Gchil2421.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2421.t1
Unique Name	Gchil2421.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	177

Homology

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BLAST of Gchil2421.t1 vs. uniprot
Match: A0A2V3ISQ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISQ3_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 1.560e-58
Identity = 108/179 (60.34%), Postives = 136/179 (75.98%), Query Frame = 0

Query:    1 MESEDVAVDKPAIDDAELESLLDAVDCRTQQQQAFHDLLSDGFMSLARERYRDPLSTERLGQLVYDLREDVKSSFQIDVQENEKSGVLSMSKT----IPGPDSSSITTGSTLRRRKTNEGEKASNTRTKRVK-ARPDVANSFMAIPSSEVREAIRCFKLAMDQAVELVNTTNKLAATLD 174
            M SED  ++  +I D  LE LLDAVD RT QQ  FH+L+SDGFMSLARERYRDP STERLG+LVYD REDV S   IDVQE++ SG+++M+KT    + GP+S+S  T +TLRRR+T E EK  N+R K VK +  +V N+FMA+PS E+REAI+CF+LA+D AV+LVNT +KL A LD
Sbjct:    1 MTSEDTGIENLSIRDEGLEELLDAVDRRTHQQDIFHNLISDGFMSLARERYRDPSSTERLGRLVYDEREDVSSDVHIDVQEDQDSGIVAMTKTNGQDVTGPESNS--TEATLRRRRTKESEKVRNSREKPVKLSHKNVKNTFMAMPSKEIREAIKCFRLAIDHAVDLVNTNSKLNAALD 177

The following BLAST results are available for this feature:

BLAST of Gchil2421.t1 vs. uniprot

BLAST of Gchil2421.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISQ3_9FLOR	1.560e-58	60.34	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..130
None	No IPR available	PANTHER	PTHR31996:SF2	COILED-COIL DOMAIN-CONTAINING PROTEIN 115	coord: 10..172
IPR040357	Vma22/CCDC115	PANTHER	PTHR31996	COILED-COIL DOMAIN-CONTAINING PROTEIN 115	coord: 10..172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004400_pilon	contig	tig00004400_pilon:840591..841215 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2421.t1	Gchil2421.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004400_pilon 840591..841215 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2421.t1 ID=Gchil2421.t1|Name=Gchil2421.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=177bp
MESEDVAVDKPAIDDAELESLLDAVDCRTQQQQAFHDLLSDGFMSLARER
YRDPLSTERLGQLVYDLREDVKSSFQIDVQENEKSGVLSMSKTIPGPDSS
SITTGSTLRRRKTNEGEKASNTRTKRVKARPDVANSFMAIPSSEVREAIR
CFKLAMDQAVELVNTTNKLAATLDGQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR040357	Vma22/CCDC115