Gchil2480.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A2V3J0K3_9FLOR (Transcription termination/antitermination protein NusG n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0K3_9FLOR) HSP 1 Score: 672 bits (1734), Expect = 2.700e-229 Identity = 405/820 (49.39%), Postives = 520/820 (63.41%), Query Frame = 0
Query: 1 MTPPEHQRAFISAHARVPLIVRPKAFCARCPYHRRASHRWRCSLQEDTPDEAQPLPSKLPIXXXXXXXXXXXXXXXXPHAQVEGVVSLDSVDANFEEVLSKKWDTLDMFD-GGPHDTRTERQSPKGLFPEEDEQKDPGETGTSAEGSKEESQKKNKRGRKAKKM----------ATEEPQEQTSESEKWSGDARWYFVQVKPGCEQSCAISIRNMSESVEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVRVIEEADLEEYLTQNDTVREKIDTEA-VKLGKESKSSA--EAGIASPEDDLMSLLNDI--EDGSPKSDYTTQYNFGDEEGFAAAESKDDTKETISDALFPGSEDPRKES-KTRKEKKEKKTVNDEELFGDFLFDSGRNDDEGLLSSNDDLASFLNGEDDADLWQLDEGEKRPSSMFDDTDDGFELLSDEKQGASSLIDEAEHPFNSPDDGFVEVDKTRHAKRR--SRPSPAKVKDADV-FSVEGLKGVTISDSADYESSFKDTEVDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAKSHVQDGGAFPSFSRSKDEAVLDEPKKPKAGCSNLPRHMSPWPEEDELPLVPPEDVHRIGGEAMVQDLYAELRRVEKEDDRKYELPPRGYDESEPIIEVAVEAATVDISKPNTREWQECEEFDYEEVKEKSRAVHKARKEARRRR 800
M E +AFI+AHA P + K+ C P+ RR RWRC +Q+ +P E +P P++ P H+Q EGVV DS+D F+E LSKKWDTLD+FD G T+ + ++PK P + +K T ++++SQ +K K + EE + + EKW+ + RWYFVQVKPGCEQSCA+SIRNMSE+VE+A I EVLVPTTKIMRLTKGGKAV KEERFFPGYI+VL++MSR+GY+QILRVPN+QCFMNDPNRDKKK+ PFRPPLPVKDSEMK VF+K++EAESGKPE KT+VRPGD VEITSG ++G KGR++EVKPDLN+VKT++VI+GRI+AVELEFHQV+VIEE +LE YL +N EK + K G++S EAGIAS DDLM +LN+ + + +S T Y F +E+GF +AES DD + P +P + + +T K K D++ D + EGLLSSN+DLASFLNGEDDA+LWQLDEGEK+ +MFDDTDDGFE LSD KQGASSLIDEAEHPFN+PDDGF EV + + K+R S P PA + + F E + ++ D E+S ++ ++K + G F E + P+K GC +LP+ ++ W EEDELPLVPPED R+GGEA++QD+YAELRR E+E DRKYE PP YD SEPI+E E VD++KP+ + E EEF+YEEVK K ++ RK+ARRRR
Sbjct: 1 MASSEPHQAFIAAHALAPTQSQTKSLCPLRPHRRRPHSRWRCVVQDGSPGEQKPSPAEDP----------NPVIETDVHSQTEGVVPFDSMDIGFQEALSKKWDTLDIFDEDGSTATKPKTKTPK--QPADAVEKPIEATVDHLTQNEDQSQPVADSVKKEKPKXXXXXXXXXXSREEEGDTVPQGEKWTSEPRWYFVQVKPGCEQSCAMSIRNMSEAVEEAHILEVLVPTTKIMRLTKGGKAVKKEERFFPGYILVLMAMSRYGYSQILRVPNVQCFMNDPNRDKKKDQPFRPPLPVKDSEMKTVFEKIKEAESGKPEKKTSVRPGDAVEITSGPHQGVKGRISEVKPDLNIVKTDVVIFGRITAVELEFHQVKVIEEEELEAYLMKNAADHEKAKAKPNKKSGRKSSEQPFNEAGIASSADDLMFILNETSKKQTNQESSDTLAYTFDEEDGFESAESIDDQVGEEAPKSVPAQSEPTENNDETMKSK-------DDQFLADLFLGEETSGGEGLLSSNEDLASFLNGEDDANLWQLDEGEKKAPTMFDDTDDGFEPLSDMKQGASSLIDEAEHPFNAPDDGFTEVAEAKSTKKRNVSIPPPADIGSSSTPFFDEVVDEDVALEAVDEENSNGASD------------EHILEAELDAKLEAVMNGTDTEVLSKDMTEYEGTGIDFESIPTEHS-EGPRK--IGCEDLPKFVTSWFEEDELPLVPPEDKARVGGEALLQDVYAELRRCEREGDRKYEFPPADYDLSEPIVEYVEELPQVDLTKPDNSKL-EVEEFNYEEVKRKRNSIRAIRKDARRRR 785
BLAST of Gchil2480.t1 vs. uniprot
Match: R7QD33_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD33_CHOCR) HSP 1 Score: 261 bits (666), Expect = 6.280e-73 Identity = 169/415 (40.72%), Postives = 236/415 (56.87%), Query Frame = 0
Query: 178 WSGDARWYFVQVKPGCEQSCAISIRNMSESVEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVRVIEEA----DLEEYLTQNDTVREKIDTEAVKLGKESKSSA---------EAGIASPEDDLMSLLNDIEDGSPKSDYTTQYNFGDEEGFAAAESKDDTK-ETISDALFPGSEDPRKESKTRKEKKEKKTVNDEELFGD----FLF--------------DS---GRNDDEG--LLSSNDDLASFLNGEDDADLWQLDEGEKRPSSMFDDTDDGFELLSDEKQGASSLID 555
WS + RW+F+QVKPG EQSCAISIRNM++S+E ++ EVLVP TKIMRLTKGG++V KEER FPGYI+VL+ M++ Y + RVPN+Q FM DPNRD+K PFRPPLPV D+EMK+VF+K+ EA S KPE KT++RPGD +E+ SG + GNKGRV VKPDL+V+ L++ GR + VE E Q+ V+++ D + T + + T +L KE+ + + A +ASP DDL +LL+D ++ T+ D F ES + +K +T D+ G R+ K R K +F D F F DS G+ D G L SS+ DL SFL+ + +DLW + ++ P + ++D + G +L D
Sbjct: 235 WSTEPRWFFLQVKPGFEQSCAISIRNMAQSLEALEVKEVLVPVTKIMRLTKGGQSVKKEERIFPGYILVLMVMNQQNYADVQRVPNVQWFMGDPNRDRKTGQPFRPPLPVSDAEMKIVFEKVAEAGSAKPEKKTSIRPGDAIEVLSGPFAGNKGRVLAVKPDLHVISARLMMIGREAPVEFEMDQICVVQDVPEADDSSKERTGSWQAGDAPSTPQSRLNKENANRSVSLFGGPGNTADLASPADDLAALLSD-------DNFETE---DDMSSFFGLESNESSKPKTQGDS---GKVGRRETGKRRSSKASANEFEISSIFRDEGDHFSFLDEEQDQHITTKRQDSSQFGKEDSRGDALKSSDVDLTSFLSTNEGSDLWGATD-KREPEHLSSLSNDEMRTSGALEDGKDNLFD 635
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A7S0ZIK9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIK9_9RHOD) HSP 1 Score: 142 bits (358), Expect = 1.910e-33 Identity = 65/191 (34.03%), Postives = 113/191 (59.16%), Query Frame = 0
Query: 181 DARWYFVQVKPGCEQSCAISIRNMSES--VEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRD-----KKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVR 364
+ WYF+Q K CE + S+ NM+ + + +++ +V+VP +++ K G+ K E FPGY++V +SM + Y +I RVP++QCF+ D NR+ K + + FRPP+P+ E+ +F K++ A + PE+ + PG+ VE+ G ++G++ RVTEV + V EL ++GR S + F ++
Sbjct: 150 EPEWYFLQTKFACENAVKTSLENMANNDRLVGSRLRDVVVPVKPVVKYNKAGRPTQKSELIFPGYVLVYLSMDKHCYNEISRVPHVQCFVGDQNRERELMSKSEKEMFRPPIPLGKEEVAAIFTKIQSASAKSPEIILSFSPGELVEVKDGPFKGSEARVTEVDDEKQKVTVELQVFGRESPAQFGFRSLK 340
BLAST of Gchil2480.t1 vs. uniprot
Match: G1V1S3_9DELT (Transcription termination/antitermination protein NusG n=3 Tax=Bilophila TaxID=35832 RepID=G1V1S3_9DELT) HSP 1 Score: 108 bits (270), Expect = 5.950e-23 Identity = 64/202 (31.68%), Postives = 102/202 (50.50%), Query Frame = 0
Query: 163 MATEEPQEQTSESEKWSGDARWYFVQVKPGCEQSCAISIRNMSESVED-AQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
+A Q + S + +G +RWY V G EQ +I+ M + +D IHEV+VPT K++ L KGG + +F+PGYI++ ++M+ F + + +P + F+ NR P P+KD E + M E +P K + GD V + G + G G V +V D ++ + I+GR + VEL+F QV
Sbjct: 36 LAASTVQTELSAGNQDTGKSRWYIVHTYSGFEQRVEATIKEMMRNAQDNGLIHEVVVPTEKVIELGKGGAKRTTTRKFYPGYIMLRMTMTDFSWHLVQSIPKVTGFVGGKNR----------PAPMKDEEAARILSLM-ETRQEQPRPKFSFERGDDVRVIDGPFGGFNGVVEDVNYDKGKLRVSVSIFGRQTPVELDFIQV 226
BLAST of Gchil2480.t1 vs. uniprot
Match: K9UMG3_CHAP6 (Transcription termination/antitermination protein NusG n=2 Tax=Chamaesiphon TaxID=217161 RepID=K9UMG3_CHAP6) HSP 1 Score: 106 bits (264), Expect = 2.230e-22 Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 0
Query: 182 ARWYFVQVKPGCEQSCAISIRNMSESVEDA-QIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFM-NDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVR 364
ARWY VQV GCE I + S +I+++ +P T +RL K G EE+ FPGY++V +SM + + PN+ F+ ++ R + PLP+ E +F++ E E+ VKT + GD + + SG ++ G V EV P+ + +K L I+GR + VELEF+QV+
Sbjct: 24 ARWYAVQVASGCENRVKIDLNQRIHSFGMGDRIYQIEIPQTPTIRLKKDGTKTPAEEKVFPGYVLVSMSMDDDAWQVVKNTPNVINFVGSEQKRGYGRGRGHVKPLPLSRGEADRIFKQALEQEA---VVKTDLTEGDKIMVMSGPFKDFAGEVVEVSPERSKLKALLSIFGRDTPVELEFNQVQ 205
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A6I5P397_9CYAN (Transcription termination/antitermination protein NusG n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5P397_9CYAN) HSP 1 Score: 106 bits (264), Expect = 2.400e-22 Identity = 57/185 (30.81%), Postives = 106/185 (57.30%), Query Frame = 0
Query: 182 ARWYFVQVKPGCEQSCAISIRNMSESVEDA-QIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMN-DPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVR 364
ARWY VQV GCE+ S+ ++++ A ++ ++ +P T + ++ K G + EE+ FPGY+++ ++M + I P++ F+ + R + P+P+ SE++ +F ++A+ +P VK + GD + + SG ++ +G V EV P+ + +K L I+GR + VELEF+QV+
Sbjct: 27 ARWYAVQVASGCEKKVKASLEQRLKTLDVADKVLQIEIPQTPVKKVRKDGTHTNAEEKVFPGYVLIRMTMDDEAWQVIKNTPHVINFVGAEQRRAYGRGRGHVKPMPLGRSEVERIF---KQAQEQQPVVKVDMEAGDRISVLSGPFKDFEGEVIEVSPERSKLKALLSIFGRDTPVELEFNQVQ 208
BLAST of Gchil2480.t1 vs. uniprot
Match: Q1MPT9_LAWIP (Transcription termination/antitermination protein NusG n=1 Tax=Lawsonia intracellularis (strain PHE/MN1-00) TaxID=363253 RepID=Q1MPT9_LAWIP) HSP 1 Score: 104 bits (259), Expect = 7.240e-22 Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = 0
Query: 180 GDARWYFVQVKPGCEQSCAISIRNMSESVED-AQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
G +RWY V G EQ +I+ M S +D IHEV++PT +++ L KGG + +F+PGYI++ ++M+ + + I +P + F+ NR P P+KD E + M E +P K + GD + + G + G G V +V D ++ + I+GR + VEL+F QV
Sbjct: 18 GKSRWYIVHTYSGFEQRVEATIKEMMRSGQDEGLIHEVVLPTERVVELGKGGLKRTTTRKFYPGYIMLRMTMTDYSWHLIQTIPKVTGFVGGKNR----------PAPMKDEEASKILSLM-ETRQEQPRPKFSFERGDEIRVIDGPFGGFNGIVEDVNYDKGKLRVSVSIFGRQTPVELDFIQV 191
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A0V7ZSY6_9CYAN (Transcription termination/antitermination protein NusG n=2 Tax=Nostocales TaxID=1161 RepID=A0A0V7ZSY6_9CYAN) HSP 1 Score: 101 bits (252), Expect = 9.830e-21 Identity = 60/199 (30.15%), Postives = 108/199 (54.27%), Query Frame = 0
Query: 167 EPQEQTSESEKWSGDARWYFVQVKPGCEQSCAISIRNMSESVEDAQ-IHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMN-DPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
+P+E T + +ARWY VQV GCE+ ++ ++ + A+ I +V +P T +++ K G EE+ FPGY++V ++M + + ++ F+ + R + P+P+ +E++ +F++ E E P VK + GD + + SG ++ +G V EV P+ + +K L I+GR + VELEF+QV
Sbjct: 14 QPEEITETAINALKEARWYAVQVASGCEKRVKTNLEQRIQTFDVAEKIFQVEIPHTPAVKIRKDGSRQQTEEKVFPGYVLVKMTMDDESWQVVRNTSHVINFVGAEQRRGTGRGRGHVKPVPLSHAEVERIFKQTTEQE---PVVKIDMATGDKIVVLSGPFKDFEGEVIEVSPERSKLKALLSIFGRDTPVELEFNQV 209
BLAST of Gchil2480.t1 vs. uniprot
Match: B1XJH3_SYNP2 (Transcription termination/antitermination protein NusG n=5 Tax=unclassified Synechococcus TaxID=2626047 RepID=B1XJH3_SYNP2) HSP 1 Score: 100 bits (249), Expect = 1.830e-20 Identity = 56/183 (30.60%), Postives = 101/183 (55.19%), Query Frame = 0
Query: 183 RWYFVQVKPGCEQSCAISIRNMSESVEDA-QIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMN-DPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
RWY VQV GCEQ ++ +++ A +I +V +P T +++ K G EE+ FPGY+++ +++ + I P++ F+ + R + P+P+ SE++ +F ++A+ +P VK + GD + + SG ++ +G + EV P+ + +K L I+GR + VELEF QV
Sbjct: 17 RWYAVQVASGCEQRVKANLEQRIHTLDVADRIFQVQIPQTPTVKIRKDGSRQHGEEKVFPGYVLIQMTLDDEAWQVIKNTPHVINFVGAEQKRSYGRGRGHVKPVPLSKSEVERIF---KQAQVVEPTVKVDMAIGDKILVLSGPFKDFEGEIIEVSPERSKLKALLSIFGRDTPVELEFTQV 196
BLAST of Gchil2480.t1 vs. uniprot
Match: UPI00036340AD (transcription termination/antitermination protein NusG n=1 Tax=Algicola sagamiensis TaxID=163869 RepID=UPI00036340AD) HSP 1 Score: 97.8 bits (242), Expect = 9.740e-20 Identity = 62/183 (33.88%), Postives = 97/183 (53.01%), Query Frame = 0
Query: 183 RWYFVQVKPGCEQSCAISIRN--MSESVEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
RWY VQ G EQ A S++ +ED + +VLVP +I+ + G K S E +FFPGY++V ++M + + VP + F+ + D+ P P+ D E + + Q++ E + KP KT PG+ V + G + G V EV + + VK ++I+GR + VELEFHQ+
Sbjct: 7 RWYVVQAFSGYEQRVAQSLKEHIKMHGLED-KFGQVLVPIEEIVEMRAGQKRKS-ERKFFPGYVLVEMTMDDEAWHLVRNVPRVMGFIGGTS-DR--------PAPISDREAEAILQRLEE-NTDKPRPKTLFEPGEVVRVIDGPFIDFNGVVEEVDYEKSRVKVSVLIFGRSTPVELEFHQI 177 The following BLAST results are available for this feature:
BLAST of Gchil2480.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil2480.t1 ID=Gchil2480.t1|Name=Gchil2480.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=814bpback to top |