Gchil2484.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2484.t1
Unique Name	Gchil2484.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	116

Homology

[Close]

BLAST of Gchil2484.t1 vs. uniprot
Match: A0A2V3J0X5_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0X5_9FLOR)

HSP 1 Score: 120 bits (300), Expect = 1.440e-32
Identity = 58/114 (50.88%), Postives = 81/114 (71.05%), Query Frame = 0

Query:    2 LLRKFGKFENTTPRNYNEQTNSVPDDEKALIERLSGCHLNQLEMQSVYAADMAANVALGGSDSVLMAFTSLYIIFRIAYIAAHSGPQIVGRCVRSGTFVGCMIVVMLIWGKTVF 115
            LL KFGKF+N  PR +  Q +SVP++++AL+ RL+GCH NQ+EM  VYAA +AAN++L  SD+ L+ FT+LY+ FR  YI  ++ PQ++   +RS TFV CM  V+ IW K  F
Sbjct:   28 LLTKFGKFDNKDPRAHTSQQSSVPEEKRALVTRLAGCHSNQIEMLGVYAAGVAANLSLKKSDTALIVFTALYVGFRALYIIFYAAPQVLRGNLRSITFVACMATVISIWSKAAF 141

The following BLAST results are available for this feature:

BLAST of Gchil2484.t1 vs. uniprot

BLAST of Gchil2484.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0X5_9FLOR	1.440e-32	50.88	Uncharacterized protein n=2 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001129	Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein	PFAM	PF01124	MAPEG	coord: 16..113 e-value: 4.8E-8 score: 33.0
IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain superfamily	GENE3D	1.20.120.550		coord: 2..115 e-value: 7.0E-10 score: 40.8
IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain superfamily	SUPERFAMILY	161084	MAPEG domain-like	coord: 15..110
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 111..115
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 84..88
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 89..110
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..64
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 65..83
None	No IPR available	TMHMM	TMhelix		coord: 54..76
None	No IPR available	TMHMM	TMhelix		coord: 89..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004400_pilon	contig	tig00004400_pilon:1312338..1312685 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2484.t1	Gchil2484.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004400_pilon 1312338..1312685 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2484.t1 ID=Gchil2484.t1|Name=Gchil2484.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=116bp
MLLRKFGKFENTTPRNYNEQTNSVPDDEKALIERLSGCHLNQLEMQSVYA
ADMAANVALGGSDSVLMAFTSLYIIFRIAYIAAHSGPQIVGRCVRSGTFV
GCMIVVMLIWGKTVF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001129	Membr-assoc_MAPEG
IPR023352	MAPEG-like_dom_sf