Gchil2480.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2480.t1
Unique NameGchil2480.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length814
Homology
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A2V3J0K3_9FLOR (Transcription termination/antitermination protein NusG n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0K3_9FLOR)

HSP 1 Score: 672 bits (1734), Expect = 2.700e-229
Identity = 405/820 (49.39%), Postives = 520/820 (63.41%), Query Frame = 0
Query:    1 MTPPEHQRAFISAHARVPLIVRPKAFCARCPYHRRASHRWRCSLQEDTPDEAQPLPSKLPIXXXXXXXXXXXXXXXXPHAQVEGVVSLDSVDANFEEVLSKKWDTLDMFD-GGPHDTRTERQSPKGLFPEEDEQKDPGETGTSAEGSKEESQKKNKRGRKAKKM----------ATEEPQEQTSESEKWSGDARWYFVQVKPGCEQSCAISIRNMSESVEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVRVIEEADLEEYLTQNDTVREKIDTEA-VKLGKESKSSA--EAGIASPEDDLMSLLNDI--EDGSPKSDYTTQYNFGDEEGFAAAESKDDTKETISDALFPGSEDPRKES-KTRKEKKEKKTVNDEELFGDFLFDSGRNDDEGLLSSNDDLASFLNGEDDADLWQLDEGEKRPSSMFDDTDDGFELLSDEKQGASSLIDEAEHPFNSPDDGFVEVDKTRHAKRR--SRPSPAKVKDADV-FSVEGLKGVTISDSADYESSFKDTEVDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAKSHVQDGGAFPSFSRSKDEAVLDEPKKPKAGCSNLPRHMSPWPEEDELPLVPPEDVHRIGGEAMVQDLYAELRRVEKEDDRKYELPPRGYDESEPIIEVAVEAATVDISKPNTREWQECEEFDYEEVKEKSRAVHKARKEARRRR 800
            M   E  +AFI+AHA  P   + K+ C   P+ RR   RWRC +Q+ +P E +P P++ P                  H+Q EGVV  DS+D  F+E LSKKWDTLD+FD  G   T+ + ++PK   P +  +K    T      ++++SQ      +K K            + EE  +   + EKW+ + RWYFVQVKPGCEQSCA+SIRNMSE+VE+A I EVLVPTTKIMRLTKGGKAV KEERFFPGYI+VL++MSR+GY+QILRVPN+QCFMNDPNRDKKK+ PFRPPLPVKDSEMK VF+K++EAESGKPE KT+VRPGD VEITSG ++G KGR++EVKPDLN+VKT++VI+GRI+AVELEFHQV+VIEE +LE YL +N    EK   +   K G++S      EAGIAS  DDLM +LN+   +  + +S  T  Y F +E+GF +AES DD     +    P   +P + + +T K K       D++   D       +  EGLLSSN+DLASFLNGEDDA+LWQLDEGEK+  +MFDDTDDGFE LSD KQGASSLIDEAEHPFN+PDDGF EV + +  K+R  S P PA +  +   F  E +      ++ D E+S   ++                                   ++K   +  G    F     E   + P+K   GC +LP+ ++ W EEDELPLVPPED  R+GGEA++QD+YAELRR E+E DRKYE PP  YD SEPI+E   E   VD++KP+  +  E EEF+YEEVK K  ++   RK+ARRRR
Sbjct:    1 MASSEPHQAFIAAHALAPTQSQTKSLCPLRPHRRRPHSRWRCVVQDGSPGEQKPSPAEDP----------NPVIETDVHSQTEGVVPFDSMDIGFQEALSKKWDTLDIFDEDGSTATKPKTKTPK--QPADAVEKPIEATVDHLTQNEDQSQPVADSVKKEKPKXXXXXXXXXXSREEEGDTVPQGEKWTSEPRWYFVQVKPGCEQSCAMSIRNMSEAVEEAHILEVLVPTTKIMRLTKGGKAVKKEERFFPGYILVLMAMSRYGYSQILRVPNVQCFMNDPNRDKKKDQPFRPPLPVKDSEMKTVFEKIKEAESGKPEKKTSVRPGDAVEITSGPHQGVKGRISEVKPDLNIVKTDVVIFGRITAVELEFHQVKVIEEEELEAYLMKNAADHEKAKAKPNKKSGRKSSEQPFNEAGIASSADDLMFILNETSKKQTNQESSDTLAYTFDEEDGFESAESIDDQVGEEAPKSVPAQSEPTENNDETMKSK-------DDQFLADLFLGEETSGGEGLLSSNEDLASFLNGEDDANLWQLDEGEKKAPTMFDDTDDGFEPLSDMKQGASSLIDEAEHPFNAPDDGFTEVAEAKSTKKRNVSIPPPADIGSSSTPFFDEVVDEDVALEAVDEENSNGASD------------EHILEAELDAKLEAVMNGTDTEVLSKDMTEYEGTGIDFESIPTEHS-EGPRK--IGCEDLPKFVTSWFEEDELPLVPPEDKARVGGEALLQDVYAELRRCEREGDRKYEFPPADYDLSEPIVEYVEELPQVDLTKPDNSKL-EVEEFNYEEVKRKRNSIRAIRKDARRRR 785          
BLAST of Gchil2480.t1 vs. uniprot
Match: R7QD33_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD33_CHOCR)

HSP 1 Score: 261 bits (666), Expect = 6.280e-73
Identity = 169/415 (40.72%), Postives = 236/415 (56.87%), Query Frame = 0
Query:  178 WSGDARWYFVQVKPGCEQSCAISIRNMSESVEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVRVIEEA----DLEEYLTQNDTVREKIDTEAVKLGKESKSSA---------EAGIASPEDDLMSLLNDIEDGSPKSDYTTQYNFGDEEGFAAAESKDDTK-ETISDALFPGSEDPRKESKTRKEKKEKKTVNDEELFGD----FLF--------------DS---GRNDDEG--LLSSNDDLASFLNGEDDADLWQLDEGEKRPSSMFDDTDDGFELLSDEKQGASSLID 555
            WS + RW+F+QVKPG EQSCAISIRNM++S+E  ++ EVLVP TKIMRLTKGG++V KEER FPGYI+VL+ M++  Y  + RVPN+Q FM DPNRD+K   PFRPPLPV D+EMK+VF+K+ EA S KPE KT++RPGD +E+ SG + GNKGRV  VKPDL+V+   L++ GR + VE E  Q+ V+++     D  +  T +    +   T   +L KE+ + +          A +ASP DDL +LL+D        ++ T+    D   F   ES + +K +T  D+   G    R+  K R  K          +F D    F F              DS   G+ D  G  L SS+ DL SFL+  + +DLW   + ++ P  +   ++D        + G  +L D
Sbjct:  235 WSTEPRWFFLQVKPGFEQSCAISIRNMAQSLEALEVKEVLVPVTKIMRLTKGGQSVKKEERIFPGYILVLMVMNQQNYADVQRVPNVQWFMGDPNRDRKTGQPFRPPLPVSDAEMKIVFEKVAEAGSAKPEKKTSIRPGDAIEVLSGPFAGNKGRVLAVKPDLHVISARLMMIGREAPVEFEMDQICVVQDVPEADDSSKERTGSWQAGDAPSTPQSRLNKENANRSVSLFGGPGNTADLASPADDLAALLSD-------DNFETE---DDMSSFFGLESNESSKPKTQGDS---GKVGRRETGKRRSSKASANEFEISSIFRDEGDHFSFLDEEQDQHITTKRQDSSQFGKEDSRGDALKSSDVDLTSFLSTNEGSDLWGATD-KREPEHLSSLSNDEMRTSGALEDGKDNLFD 635          
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A7S0ZIK9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIK9_9RHOD)

HSP 1 Score: 142 bits (358), Expect = 1.910e-33
Identity = 65/191 (34.03%), Postives = 113/191 (59.16%), Query Frame = 0
Query:  181 DARWYFVQVKPGCEQSCAISIRNMSES--VEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRD-----KKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVR 364
            +  WYF+Q K  CE +   S+ NM+ +  +  +++ +V+VP   +++  K G+   K E  FPGY++V +SM +  Y +I RVP++QCF+ D NR+     K + + FRPP+P+   E+  +F K++ A +  PE+  +  PG+ VE+  G ++G++ RVTEV  +   V  EL ++GR S  +  F  ++
Sbjct:  150 EPEWYFLQTKFACENAVKTSLENMANNDRLVGSRLRDVVVPVKPVVKYNKAGRPTQKSELIFPGYVLVYLSMDKHCYNEISRVPHVQCFVGDQNRERELMSKSEKEMFRPPIPLGKEEVAAIFTKIQSASAKSPEIILSFSPGELVEVKDGPFKGSEARVTEVDDEKQKVTVELQVFGRESPAQFGFRSLK 340          
BLAST of Gchil2480.t1 vs. uniprot
Match: G1V1S3_9DELT (Transcription termination/antitermination protein NusG n=3 Tax=Bilophila TaxID=35832 RepID=G1V1S3_9DELT)

HSP 1 Score: 108 bits (270), Expect = 5.950e-23
Identity = 64/202 (31.68%), Postives = 102/202 (50.50%), Query Frame = 0
Query:  163 MATEEPQEQTSESEKWSGDARWYFVQVKPGCEQSCAISIRNMSESVED-AQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
            +A    Q + S   + +G +RWY V    G EQ    +I+ M  + +D   IHEV+VPT K++ L KGG   +   +F+PGYI++ ++M+ F +  +  +P +  F+   NR          P P+KD E   +   M E    +P  K +   GD V +  G + G  G V +V  D   ++  + I+GR + VEL+F QV
Sbjct:   36 LAASTVQTELSAGNQDTGKSRWYIVHTYSGFEQRVEATIKEMMRNAQDNGLIHEVVVPTEKVIELGKGGAKRTTTRKFYPGYIMLRMTMTDFSWHLVQSIPKVTGFVGGKNR----------PAPMKDEEAARILSLM-ETRQEQPRPKFSFERGDDVRVIDGPFGGFNGVVEDVNYDKGKLRVSVSIFGRQTPVELDFIQV 226          
BLAST of Gchil2480.t1 vs. uniprot
Match: K9UMG3_CHAP6 (Transcription termination/antitermination protein NusG n=2 Tax=Chamaesiphon TaxID=217161 RepID=K9UMG3_CHAP6)

HSP 1 Score: 106 bits (264), Expect = 2.230e-22
Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 0
Query:  182 ARWYFVQVKPGCEQSCAISIRNMSESVEDA-QIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFM-NDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVR 364
            ARWY VQV  GCE    I +     S     +I+++ +P T  +RL K G     EE+ FPGY++V +SM    +  +   PN+  F+ ++  R   +      PLP+   E   +F++  E E+    VKT +  GD + + SG ++   G V EV P+ + +K  L I+GR + VELEF+QV+
Sbjct:   24 ARWYAVQVASGCENRVKIDLNQRIHSFGMGDRIYQIEIPQTPTIRLKKDGTKTPAEEKVFPGYVLVSMSMDDDAWQVVKNTPNVINFVGSEQKRGYGRGRGHVKPLPLSRGEADRIFKQALEQEA---VVKTDLTEGDKIMVMSGPFKDFAGEVVEVSPERSKLKALLSIFGRDTPVELEFNQVQ 205          
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A6I5P397_9CYAN (Transcription termination/antitermination protein NusG n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5P397_9CYAN)

HSP 1 Score: 106 bits (264), Expect = 2.400e-22
Identity = 57/185 (30.81%), Postives = 106/185 (57.30%), Query Frame = 0
Query:  182 ARWYFVQVKPGCEQSCAISIRNMSESVEDA-QIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMN-DPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQVR 364
            ARWY VQV  GCE+    S+    ++++ A ++ ++ +P T + ++ K G   + EE+ FPGY+++ ++M    +  I   P++  F+  +  R   +      P+P+  SE++ +F   ++A+  +P VK  +  GD + + SG ++  +G V EV P+ + +K  L I+GR + VELEF+QV+
Sbjct:   27 ARWYAVQVASGCEKKVKASLEQRLKTLDVADKVLQIEIPQTPVKKVRKDGTHTNAEEKVFPGYVLIRMTMDDEAWQVIKNTPHVINFVGAEQRRAYGRGRGHVKPMPLGRSEVERIF---KQAQEQQPVVKVDMEAGDRISVLSGPFKDFEGEVIEVSPERSKLKALLSIFGRDTPVELEFNQVQ 208          
BLAST of Gchil2480.t1 vs. uniprot
Match: Q1MPT9_LAWIP (Transcription termination/antitermination protein NusG n=1 Tax=Lawsonia intracellularis (strain PHE/MN1-00) TaxID=363253 RepID=Q1MPT9_LAWIP)

HSP 1 Score: 104 bits (259), Expect = 7.240e-22
Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = 0
Query:  180 GDARWYFVQVKPGCEQSCAISIRNMSESVED-AQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
            G +RWY V    G EQ    +I+ M  S +D   IHEV++PT +++ L KGG   +   +F+PGYI++ ++M+ + +  I  +P +  F+   NR          P P+KD E   +   M E    +P  K +   GD + +  G + G  G V +V  D   ++  + I+GR + VEL+F QV
Sbjct:   18 GKSRWYIVHTYSGFEQRVEATIKEMMRSGQDEGLIHEVVLPTERVVELGKGGLKRTTTRKFYPGYIMLRMTMTDYSWHLIQTIPKVTGFVGGKNR----------PAPMKDEEASKILSLM-ETRQEQPRPKFSFERGDEIRVIDGPFGGFNGIVEDVNYDKGKLRVSVSIFGRQTPVELDFIQV 191          
BLAST of Gchil2480.t1 vs. uniprot
Match: A0A0V7ZSY6_9CYAN (Transcription termination/antitermination protein NusG n=2 Tax=Nostocales TaxID=1161 RepID=A0A0V7ZSY6_9CYAN)

HSP 1 Score: 101 bits (252), Expect = 9.830e-21
Identity = 60/199 (30.15%), Postives = 108/199 (54.27%), Query Frame = 0
Query:  167 EPQEQTSESEKWSGDARWYFVQVKPGCEQSCAISIRNMSESVEDAQ-IHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMN-DPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
            +P+E T  +     +ARWY VQV  GCE+    ++    ++ + A+ I +V +P T  +++ K G     EE+ FPGY++V ++M    +  +    ++  F+  +  R   +      P+P+  +E++ +F++  E E   P VK  +  GD + + SG ++  +G V EV P+ + +K  L I+GR + VELEF+QV
Sbjct:   14 QPEEITETAINALKEARWYAVQVASGCEKRVKTNLEQRIQTFDVAEKIFQVEIPHTPAVKIRKDGSRQQTEEKVFPGYVLVKMTMDDESWQVVRNTSHVINFVGAEQRRGTGRGRGHVKPVPLSHAEVERIFKQTTEQE---PVVKIDMATGDKIVVLSGPFKDFEGEVIEVSPERSKLKALLSIFGRDTPVELEFNQV 209          
BLAST of Gchil2480.t1 vs. uniprot
Match: B1XJH3_SYNP2 (Transcription termination/antitermination protein NusG n=5 Tax=unclassified Synechococcus TaxID=2626047 RepID=B1XJH3_SYNP2)

HSP 1 Score: 100 bits (249), Expect = 1.830e-20
Identity = 56/183 (30.60%), Postives = 101/183 (55.19%), Query Frame = 0
Query:  183 RWYFVQVKPGCEQSCAISIRNMSESVEDA-QIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMN-DPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
            RWY VQV  GCEQ    ++     +++ A +I +V +P T  +++ K G     EE+ FPGY+++ +++    +  I   P++  F+  +  R   +      P+P+  SE++ +F   ++A+  +P VK  +  GD + + SG ++  +G + EV P+ + +K  L I+GR + VELEF QV
Sbjct:   17 RWYAVQVASGCEQRVKANLEQRIHTLDVADRIFQVQIPQTPTVKIRKDGSRQHGEEKVFPGYVLIQMTLDDEAWQVIKNTPHVINFVGAEQKRSYGRGRGHVKPVPLSKSEVERIF---KQAQVVEPTVKVDMAIGDKILVLSGPFKDFEGEIIEVSPERSKLKALLSIFGRDTPVELEFTQV 196          
BLAST of Gchil2480.t1 vs. uniprot
Match: UPI00036340AD (transcription termination/antitermination protein NusG n=1 Tax=Algicola sagamiensis TaxID=163869 RepID=UPI00036340AD)

HSP 1 Score: 97.8 bits (242), Expect = 9.740e-20
Identity = 62/183 (33.88%), Postives = 97/183 (53.01%), Query Frame = 0
Query:  183 RWYFVQVKPGCEQSCAISIRN--MSESVEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSMSRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMREAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIYGRISAVELEFHQV 363
            RWY VQ   G EQ  A S++       +ED +  +VLVP  +I+ +  G K  S E +FFPGY++V ++M    +  +  VP +  F+   + D+        P P+ D E + + Q++ E  + KP  KT   PG+ V +  G +    G V EV  + + VK  ++I+GR + VELEFHQ+
Sbjct:    7 RWYVVQAFSGYEQRVAQSLKEHIKMHGLED-KFGQVLVPIEEIVEMRAGQKRKS-ERKFFPGYVLVEMTMDDEAWHLVRNVPRVMGFIGGTS-DR--------PAPISDREAEAILQRLEE-NTDKPRPKTLFEPGEVVRVIDGPFIDFNGVVEEVDYEKSRVKVSVLIFGRSTPVELEFHQI 177          
The following BLAST results are available for this feature:
BLAST of Gchil2480.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0K3_9FLOR2.700e-22949.39Transcription termination/antitermination protein ... [more]
R7QD33_CHOCR6.280e-7340.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZIK9_9RHOD1.910e-3334.03Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
G1V1S3_9DELT5.950e-2331.68Transcription termination/antitermination protein ... [more]
K9UMG3_CHAP62.230e-2234.05Transcription termination/antitermination protein ... [more]
A0A6I5P397_9CYAN2.400e-2230.81Transcription termination/antitermination protein ... [more]
Q1MPT9_LAWIP7.240e-2231.89Transcription termination/antitermination protein ... [more]
A0A0V7ZSY6_9CYAN9.830e-2130.15Transcription termination/antitermination protein ... [more]
B1XJH3_SYNP21.830e-2030.60Transcription termination/antitermination protein ... [more]
UPI00036340AD9.740e-2033.88transcription termination/antitermination protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006645NusG, N-terminalSMARTSM00738nusgn_4coord: 181..299
e-value: 7.4E-7
score: 38.8
IPR006645NusG, N-terminalPFAMPF02357NusGcoord: 183..292
e-value: 3.3E-9
score: 37.2
IPR005824KOWSMARTSM00739kow_9coord: 312..339
e-value: 4.8E-5
score: 32.8
IPR036735NusG, N-terminal domain superfamilyGENE3D3.30.70.940coord: 179..301
e-value: 4.6E-18
score: 67.2
IPR036735NusG, N-terminal domain superfamilySUPERFAMILY82679N-utilization substance G protein NusG, N-terminal domaincoord: 182..301
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 305..366
e-value: 5.3E-10
score: 41.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 663..707
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 620..640
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 785..813
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 616..643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 559..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..176
NoneNo IPR availableCDDcd06091KOW_NusGcoord: 315..364
e-value: 1.62485E-10
score: 55.156
IPR043425NusG-likePANTHERPTHR30265RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSGcoord: 165..367
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 273..367

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1293439..1295880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2480.t1Gchil2480.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 1293439..1295880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2480.t1 ID=Gchil2480.t1|Name=Gchil2480.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=814bp
MTPPEHQRAFISAHARVPLIVRPKAFCARCPYHRRASHRWRCSLQEDTPD
EAQPLPSKLPIPDEAQPLPSKLPIPDEPHAQVEGVVSLDSVDANFEEVLS
KKWDTLDMFDGGPHDTRTERQSPKGLFPEEDEQKDPGETGTSAEGSKEES
QKKNKRGRKAKKMATEEPQEQTSESEKWSGDARWYFVQVKPGCEQSCAIS
IRNMSESVEDAQIHEVLVPTTKIMRLTKGGKAVSKEERFFPGYIIVLVSM
SRFGYTQILRVPNIQCFMNDPNRDKKKNDPFRPPLPVKDSEMKLVFQKMR
EAESGKPEVKTAVRPGDPVEITSGAYRGNKGRVTEVKPDLNVVKTELVIY
GRISAVELEFHQVRVIEEADLEEYLTQNDTVREKIDTEAVKLGKESKSSA
EAGIASPEDDLMSLLNDIEDGSPKSDYTTQYNFGDEEGFAAAESKDDTKE
TISDALFPGSEDPRKESKTRKEKKEKKTVNDEELFGDFLFDSGRNDDEGL
LSSNDDLASFLNGEDDADLWQLDEGEKRPSSMFDDTDDGFELLSDEKQGA
SSLIDEAEHPFNSPDDGFVEVDKTRHAKRRSRPSPAKVKDADVFSVEGLK
GVTISDSADYESSFKDTEVDFELMDEENEDESELRDGDADFEEELEKVQR
DFEIAKSHVQDGGAFPSFSRSKDEAVLDEPKKPKAGCSNLPRHMSPWPEE
DELPLVPPEDVHRIGGEAMVQDLYAELRRVEKEDDRKYELPPRGYDESEP
IIEVAVEAATVDISKPNTREWQECEEFDYEEVKEKSRAVHKARKEARRRR
QGSTSSDSSKKTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006645NGN_dom
IPR005824KOW
IPR036735NGN_dom_sf
IPR014722Rib_L2_dom2
IPR043425NusG-like
IPR008991Translation_prot_SH3-like_sf