Gchil2504.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil2504.t1 vs. uniprot
Match: R7QN10_CHOCR (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR) HSP 1 Score: 346 bits (887), Expect = 8.620e-116 Identity = 174/293 (59.39%), Postives = 218/293 (74.40%), Query Frame = 0
Query: 7 NSKRKRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRDRRIVPKSAPAHGLCLEQVFYENWD 299
N ++R RARVAYDGT +RGWQ+Q +VQG LE A++R+ G IRVVGASRTD+GVHARGQA+HFD+P A ++ + +KF + LNQ+LP D+R+ L +AP V +P K + I RPWH+IY + GKLYTYR S + DP+ RLYRYHEWRA KFGFSE LR A+ KFVGSHDFSAFTN++NPP G + PVL+NP+R I SA V+ EG MYRI+F INGAMY+MIRNI GTIL+VSCG +++S ID F S+DRR+VPKSAPA GLCLE+V Y+ W+
Sbjct: 50 NPDKQRIRARVAYDGTLYRGWQYQTDQPTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTV----VPC-KVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPPVLSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFASKDRRLVPKSAPAKGLCLEKVIYDEWE 337
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A2V3J0L1_9FLOR (tRNA pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L1_9FLOR) HSP 1 Score: 295 bits (755), Expect = 1.380e-97 Identity = 145/198 (73.23%), Postives = 170/198 (85.86%), Query Frame = 0
Query: 11 KRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGI 208
KRFRARVAYDGT+F+GWQFQ+ RS+QGE+EKAI+R+ +RVVGASRTDSGVHARGQ++HFDVPE A++EM +M+KF+F LNQ+LP D+ LT LELAP V AIPMFKQASL T Q+ KLRPWHSI+CSTGKLYTYRFSIA DPM RLYRYHEWRA++FGFSE LR AT++F+GSHDFSAFTNAS+PP GI
Sbjct: 16 KRFRARVAYDGTNFKGWQFQQEERSIQGEIEKAIERKLCTRVRVVGASRTDSGVHARGQSIHFDVPEQKAAREMCNMQKFEFTLNQLLPNDVILTKLELAPHVIHTAIPMFKQASLKTIQEPKLRPWHSIFCSTGKLYTYRFSIATNLDPMDRLYRYHEWRASRFGFSEQRLREATERFLGSHDFSAFTNASHPPPGI 213
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A5J4YW71_PORPP (tRNA pseudouridine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW71_PORPP) HSP 1 Score: 224 bits (570), Expect = 1.580e-67 Identity = 123/295 (41.69%), Postives = 181/295 (61.36%), Query Frame = 0
Query: 12 RFRARVAYDGTHFRGWQFQKACR-SVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKD-----MKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDD--MYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRDRRIVPKSAPAHGLCLEQVFYENW 298
R R VAYDGT FRGWQ+Q R SVQ LEK RR RVVGASRTD+GVHARGQ HFD+PE + ++++ + + +F +N++LP ++++ +E+AP + +P + +L+PWHSIYC+ K+Y+Y+ A DP+ RLYR+HE++A E AA ++FVG+HDFS+F N + E V+ NPVRT+ S V+ + D + ++ + GA+YKM+RN+ G L V+ + ID +RDRRI PK+APA GLCL+++FY ++
Sbjct: 97 RCRMTVAYDGTEFRGWQYQINTRNSVQATLEKVFSRRLNGFTRVVGASRTDTGVHARGQVAHFDIPEEIPKEDLQQDDSSGLSRLEFQVNRMLPANLQVLRMEVAPPPSLVKLPSGE----------RLKPWHSIYCAQHKIYSYKIMFATCMDPLERLYRHHEYQACDTDLFE----AALQRFVGTHDFSSFANRLSHGE-----VVRNPVRTVHSVRVIRDERDPRLMTVEVDLQGALYKMVRNMIGAALHVARHDMPPEHIDVLLGARDRRIAPKAAPARGLCLDRIFYADY 372
BLAST of Gchil2504.t1 vs. uniprot
Match: M2WXR7_GALSU (tRNA pseudouridine synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXR7_GALSU) HSP 1 Score: 216 bits (549), Expect = 6.570e-65 Identity = 115/287 (40.07%), Postives = 173/287 (60.28%), Query Frame = 0
Query: 12 RFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRDRRIVPKSAPAHGLCLEQVFYENW 298
R+R RVAYDGT F GWQFQ+ RSVQG LE+ + +R + IR++GA RTDSGVHARGQ HFD + D ++ LN++L DIR+ +L+ ++ D WH+I+ + K+Y+YRFSIA DP+ R +R+H +R L ATK F+G+HDF++F + + + + N RTI+ D+V+E D YR+++ +NGA+Y+MIRNI ++ V+ +L L +++ ++DRR PK+APAHGLCLE+V Y+++
Sbjct: 73 RYRLRVAYDGTDFSGWQFQEKRRSVQGVLEQVLSKRLNRSIRIIGAGRTDSGVHARGQVAHFD------TVSFSDCPHLEYTLNRMLSGDIRVYDLQQKEPISSDP----------------RNNWHAIFSARKKVYSYRFSIAKELDPLERRFRFHFYRRCNLE----RLYDATKVFLGTHDFTSFCSRNTE----MKEMEKNMCRTIYRIDLVHESGDSYRLEYELNGALYRMIRNITSSLFFVASDELTLDDLNEILHAKDRRRAPKAAPAHGLCLERVIYDDY 329
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A8J2SCD1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.770e-54 Identity = 120/304 (39.47%), Postives = 171/304 (56.25%), Query Frame = 0
Query: 1 MDTTSDNSKRKRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRA-GKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHY--PDPMRRLYRYHE-WRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESRD-RRIVP-KSAPAHGLCLEQVFYENW 298
+ T + ++ R+ RVAYDGTHF GWQ Q R+V+GEL KA R G + ++GASRTDSGVHARGQA H D+PE E+ D+ + LN++LP D+R+ + AP + +PWH+I CSTGK Y+YR + A Y DP+ RLYR H + F AL+ +F DF AF N + P + P+ + +R I S + +EG Y + ++GA+Y+M+RN+ G +A G+L+L +D+ R RR P KSAPA GLCLE+VFY+++
Sbjct: 6 LATIAHTTRAARYALRVAYDGTHFNGWQHQPNARTVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPE-----EVADVDLLKHQLNRMLPDDVRINCVREAPPGGE-------------------KPWHAIACSTGKRYSYRMT-ARYGSQDPLERLYRAHVCYEDLDFALLSNALQRCRGRF----DFKAFANNA-PTQN---PLEMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPTKSAPARGLCLEEVFYDDF 276
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A7J7INL2_9RHOD (tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INL2_9RHOD) HSP 1 Score: 189 bits (480), Expect = 8.670e-54 Identity = 128/312 (41.03%), Postives = 183/312 (58.65%), Query Frame = 0
Query: 3 TTSDNSKRKRFRARVAYDGTHFRGWQFQKACRS---VQGELEKAIQRRAGKL---IRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTS-QDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAA-KFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVV--NEGD--DMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFES--RDRRIVP---KSAPAHGLCLEQVFYEN 297
T + +++ R+RA VAYDGT F G+Q Q R+ +Q +LE +QRR G +VVGA RTD+GVHARGQ VHFD+PE +A + + Q +NQ+LP+ I++ LE+APL Q L+ Q+ K+ PWH+IY + GKLY YR + DP+ + Y Y E R+ ++ +E L+A FVG+HDF AF + S P + VL + VRTI +V +EG +++ F ++GA+Y+MIRN+ G LAV+ G LE + K E R R ++ K APA GLCLEQV+Y +
Sbjct: 65 TRAQHTELVRYRAVVAYDGTDFHGFQRQSNSRAYPTIQSQLELVLQRRLGCCQWRCQVVGAGRTDAGVHARGQVVHFDIPESMAESVAFEPLQLQHAMNQLLPRTIQIRALEVAPL---------PQLCLIRHIQEYKILPWHAIYHARGKLYVYRMFAGQWRDPLHQRYVYSEHRSLPRWTDAESLLQA----FVGTHDFGAFAH-SPPNKADRQRVLHSTVRTIRRIVLVPRDEGGIVPVWQFHFELDGALYRMIRNLIGAFLAVAKGDLEPELVLKALEQGLRGRALIAARVKPAPAQGLCLEQVYYAD 362
BLAST of Gchil2504.t1 vs. uniprot
Match: D7FS62_ECTSI (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI) HSP 1 Score: 188 bits (478), Expect = 2.290e-53 Identity = 115/298 (38.59%), Postives = 175/298 (58.72%), Query Frame = 0
Query: 9 KRKRFRARVAYDGTHFRGWQFQ-KACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTN-----ASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFESR--DRRIVPKSAPAHGLCLEQVFYENW 298
K+ RF +RV YDGT+++G+Q Q +VQG LEKA+ R + VV A RTD+GVH+ GQAVHFD+P +D+ + + +NQ++P+D+R+ N+ +AP + P Q K PW S+ + GK Y+YR + P+ RLYR H +AA + L K VG HDF+ F+N A+ E + N VRT++SA++++EG R+DF ++GA+Y+M+RN+ G +LAV+ G+LE ID+ F +R D R++ +APAHGL L+ V Y+ +
Sbjct: 135 KKTRFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNA-----NEDLSQLAYSMNQMMPEDVRVWNMSVAP----PSSPW---------QVEKGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEF--NTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLI-YAAPAHGLTLDTVLYDGY 411
BLAST of Gchil2504.t1 vs. uniprot
Match: M1VG01_CYAM1 (tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG01_CYAM1) HSP 1 Score: 183 bits (465), Expect = 2.520e-51 Identity = 117/303 (38.61%), Postives = 180/303 (59.41%), Query Frame = 0
Query: 12 RFRARVAYDGTHFRGWQFQ---KACRSVQGELEKAIQRRAGKL---IRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAK-FGFSEYALRAATKKFVGSHDFSAFTNASNPP-EGIIAPVLANPVRTIWSADVVNEGDD----MYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFFE--SRDRRIVP---KSAPAHGLCLEQVFYEN 297
R+RA VAYDGT F G+Q Q +A ++QG LE A+Q+R G +VVGA RTD+GVHARGQ +HFD+PE A+ + + + LN++LP+ I++ +E++P +P +++ +L PWH+IY + GK Y YR S + DP+ Y Y ++R + + ++ L+ FVG+HDF AF AS+PP + + + VRTI V D +++ +F ++GA+Y+MIRNI GT LAV+ G+L+ + + + SR R ++ K APAHGLCLE+V+Y +
Sbjct: 99 RYRAVVAYDGTDFHGFQRQAKSRATPTIQGRLEAALQQRLGGYPWHCQVVGAGRTDAGVHARGQVIHFDIPEQKAATSAFEPSRLEHALNRLLPRTIQVRAMEVSPPPAWYLVP--------STRTYQLLPWHAIYRAQGKRYVYRLSAGAWIDPLYHRYAYTDYRQMQHWAVAQQMLQT----FVGTHDFGAF--ASSPPGKADRHQIQRSTVRTIRRISVEPSPVDSIVPVWKFEFELDGALYRMIRNIMGTFLAVARGELDDALVVDALQQGSRGRALIAPRVKPAPAHGLCLERVYYAD 387
BLAST of Gchil2504.t1 vs. uniprot
Match: A0A7S4MSL3_9STRA (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA) HSP 1 Score: 181 bits (458), Expect = 8.600e-51 Identity = 118/300 (39.33%), Postives = 171/300 (57.00%), Query Frame = 0
Query: 12 RFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDV--PEL-LASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLR-PWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAVSCGQLELSAIDKFF--ESRDRRIVP--------KSAPAHGLCLEQVFYEN 297
R+RARVAYDGT F GWQ Q R++QG++E + RR + +R+VGA RTD+GVHARGQA HFD+ E+ +A + D++ Q LN +L +DIR+ N AP +S + I+ WH IY + KLY+YR S A Y DP+ R R H + LR A + F G+HDF AF A + E VL +RT+++ ++V EG+ YR+DF + GA+YKM+RN+ GT LAV+ G+LE + +F +S + +++ K A GL LE V+++
Sbjct: 90 RYRARVAYDGTGFNGWQTQAKGRTIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDLRADEIGVADSKCFDLQ-LQRSLNSMLRRDIRVWNTCQAP----------PPSSYKNWEGIERNHKWHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVFDPTNIEL----LRTALQHFEGTHDFRAFAGAIDANERKSGKVLGT-IRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKPAAPEGLTLEHVYFDG 373
BLAST of Gchil2504.t1 vs. uniprot
Match: L1IVY1_GUITC (tRNA pseudouridine synthase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVY1_GUITC) HSP 1 Score: 175 bits (444), Expect = 6.130e-50 Identity = 105/253 (41.50%), Postives = 144/253 (56.92%), Query Frame = 0
Query: 5 SDNSKRKRFRARVAYDGTHFRGWQFQKACRSVQGELEKAIQRRAGKLIRVVGASRTDSGVHARGQAVHFDVPELLASKEMKDMKKFQFVLNQILPKDIRLTNLELAPLVTQDAIPMFKQASLLTSQDIKLRPWHSIYCSTGKLYTYRFSIAHYPDPMRRLYRYHEWRAAKFGFSEYALRAATKKFVGSHDFSAFTNASNPPEGIIAPVLANPVRTIWSADVVNEGDDMYRIDFRINGAMYKMIRNIAGTILAV 257
SD K R+R V YDGT++ G+Q Q S+QG LE + R+ + RVVGA RTDSGVH+RGQ VHFD +S+ + D++KFQ +N +LP D+++ LE + D +P + R WH+IY + KLY+YR I DP+ R R+HE+R LR F G+HDFSAF+N + + VRTI+ VV EG+ R+DF ++GA+YKM+RNI GTILAV
Sbjct: 26 SDLDKTFRYRCNVMYDGTNYNGFQLQHYQPSIQGLLETVLSRKLQRRTRVVGAGRTDSGVHSRGQVVHFD-----SSENITDLQKFQHGMNLMLPLDVKICGLE--HVQDLDFVPHLNET----------RKWHAIYSARKKLYSYRIFIGKVQDPITRHSRHHEYRNVDLDL----LREVAAMFEGTHDFSAFSNTRGDNSTM------DTVRTIYRVGVVFEGEGNVRLDFELDGALYKMVRNIVGTILAV 251 The following BLAST results are available for this feature:
BLAST of Gchil2504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil2504.t1 ID=Gchil2504.t1|Name=Gchil2504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=301bpback to top |