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2504.t1 ID=Gchil2504.t1|Name=Gchil2504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=301bp
MDTTSDNSKRKRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGK
LIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPK
DIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTY
RFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTN
ASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNI
AGTILAVSCGQLELSAIDKFFESRDRRIVPKSAPAHGLCLEQVFYENWDI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001406PsdUridine_synth_TruA
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR020094TruA/RsuA/RluB/E/F_N
IPR020103PsdUridine_synth_cat_dom_sf